IMP Reference Guide
2.20.2
The Integrative Modeling Platform
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Select a subset of a hierarchy. More...
#include <IMP/atom/atom_config.h>
#include <IMP/atom/internal/SelectionPredicate.h>
#include "Atom.h"
#include "Hierarchy.h"
#include "Residue.h"
#include "element.h"
#include "Representation.h"
#include <IMP/algebra/algebra_config.h>
#include <IMP/InputAdaptor.h>
#include <IMP/core/Typed.h>
#include <IMP/core/XYZR.h>
#include <IMP/display/declare_Geometry.h>
#include <boost/unordered_map.hpp>
Go to the source code of this file.
Classes | |
class | IMP::atom::Selection |
Select hierarchy particles identified by the biological name. More... | |
class | IMP::atom::SelectionGeometry |
Display a Selection. More... | |
Namespaces | |
IMP | |
Base functionality and abstract base classes for representation, scoring and sampling. | |
IMP::atom | |
Functionality for loading, creating, manipulating and scoring atomic structures. | |
Typedefs | |
typedef IMP::Vector< Selection > | IMP::atom::Selections |
Functions | |
Restraint * | IMP::atom::create_connectivity_restraint (const Selections &s, double k, std::string name="Connectivity%1%") |
Create a restraint connecting the selections. More... | |
Restraint * | IMP::atom::create_connectivity_restraint (const Selections &s, double x0, double k, std::string name="Connectivity%1%") |
Create a restraint connecting the selections. More... | |
core::XYZR | IMP::atom::create_cover (const Selection &s, std::string name=std::string()) |
Restraint * | IMP::atom::create_distance_restraint (const Selection &n0, const Selection &n1, double x0, double k, std::string name="Distance%1%") |
Restraint * | IMP::atom::create_excluded_volume_restraint (const Selections &s) |
Create an excluded volume restraint for a list of selections. More... | |
Restraint * | IMP::atom::create_internal_connectivity_restraint (const Selection &s, double k, std::string name="Connectivity%1%") |
Create a restraint connecting the selection. More... | |
Restraint * | IMP::atom::create_internal_connectivity_restraint (const Selection &s, double x0, double k, std::string name="Connectivity%1%") |
Create a restraint connecting the selection. More... | |
Hierarchies | IMP::atom::get_leaves (const Selection &h) |
double | IMP::atom::get_mass (const Selection &s) |
Get the total mass of a hierarchy, in Daltons. More... | |
double | IMP::atom::get_radius_of_gyration (const Selection &s) |
double | IMP::atom::get_surface_area (const Selection &s) |
Get the total surface area of a hierarchy, in square angstroms. More... | |
double | IMP::atom::get_volume (const Selection &s) |
Get the total volume of a hierarchy, in cubic angstroms. More... | |
Select a subset of a hierarchy.
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Definition in file Selection.h.