A member of a rigid body, it has internal (local) coordinates. More...

#include <IMP/core/rigid_bodies.h>

Inheritance diagram for IMP::core::RigidBodyMember:

Public Member Functions
	RigidBodyMember (::IMP::kernel::Model *m,::IMP::kernel::ParticleIndex id)

	RigidBodyMember (const IMP::kernel::ParticleAdaptor &d)

const algebra::Vector3D &	get_internal_coordinates () const
	Return the internal (local) coordinates of this member. More...

algebra::Transformation3D	get_internal_transformation () const

RigidBody	get_rigid_body () const

void	set_coordinates (const algebra::Vector3D &center)
	sets the global coordinates of this member using XYZ::set_coordiantes()

void	set_internal_coordinates (const algebra::Vector3D &v) const
	set the internal (local) coordinates for this member

void	set_internal_transformation (const algebra::Transformation3D &v)

void	show (std::ostream &out=std::cout) const

Public Member Functions inherited from IMP::core::XYZ
	XYZ (::IMP::kernel::Model *m,::IMP::kernel::ParticleIndex id)

	XYZ (const IMP::kernel::ParticleAdaptor &d)

void	add_to_derivative (int i, Float v, DerivativeAccumulator &d)
	Add something to the derivative of the ith coordinate.

void	add_to_derivatives (const algebra::Vector3D &v, DerivativeAccumulator &d)
	Add something to the derivative of the coordinates.

Float	get_coordinate (int i) const
	Get the ith coordinate.

const algebra::Vector3D &	get_coordinates () const
	Convert it to a vector. More...

bool	get_coordinates_are_optimized () const
	Get whether the coordinates are optimized. More...

Float	get_derivative (int i) const
	Get the ith coordinate derivative.

algebra::Vector3D	get_derivatives () const
	Get the vector of derivatives. More...

algebra::Vector3D	get_vector_to (const XYZ &b) const
	Get the vector from this particle to another.

Float	get_x () const

Float	get_y () const

Float	get_z () const

void	set_coordinate (unsigned int i, Float v)
	set the ith coordinate

void	set_coordinates (const algebra::Vector3D &v)
	set all coordinates from a vector

void	set_coordinates_are_optimized (bool tf) const
	Set whether the coordinates are optimized.

void	set_x (Float t)

void	set_y (Float t)

void	set_z (Float t)

void	show (std::ostream &out=std::cout) const

Public Member Functions inherited from IMP::kernel::Decorator
Model *	get_model () const
	Returns the Model containing the particle.

Particle *	get_particle () const

ParticleIndex	get_particle_index () const

	operator Particle * () const

	operator ParticleIndex () const

Particle *	operator-> () const

Static Public Member Functions
static RigidBodyMember	decorate_particle (::IMP::kernel::Particle *p)

static FloatKeys	get_internal_coordinate_keys ()

static bool	get_is_setup (const IMP::kernel::ParticleAdaptor &p)

static bool	get_is_setup (kernel::Model *m, kernel::ParticleIndexAdaptor p)
	return true if it is a rigid member

Static Public Member Functions inherited from IMP::core::XYZ
static XYZ	decorate_particle (::IMP::kernel::Particle *p)

static FloatKey	get_coordinate_key (unsigned int i)

static bool	get_is_setup (const IMP::kernel::ParticleAdaptor &p)

static bool	get_is_setup (kernel::Model *m, kernel::ParticleIndex pi)

static const FloatKeys &	get_xyz_keys ()
	Get a vector containing the keys for x,y,z. More...

static XYZ	setup_particle (IMP::kernel::ParticleAdaptor decorator)

static XYZ	setup_particle (kernel::Model *m, ParticleIndex pi)

static XYZ	setup_particle (IMP::kernel::ParticleAdaptor decorator, algebra::Vector3D v)

static XYZ	setup_particle (kernel::Model *m, ParticleIndex pi, algebra::Vector3D v)

Additional Inherited Members
Protected Member Functions inherited from IMP::kernel::Decorator
	Decorator (Model *m, ParticleIndex pi)

	Decorator (ParticleAdaptor p)

Detailed Description

Definition at line 328 of file rigid_bodies.h.

Member Function Documentation

static RigidBodyMember IMP::core::RigidBodyMember::decorate_particle ( ::IMP::kernel::Particle * p )

static

Deprecated:: As of IMP release 2.1. See the IMP Deprecation Policy for more information about deprecation in IMP. Check explicitly instead.

Definition at line 329 of file rigid_bodies.h.

const algebra::Vector3D& IMP::core::RigidBodyMember::get_internal_coordinates ( ) const

Return the internal (local) coordinates of this member relative to the reference frame of the rigid body that owns it

Definition at line 337 of file rigid_bodies.h.

Here is the call graph for this function:

algebra::Transformation3D IMP::core::RigidBodyMember::get_internal_transformation ( ) const

Return the internal (local) coordinates of this member, assuming it is a rigid body itself Return the internal (local) coordinates of this rigid body relative to the reference frame of the rigid body that owns it

Definition at line 380 of file rigid_bodies.h.

Here is the call graph for this function:

void IMP::core::RigidBodyMember::set_internal_transformation ( const algebra::Transformation3D & v )

Set the internal (local) coordinates of this member, assuming it is a rigid body itself Set the internal (local) coordinates of this rigid body relative to the reference frame of the rigid body that owns it

Definition at line 352 of file rigid_bodies.h.

Here is the call graph for this function:

The documentation for this class was generated from the following file:

rigid_bodies.h

Public Member Functions

Static Public Member Functions

Additional Inherited Members

Detailed Description

Member Function Documentation