IMP Reference Guide
2.20.2
The Integrative Modeling Platform
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Common functions in anchor calculations. More...
#include <IMP/multifit/multifit_config.h>
#include <IMP/atom/Hierarchy.h>
#include <IMP/statistics/internal/VQClustering.h>
#include <IMP/statistics/internal/DataPoints.h>
#include "DataPointsAssignment.h"
#include "anchors_reader.h"
Go to the source code of this file.
Namespaces | |
IMP | |
Base functionality and abstract base classes for representation, scoring and sampling. | |
IMP::multifit | |
Fitting atomic structures into a cryo-electron microscopy density map. | |
Functions | |
IntsList | IMP::multifit::get_anchor_indices_matching_secondary_structure (const AnchorsData &ad, const atom::SecondaryStructureResidues &ssrs, Float max_rmsd=0.7) |
Get lists of anchors that match a sequence of secondary structures. More... | |
void | IMP::multifit::get_anchors_for_density (em::DensityMap *dmap, int number_of_means, float density_threshold, std::string pdb_filename, std::string cmm_filename, std::string seg_filename, std::string txt_filename) |
Generate anchors in several formats for a given density map. More... | |
AnchorsData | IMP::multifit::molecule2anchors (atom::Hierarchy mh, int k) |
Common functions in anchor calculations.
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Definition in file anchor_utilities.h.