31 o.set_scoring_function([evr])
Lower bound harmonic function (non-zero when feature < mean)
Strings setup_from_argv(const Strings &argv, std::string description, std::string positional_description, int num_positional)
Various classes to hold sets of particles.
XYZRs create_xyzr_particles(Model *m, unsigned int num, Float radius, Float box_side=10)
Create a set of particles with random coordinates.
Simple conjugate gradients optimizer.
A score on the distance between the surfaces of two spheres.
Return all spatially-proximal pairs of particles (a,b) from the two SingletonContainers A and B...
Class for storing model, its restraints, constraints, and particles.
Store a list of ParticleIndexes.
Basic functionality that is expected to be used by a wide variety of IMP users.
Applies a PairScore to each Pair in a list.