11 from __future__
import print_function, division, absolute_import
17 from sys
import version_info
18 if version_info >= (2, 6, 0):
19 def swig_import_helper():
20 from os.path
import dirname
24 fp, pathname, description = imp.find_module(
'_IMP_rotamer', [dirname(__file__)])
30 _mod = imp.load_module(
'_IMP_rotamer', fp, pathname, description)
34 _IMP_rotamer = swig_import_helper()
35 del swig_import_helper
40 _swig_property = property
45 def _swig_setattr_nondynamic(self, class_type, name, value, static=1):
46 if (name ==
"thisown"):
47 return self.this.own(value)
49 if type(value).__name__ ==
'SwigPyObject':
50 self.__dict__[name] = value
52 method = class_type.__swig_setmethods__.get(name,
None)
54 return method(self, value)
56 object.__setattr__(self, name, value)
58 raise AttributeError(
"You cannot add attributes to %s" % self)
61 def _swig_setattr(self, class_type, name, value):
62 return _swig_setattr_nondynamic(self, class_type, name, value, 0)
65 def _swig_getattr_nondynamic(self, class_type, name, static=1):
66 if (name ==
"thisown"):
67 return self.this.own()
68 method = class_type.__swig_getmethods__.get(name,
None)
72 return object.__getattr__(self, name)
74 raise AttributeError(name)
76 def _swig_getattr(self, class_type, name):
77 return _swig_getattr_nondynamic(self, class_type, name, 0)
82 strthis =
"proxy of " + self.this.__repr__()
85 return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
90 except AttributeError:
97 def _swig_setattr_nondynamic_method(set):
98 def set_attr(self, name, value):
99 if (name ==
"thisown"):
100 return self.this.own(value)
101 if hasattr(self, name)
or (name ==
"this"):
102 set(self, name, value)
104 raise AttributeError(
"You cannot add attributes to %s" % self)
110 weakref_proxy = weakref.proxy
112 weakref_proxy =
lambda x: x
115 class IMP_ROTAMER_SwigPyIterator(object):
116 """Proxy of C++ swig::IMP_ROTAMER_SwigPyIterator class"""
117 thisown = _swig_property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
'The membership flag')
119 def __init__(self, *args, **kwargs):
120 raise AttributeError(
"No constructor defined - class is abstract")
121 __repr__ = _swig_repr
122 __swig_destroy__ = _IMP_rotamer.delete_IMP_ROTAMER_SwigPyIterator
123 __del__ =
lambda self:
None
126 """value(IMP_ROTAMER_SwigPyIterator self) -> PyObject *"""
127 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator_value(self)
132 incr(IMP_ROTAMER_SwigPyIterator self, size_t n=1) -> IMP_ROTAMER_SwigPyIterator
133 incr(IMP_ROTAMER_SwigPyIterator self) -> IMP_ROTAMER_SwigPyIterator
135 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator_incr(self, n)
140 decr(IMP_ROTAMER_SwigPyIterator self, size_t n=1) -> IMP_ROTAMER_SwigPyIterator
141 decr(IMP_ROTAMER_SwigPyIterator self) -> IMP_ROTAMER_SwigPyIterator
143 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator_decr(self, n)
146 def distance(self, x):
147 """distance(IMP_ROTAMER_SwigPyIterator self, IMP_ROTAMER_SwigPyIterator x) -> ptrdiff_t"""
148 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator_distance(self, x)
152 """equal(IMP_ROTAMER_SwigPyIterator self, IMP_ROTAMER_SwigPyIterator x) -> bool"""
153 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator_equal(self, x)
157 """copy(IMP_ROTAMER_SwigPyIterator self) -> IMP_ROTAMER_SwigPyIterator"""
158 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator_copy(self)
162 """next(IMP_ROTAMER_SwigPyIterator self) -> PyObject *"""
163 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator_next(self)
167 """__next__(IMP_ROTAMER_SwigPyIterator self) -> PyObject *"""
168 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator___next__(self)
172 """previous(IMP_ROTAMER_SwigPyIterator self) -> PyObject *"""
173 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator_previous(self)
176 def advance(self, n):
177 """advance(IMP_ROTAMER_SwigPyIterator self, ptrdiff_t n) -> IMP_ROTAMER_SwigPyIterator"""
178 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator_advance(self, n)
182 """__eq__(IMP_ROTAMER_SwigPyIterator self, IMP_ROTAMER_SwigPyIterator x) -> bool"""
183 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator___eq__(self, x)
187 """__ne__(IMP_ROTAMER_SwigPyIterator self, IMP_ROTAMER_SwigPyIterator x) -> bool"""
188 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator___ne__(self, x)
191 def __iadd__(self, n):
192 """__iadd__(IMP_ROTAMER_SwigPyIterator self, ptrdiff_t n) -> IMP_ROTAMER_SwigPyIterator"""
193 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator___iadd__(self, n)
196 def __isub__(self, n):
197 """__isub__(IMP_ROTAMER_SwigPyIterator self, ptrdiff_t n) -> IMP_ROTAMER_SwigPyIterator"""
198 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator___isub__(self, n)
201 def __add__(self, n):
202 """__add__(IMP_ROTAMER_SwigPyIterator self, ptrdiff_t n) -> IMP_ROTAMER_SwigPyIterator"""
203 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator___add__(self, n)
206 def __sub__(self, *args):
208 __sub__(IMP_ROTAMER_SwigPyIterator self, ptrdiff_t n) -> IMP_ROTAMER_SwigPyIterator
209 __sub__(IMP_ROTAMER_SwigPyIterator self, IMP_ROTAMER_SwigPyIterator x) -> ptrdiff_t
211 return _IMP_rotamer.IMP_ROTAMER_SwigPyIterator___sub__(self, *args)
215 IMP_ROTAMER_SwigPyIterator_swigregister = _IMP_rotamer.IMP_ROTAMER_SwigPyIterator_swigregister
216 IMP_ROTAMER_SwigPyIterator_swigregister(IMP_ROTAMER_SwigPyIterator)
225 _IMP_rotamer.IMP_DEBUG_swigconstant(_IMP_rotamer)
226 IMP_DEBUG = _IMP_rotamer.IMP_DEBUG
228 _IMP_rotamer.IMP_RELEASE_swigconstant(_IMP_rotamer)
229 IMP_RELEASE = _IMP_rotamer.IMP_RELEASE
231 _IMP_rotamer.IMP_SILENT_swigconstant(_IMP_rotamer)
232 IMP_SILENT = _IMP_rotamer.IMP_SILENT
234 _IMP_rotamer.IMP_PROGRESS_swigconstant(_IMP_rotamer)
235 IMP_PROGRESS = _IMP_rotamer.IMP_PROGRESS
237 _IMP_rotamer.IMP_TERSE_swigconstant(_IMP_rotamer)
238 IMP_TERSE = _IMP_rotamer.IMP_TERSE
240 _IMP_rotamer.IMP_VERBOSE_swigconstant(_IMP_rotamer)
241 IMP_VERBOSE = _IMP_rotamer.IMP_VERBOSE
243 _IMP_rotamer.IMP_MEMORY_swigconstant(_IMP_rotamer)
244 IMP_MEMORY = _IMP_rotamer.IMP_MEMORY
246 _IMP_rotamer.IMP_NONE_swigconstant(_IMP_rotamer)
247 IMP_NONE = _IMP_rotamer.IMP_NONE
249 _IMP_rotamer.IMP_USAGE_swigconstant(_IMP_rotamer)
250 IMP_USAGE = _IMP_rotamer.IMP_USAGE
252 _IMP_rotamer.IMP_INTERNAL_swigconstant(_IMP_rotamer)
253 IMP_INTERNAL = _IMP_rotamer.IMP_INTERNAL
255 _IMP_rotamer.IMP_KERNEL_HAS_LOG4CXX_swigconstant(_IMP_rotamer)
256 IMP_KERNEL_HAS_LOG4CXX = _IMP_rotamer.IMP_KERNEL_HAS_LOG4CXX
258 _IMP_rotamer.IMP_COMPILER_HAS_DEBUG_VECTOR_swigconstant(_IMP_rotamer)
259 IMP_COMPILER_HAS_DEBUG_VECTOR = _IMP_rotamer.IMP_COMPILER_HAS_DEBUG_VECTOR
261 _IMP_rotamer.IMP_COMPILER_HAS_RANDOM_SHUFFLE_swigconstant(_IMP_rotamer)
262 IMP_COMPILER_HAS_RANDOM_SHUFFLE = _IMP_rotamer.IMP_COMPILER_HAS_RANDOM_SHUFFLE
264 _IMP_rotamer.IMP_COMPILER_HAS_THREE_WAY_swigconstant(_IMP_rotamer)
265 IMP_COMPILER_HAS_THREE_WAY = _IMP_rotamer.IMP_COMPILER_HAS_THREE_WAY
267 _IMP_rotamer.IMP_KERNEL_HAS_BOOST_RANDOM_swigconstant(_IMP_rotamer)
268 IMP_KERNEL_HAS_BOOST_RANDOM = _IMP_rotamer.IMP_KERNEL_HAS_BOOST_RANDOM
270 _IMP_rotamer.IMP_KERNEL_HAS_NUMPY_swigconstant(_IMP_rotamer)
271 IMP_KERNEL_HAS_NUMPY = _IMP_rotamer.IMP_KERNEL_HAS_NUMPY
273 _IMP_rotamer.IMP_KERNEL_HAS_GPERFTOOLS_swigconstant(_IMP_rotamer)
274 IMP_KERNEL_HAS_GPERFTOOLS = _IMP_rotamer.IMP_KERNEL_HAS_GPERFTOOLS
276 _IMP_rotamer.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER_swigconstant(_IMP_rotamer)
277 IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER = _IMP_rotamer.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER
279 _IMP_rotamer.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER_swigconstant(_IMP_rotamer)
280 IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER = _IMP_rotamer.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER
282 _IMP_rotamer.IMPKERNEL_SHOW_WARNINGS_swigconstant(_IMP_rotamer)
283 IMPKERNEL_SHOW_WARNINGS = _IMP_rotamer.IMPKERNEL_SHOW_WARNINGS
286 class _DirectorObjects(object):
287 """@internal Simple class to keep references to director objects
288 to prevent premature deletion."""
291 def register(self, obj):
292 """Take a reference to a director object; will only work for
293 refcounted C++ classes"""
294 if hasattr(obj,
'get_ref_count'):
295 self._objects.append(obj)
297 """Only drop our reference and allow cleanup by Python if no other
298 Python references exist (we hold 3 references: one in self._objects,
299 one in x, and one in the argument list for getrefcount) *and* no
300 other C++ references exist (the Python object always holds one)"""
301 objs = [x
for x
in self._objects
if sys.getrefcount(x) > 3 \
302 or x.get_ref_count() > 1]
306 def get_object_count(self):
307 """Get number of director objects (useful for testing only)"""
308 return len(self._objects)
309 _director_objects = _DirectorObjects()
311 class _ostream(object):
312 """Proxy of C++ std::ostream class"""
313 thisown = _swig_property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
'The membership flag')
315 def __init__(self, *args, **kwargs):
316 raise AttributeError(
"No constructor defined")
317 __repr__ = _swig_repr
319 def write(self, osa_buf):
320 """write(_ostream self, char const * osa_buf)"""
321 return _IMP_rotamer._ostream_write(self, osa_buf)
323 _ostream_swigregister = _IMP_rotamer._ostream_swigregister
324 _ostream_swigregister(_ostream)
327 _IMP_rotamer.IMP_HAS_NOEXCEPT_swigconstant(_IMP_rotamer)
328 IMP_HAS_NOEXCEPT = _IMP_rotamer.IMP_HAS_NOEXCEPT
330 _IMP_rotamer.IMP_C_OPEN_BINARY_swigconstant(_IMP_rotamer)
331 IMP_C_OPEN_BINARY = _IMP_rotamer.IMP_C_OPEN_BINARY
334 _IMP_rotamer.IMP_CGAL_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_rotamer)
335 IMP_CGAL_HAS_BOOST_FILESYSTEM = _IMP_rotamer.IMP_CGAL_HAS_BOOST_FILESYSTEM
337 _IMP_rotamer.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_rotamer)
338 IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS = _IMP_rotamer.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS
340 _IMP_rotamer.IMP_CGAL_HAS_BOOST_RANDOM_swigconstant(_IMP_rotamer)
341 IMP_CGAL_HAS_BOOST_RANDOM = _IMP_rotamer.IMP_CGAL_HAS_BOOST_RANDOM
343 _IMP_rotamer.IMP_CGAL_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_rotamer)
344 IMP_CGAL_HAS_BOOST_SERIALIZATION = _IMP_rotamer.IMP_CGAL_HAS_BOOST_SERIALIZATION
346 _IMP_rotamer.IMP_CGAL_HAS_BOOST_SYSTEM_swigconstant(_IMP_rotamer)
347 IMP_CGAL_HAS_BOOST_SYSTEM = _IMP_rotamer.IMP_CGAL_HAS_BOOST_SYSTEM
349 _IMP_rotamer.IMP_CGAL_HAS_NUMPY_swigconstant(_IMP_rotamer)
350 IMP_CGAL_HAS_NUMPY = _IMP_rotamer.IMP_CGAL_HAS_NUMPY
352 _IMP_rotamer.IMPCGAL_SHOW_WARNINGS_swigconstant(_IMP_rotamer)
353 IMPCGAL_SHOW_WARNINGS = _IMP_rotamer.IMPCGAL_SHOW_WARNINGS
356 _IMP_rotamer.IMP_ALGEBRA_HAS_IMP_CGAL_swigconstant(_IMP_rotamer)
357 IMP_ALGEBRA_HAS_IMP_CGAL = _IMP_rotamer.IMP_ALGEBRA_HAS_IMP_CGAL
359 _IMP_rotamer.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_rotamer)
360 IMP_ALGEBRA_HAS_BOOST_FILESYSTEM = _IMP_rotamer.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM
362 _IMP_rotamer.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_rotamer)
363 IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS = _IMP_rotamer.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS
365 _IMP_rotamer.IMP_ALGEBRA_HAS_BOOST_RANDOM_swigconstant(_IMP_rotamer)
366 IMP_ALGEBRA_HAS_BOOST_RANDOM = _IMP_rotamer.IMP_ALGEBRA_HAS_BOOST_RANDOM
368 _IMP_rotamer.IMP_ALGEBRA_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_rotamer)
369 IMP_ALGEBRA_HAS_BOOST_SERIALIZATION = _IMP_rotamer.IMP_ALGEBRA_HAS_BOOST_SERIALIZATION
371 _IMP_rotamer.IMP_ALGEBRA_HAS_BOOST_SYSTEM_swigconstant(_IMP_rotamer)
372 IMP_ALGEBRA_HAS_BOOST_SYSTEM = _IMP_rotamer.IMP_ALGEBRA_HAS_BOOST_SYSTEM
374 _IMP_rotamer.IMP_ALGEBRA_HAS_CGAL_swigconstant(_IMP_rotamer)
375 IMP_ALGEBRA_HAS_CGAL = _IMP_rotamer.IMP_ALGEBRA_HAS_CGAL
377 _IMP_rotamer.IMP_ALGEBRA_HAS_NUMPY_swigconstant(_IMP_rotamer)
378 IMP_ALGEBRA_HAS_NUMPY = _IMP_rotamer.IMP_ALGEBRA_HAS_NUMPY
380 _IMP_rotamer.IMP_ALGEBRA_HAS_ANN_swigconstant(_IMP_rotamer)
381 IMP_ALGEBRA_HAS_ANN = _IMP_rotamer.IMP_ALGEBRA_HAS_ANN
383 _IMP_rotamer.IMPALGEBRA_SHOW_WARNINGS_swigconstant(_IMP_rotamer)
384 IMPALGEBRA_SHOW_WARNINGS = _IMP_rotamer.IMPALGEBRA_SHOW_WARNINGS
387 _IMP_rotamer.IMP_DISPLAY_HAS_IMP_CGAL_swigconstant(_IMP_rotamer)
388 IMP_DISPLAY_HAS_IMP_CGAL = _IMP_rotamer.IMP_DISPLAY_HAS_IMP_CGAL
390 _IMP_rotamer.IMP_DISPLAY_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_rotamer)
391 IMP_DISPLAY_HAS_BOOST_FILESYSTEM = _IMP_rotamer.IMP_DISPLAY_HAS_BOOST_FILESYSTEM
393 _IMP_rotamer.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_rotamer)
394 IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS = _IMP_rotamer.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS
396 _IMP_rotamer.IMP_DISPLAY_HAS_BOOST_RANDOM_swigconstant(_IMP_rotamer)
397 IMP_DISPLAY_HAS_BOOST_RANDOM = _IMP_rotamer.IMP_DISPLAY_HAS_BOOST_RANDOM
399 _IMP_rotamer.IMP_DISPLAY_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_rotamer)
400 IMP_DISPLAY_HAS_BOOST_SERIALIZATION = _IMP_rotamer.IMP_DISPLAY_HAS_BOOST_SERIALIZATION
402 _IMP_rotamer.IMP_DISPLAY_HAS_BOOST_SYSTEM_swigconstant(_IMP_rotamer)
403 IMP_DISPLAY_HAS_BOOST_SYSTEM = _IMP_rotamer.IMP_DISPLAY_HAS_BOOST_SYSTEM
405 _IMP_rotamer.IMP_DISPLAY_HAS_CGAL_swigconstant(_IMP_rotamer)
406 IMP_DISPLAY_HAS_CGAL = _IMP_rotamer.IMP_DISPLAY_HAS_CGAL
408 _IMP_rotamer.IMP_DISPLAY_HAS_NUMPY_swigconstant(_IMP_rotamer)
409 IMP_DISPLAY_HAS_NUMPY = _IMP_rotamer.IMP_DISPLAY_HAS_NUMPY
411 _IMP_rotamer.IMPDISPLAY_SHOW_WARNINGS_swigconstant(_IMP_rotamer)
412 IMPDISPLAY_SHOW_WARNINGS = _IMP_rotamer.IMPDISPLAY_SHOW_WARNINGS
415 _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL_swigconstant(_IMP_rotamer)
416 IMP_SCORE_FUNCTOR_HAS_IMP_CGAL = _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL
418 _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_rotamer)
419 IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM = _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM
421 _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_rotamer)
422 IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS = _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS
424 _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM_swigconstant(_IMP_rotamer)
425 IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM = _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM
427 _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_rotamer)
428 IMP_SCORE_FUNCTOR_HAS_BOOST_SERIALIZATION = _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_BOOST_SERIALIZATION
430 _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM_swigconstant(_IMP_rotamer)
431 IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM = _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM
433 _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_CGAL_swigconstant(_IMP_rotamer)
434 IMP_SCORE_FUNCTOR_HAS_CGAL = _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_CGAL
436 _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_HDF5_swigconstant(_IMP_rotamer)
437 IMP_SCORE_FUNCTOR_HAS_HDF5 = _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_HDF5
439 _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_NUMPY_swigconstant(_IMP_rotamer)
440 IMP_SCORE_FUNCTOR_HAS_NUMPY = _IMP_rotamer.IMP_SCORE_FUNCTOR_HAS_NUMPY
442 _IMP_rotamer.IMPSCOREFUNCTOR_SHOW_WARNINGS_swigconstant(_IMP_rotamer)
443 IMPSCOREFUNCTOR_SHOW_WARNINGS = _IMP_rotamer.IMPSCOREFUNCTOR_SHOW_WARNINGS
446 _IMP_rotamer.IMP_CORE_HAS_IMP_CGAL_swigconstant(_IMP_rotamer)
447 IMP_CORE_HAS_IMP_CGAL = _IMP_rotamer.IMP_CORE_HAS_IMP_CGAL
449 _IMP_rotamer.IMP_CORE_HAS_IMP_KERNEL_swigconstant(_IMP_rotamer)
450 IMP_CORE_HAS_IMP_KERNEL = _IMP_rotamer.IMP_CORE_HAS_IMP_KERNEL
452 _IMP_rotamer.IMP_CORE_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_rotamer)
453 IMP_CORE_HAS_BOOST_FILESYSTEM = _IMP_rotamer.IMP_CORE_HAS_BOOST_FILESYSTEM
455 _IMP_rotamer.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_rotamer)
456 IMP_CORE_HAS_BOOST_PROGRAMOPTIONS = _IMP_rotamer.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS
458 _IMP_rotamer.IMP_CORE_HAS_BOOST_RANDOM_swigconstant(_IMP_rotamer)
459 IMP_CORE_HAS_BOOST_RANDOM = _IMP_rotamer.IMP_CORE_HAS_BOOST_RANDOM
461 _IMP_rotamer.IMP_CORE_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_rotamer)
462 IMP_CORE_HAS_BOOST_SERIALIZATION = _IMP_rotamer.IMP_CORE_HAS_BOOST_SERIALIZATION
464 _IMP_rotamer.IMP_CORE_HAS_BOOST_SYSTEM_swigconstant(_IMP_rotamer)
465 IMP_CORE_HAS_BOOST_SYSTEM = _IMP_rotamer.IMP_CORE_HAS_BOOST_SYSTEM
467 _IMP_rotamer.IMP_CORE_HAS_CGAL_swigconstant(_IMP_rotamer)
468 IMP_CORE_HAS_CGAL = _IMP_rotamer.IMP_CORE_HAS_CGAL
470 _IMP_rotamer.IMP_CORE_HAS_HDF5_swigconstant(_IMP_rotamer)
471 IMP_CORE_HAS_HDF5 = _IMP_rotamer.IMP_CORE_HAS_HDF5
473 _IMP_rotamer.IMP_CORE_HAS_NUMPY_swigconstant(_IMP_rotamer)
474 IMP_CORE_HAS_NUMPY = _IMP_rotamer.IMP_CORE_HAS_NUMPY
476 _IMP_rotamer.IMPCORE_SHOW_WARNINGS_swigconstant(_IMP_rotamer)
477 IMPCORE_SHOW_WARNINGS = _IMP_rotamer.IMPCORE_SHOW_WARNINGS
480 _IMP_rotamer.IMP_CONTAINER_HAS_IMP_ALGEBRA_swigconstant(_IMP_rotamer)
481 IMP_CONTAINER_HAS_IMP_ALGEBRA = _IMP_rotamer.IMP_CONTAINER_HAS_IMP_ALGEBRA
483 _IMP_rotamer.IMP_CONTAINER_HAS_IMP_CGAL_swigconstant(_IMP_rotamer)
484 IMP_CONTAINER_HAS_IMP_CGAL = _IMP_rotamer.IMP_CONTAINER_HAS_IMP_CGAL
486 _IMP_rotamer.IMP_CONTAINER_HAS_IMP_DISPLAY_swigconstant(_IMP_rotamer)
487 IMP_CONTAINER_HAS_IMP_DISPLAY = _IMP_rotamer.IMP_CONTAINER_HAS_IMP_DISPLAY
489 _IMP_rotamer.IMP_CONTAINER_HAS_IMP_KERNEL_swigconstant(_IMP_rotamer)
490 IMP_CONTAINER_HAS_IMP_KERNEL = _IMP_rotamer.IMP_CONTAINER_HAS_IMP_KERNEL
492 _IMP_rotamer.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_rotamer)
493 IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR = _IMP_rotamer.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR
495 _IMP_rotamer.IMP_CONTAINER_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_rotamer)
496 IMP_CONTAINER_HAS_BOOST_FILESYSTEM = _IMP_rotamer.IMP_CONTAINER_HAS_BOOST_FILESYSTEM
498 _IMP_rotamer.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_rotamer)
499 IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS = _IMP_rotamer.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS
501 _IMP_rotamer.IMP_CONTAINER_HAS_BOOST_RANDOM_swigconstant(_IMP_rotamer)
502 IMP_CONTAINER_HAS_BOOST_RANDOM = _IMP_rotamer.IMP_CONTAINER_HAS_BOOST_RANDOM
504 _IMP_rotamer.IMP_CONTAINER_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_rotamer)
505 IMP_CONTAINER_HAS_BOOST_SERIALIZATION = _IMP_rotamer.IMP_CONTAINER_HAS_BOOST_SERIALIZATION
507 _IMP_rotamer.IMP_CONTAINER_HAS_BOOST_SYSTEM_swigconstant(_IMP_rotamer)
508 IMP_CONTAINER_HAS_BOOST_SYSTEM = _IMP_rotamer.IMP_CONTAINER_HAS_BOOST_SYSTEM
510 _IMP_rotamer.IMP_CONTAINER_HAS_CGAL_swigconstant(_IMP_rotamer)
511 IMP_CONTAINER_HAS_CGAL = _IMP_rotamer.IMP_CONTAINER_HAS_CGAL
513 _IMP_rotamer.IMP_CONTAINER_HAS_HDF5_swigconstant(_IMP_rotamer)
514 IMP_CONTAINER_HAS_HDF5 = _IMP_rotamer.IMP_CONTAINER_HAS_HDF5
516 _IMP_rotamer.IMP_CONTAINER_HAS_NUMPY_swigconstant(_IMP_rotamer)
517 IMP_CONTAINER_HAS_NUMPY = _IMP_rotamer.IMP_CONTAINER_HAS_NUMPY
519 _IMP_rotamer.IMP_CONTAINER_HAS_PYTHON_IHM_swigconstant(_IMP_rotamer)
520 IMP_CONTAINER_HAS_PYTHON_IHM = _IMP_rotamer.IMP_CONTAINER_HAS_PYTHON_IHM
522 _IMP_rotamer.IMP_CONTAINER_HAS_GOOGLE_DENSE_HASH_MAP_swigconstant(_IMP_rotamer)
523 IMP_CONTAINER_HAS_GOOGLE_DENSE_HASH_MAP = _IMP_rotamer.IMP_CONTAINER_HAS_GOOGLE_DENSE_HASH_MAP
525 _IMP_rotamer.IMP_CONTAINER_HAS_ROBIN_MAP_swigconstant(_IMP_rotamer)
526 IMP_CONTAINER_HAS_ROBIN_MAP = _IMP_rotamer.IMP_CONTAINER_HAS_ROBIN_MAP
528 _IMP_rotamer.IMPCONTAINER_SHOW_WARNINGS_swigconstant(_IMP_rotamer)
529 IMPCONTAINER_SHOW_WARNINGS = _IMP_rotamer.IMPCONTAINER_SHOW_WARNINGS
532 _IMP_rotamer.IMP_ATOM_HAS_IMP_CGAL_swigconstant(_IMP_rotamer)
533 IMP_ATOM_HAS_IMP_CGAL = _IMP_rotamer.IMP_ATOM_HAS_IMP_CGAL
535 _IMP_rotamer.IMP_ATOM_HAS_IMP_KERNEL_swigconstant(_IMP_rotamer)
536 IMP_ATOM_HAS_IMP_KERNEL = _IMP_rotamer.IMP_ATOM_HAS_IMP_KERNEL
538 _IMP_rotamer.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_rotamer)
539 IMP_ATOM_HAS_IMP_SCORE_FUNCTOR = _IMP_rotamer.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR
541 _IMP_rotamer.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_rotamer)
542 IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS = _IMP_rotamer.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS
544 _IMP_rotamer.IMP_ATOM_HAS_BOOST_RANDOM_swigconstant(_IMP_rotamer)
545 IMP_ATOM_HAS_BOOST_RANDOM = _IMP_rotamer.IMP_ATOM_HAS_BOOST_RANDOM
547 _IMP_rotamer.IMP_ATOM_HAS_BOOST_REGEX_swigconstant(_IMP_rotamer)
548 IMP_ATOM_HAS_BOOST_REGEX = _IMP_rotamer.IMP_ATOM_HAS_BOOST_REGEX
550 _IMP_rotamer.IMP_ATOM_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_rotamer)
551 IMP_ATOM_HAS_BOOST_SERIALIZATION = _IMP_rotamer.IMP_ATOM_HAS_BOOST_SERIALIZATION
553 _IMP_rotamer.IMP_ATOM_HAS_BOOST_SYSTEM_swigconstant(_IMP_rotamer)
554 IMP_ATOM_HAS_BOOST_SYSTEM = _IMP_rotamer.IMP_ATOM_HAS_BOOST_SYSTEM
556 _IMP_rotamer.IMP_ATOM_HAS_CGAL_swigconstant(_IMP_rotamer)
557 IMP_ATOM_HAS_CGAL = _IMP_rotamer.IMP_ATOM_HAS_CGAL
559 _IMP_rotamer.IMP_ATOM_HAS_HDF5_swigconstant(_IMP_rotamer)
560 IMP_ATOM_HAS_HDF5 = _IMP_rotamer.IMP_ATOM_HAS_HDF5
562 _IMP_rotamer.IMP_ATOM_HAS_NUMPY_swigconstant(_IMP_rotamer)
563 IMP_ATOM_HAS_NUMPY = _IMP_rotamer.IMP_ATOM_HAS_NUMPY
565 _IMP_rotamer.IMP_ATOM_HAS_PYTHON_IHM_swigconstant(_IMP_rotamer)
566 IMP_ATOM_HAS_PYTHON_IHM = _IMP_rotamer.IMP_ATOM_HAS_PYTHON_IHM
568 _IMP_rotamer.IMPATOM_SHOW_WARNINGS_swigconstant(_IMP_rotamer)
569 IMPATOM_SHOW_WARNINGS = _IMP_rotamer.IMPATOM_SHOW_WARNINGS
571 _IMP_rotamer.IMP_ATOM_TYPE_INDEX_swigconstant(_IMP_rotamer)
572 IMP_ATOM_TYPE_INDEX = _IMP_rotamer.IMP_ATOM_TYPE_INDEX
574 _IMP_rotamer.IMP_RESIDUE_TYPE_INDEX_swigconstant(_IMP_rotamer)
575 IMP_RESIDUE_TYPE_INDEX = _IMP_rotamer.IMP_RESIDUE_TYPE_INDEX
577 _IMP_rotamer.IMP_HIERARCHY_TYPE_INDEX_swigconstant(_IMP_rotamer)
578 IMP_HIERARCHY_TYPE_INDEX = _IMP_rotamer.IMP_HIERARCHY_TYPE_INDEX
580 _IMP_rotamer.IMP_CHAIN_TYPE_INDEX_swigconstant(_IMP_rotamer)
581 IMP_CHAIN_TYPE_INDEX = _IMP_rotamer.IMP_CHAIN_TYPE_INDEX
584 _IMP_rotamer.IMP_ROTAMER_HAS_IMP_ALGEBRA_swigconstant(_IMP_rotamer)
585 IMP_ROTAMER_HAS_IMP_ALGEBRA = _IMP_rotamer.IMP_ROTAMER_HAS_IMP_ALGEBRA
587 _IMP_rotamer.IMP_ROTAMER_HAS_IMP_CGAL_swigconstant(_IMP_rotamer)
588 IMP_ROTAMER_HAS_IMP_CGAL = _IMP_rotamer.IMP_ROTAMER_HAS_IMP_CGAL
590 _IMP_rotamer.IMP_ROTAMER_HAS_IMP_CONTAINER_swigconstant(_IMP_rotamer)
591 IMP_ROTAMER_HAS_IMP_CONTAINER = _IMP_rotamer.IMP_ROTAMER_HAS_IMP_CONTAINER
593 _IMP_rotamer.IMP_ROTAMER_HAS_IMP_DISPLAY_swigconstant(_IMP_rotamer)
594 IMP_ROTAMER_HAS_IMP_DISPLAY = _IMP_rotamer.IMP_ROTAMER_HAS_IMP_DISPLAY
596 _IMP_rotamer.IMP_ROTAMER_HAS_IMP_KERNEL_swigconstant(_IMP_rotamer)
597 IMP_ROTAMER_HAS_IMP_KERNEL = _IMP_rotamer.IMP_ROTAMER_HAS_IMP_KERNEL
599 _IMP_rotamer.IMP_ROTAMER_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_rotamer)
600 IMP_ROTAMER_HAS_IMP_SCORE_FUNCTOR = _IMP_rotamer.IMP_ROTAMER_HAS_IMP_SCORE_FUNCTOR
602 _IMP_rotamer.IMP_ROTAMER_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_rotamer)
603 IMP_ROTAMER_HAS_BOOST_FILESYSTEM = _IMP_rotamer.IMP_ROTAMER_HAS_BOOST_FILESYSTEM
605 _IMP_rotamer.IMP_ROTAMER_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_rotamer)
606 IMP_ROTAMER_HAS_BOOST_PROGRAMOPTIONS = _IMP_rotamer.IMP_ROTAMER_HAS_BOOST_PROGRAMOPTIONS
608 _IMP_rotamer.IMP_ROTAMER_HAS_BOOST_RANDOM_swigconstant(_IMP_rotamer)
609 IMP_ROTAMER_HAS_BOOST_RANDOM = _IMP_rotamer.IMP_ROTAMER_HAS_BOOST_RANDOM
611 _IMP_rotamer.IMP_ROTAMER_HAS_BOOST_REGEX_swigconstant(_IMP_rotamer)
612 IMP_ROTAMER_HAS_BOOST_REGEX = _IMP_rotamer.IMP_ROTAMER_HAS_BOOST_REGEX
614 _IMP_rotamer.IMP_ROTAMER_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_rotamer)
615 IMP_ROTAMER_HAS_BOOST_SERIALIZATION = _IMP_rotamer.IMP_ROTAMER_HAS_BOOST_SERIALIZATION
617 _IMP_rotamer.IMP_ROTAMER_HAS_BOOST_SYSTEM_swigconstant(_IMP_rotamer)
618 IMP_ROTAMER_HAS_BOOST_SYSTEM = _IMP_rotamer.IMP_ROTAMER_HAS_BOOST_SYSTEM
620 _IMP_rotamer.IMP_ROTAMER_HAS_CGAL_swigconstant(_IMP_rotamer)
621 IMP_ROTAMER_HAS_CGAL = _IMP_rotamer.IMP_ROTAMER_HAS_CGAL
623 _IMP_rotamer.IMP_ROTAMER_HAS_HDF5_swigconstant(_IMP_rotamer)
624 IMP_ROTAMER_HAS_HDF5 = _IMP_rotamer.IMP_ROTAMER_HAS_HDF5
626 _IMP_rotamer.IMP_ROTAMER_HAS_NUMPY_swigconstant(_IMP_rotamer)
627 IMP_ROTAMER_HAS_NUMPY = _IMP_rotamer.IMP_ROTAMER_HAS_NUMPY
629 _IMP_rotamer.IMP_ROTAMER_HAS_PYTHON_IHM_swigconstant(_IMP_rotamer)
630 IMP_ROTAMER_HAS_PYTHON_IHM = _IMP_rotamer.IMP_ROTAMER_HAS_PYTHON_IHM
632 _IMP_rotamer.IMPROTAMER_SHOW_WARNINGS_swigconstant(_IMP_rotamer)
633 IMPROTAMER_SHOW_WARNINGS = _IMP_rotamer.IMPROTAMER_SHOW_WARNINGS
635 RotamerAngleTuples=list
636 _plural_types.append(
"RotamerAngleTuples")
637 _value_types.append(
"RotamerAngleTuple")
641 _plural_types.append(
"ResidueRotamers")
642 _value_types.append(
"ResidueRotamer")
645 _object_types.append(
"RotamerLibrary")
648 def _object_cast_to_RotamerLibrary(o):
649 """_object_cast_to_RotamerLibrary(Object o) -> RotamerLibrary"""
650 return _IMP_rotamer._object_cast_to_RotamerLibrary(o)
652 _object_types.append(
"RotamerCalculator")
655 def _object_cast_to_RotamerCalculator(o):
656 """_object_cast_to_RotamerCalculator(Object o) -> RotamerCalculator"""
657 return _IMP_rotamer._object_cast_to_RotamerCalculator(o)
658 class RotamerAngleTuple(object):
659 """Proxy of C++ IMP::rotamer::RotamerAngleTuple class"""
660 thisown = _swig_property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
'The membership flag')
662 def __init__(self, *args):
664 __init__(IMP::rotamer::RotamerAngleTuple self) -> RotamerAngleTuple
665 __init__(IMP::rotamer::RotamerAngleTuple self, float chi1, float chi2, float chi3, float chi4, float probability) -> RotamerAngleTuple
667 this = _IMP_rotamer.new_RotamerAngleTuple(*args)
669 self.this.append(this)
674 """get_chi1(RotamerAngleTuple self) -> float"""
675 return _IMP_rotamer.RotamerAngleTuple_get_chi1(self)
679 """get_chi2(RotamerAngleTuple self) -> float"""
680 return _IMP_rotamer.RotamerAngleTuple_get_chi2(self)
684 """get_chi3(RotamerAngleTuple self) -> float"""
685 return _IMP_rotamer.RotamerAngleTuple_get_chi3(self)
689 """get_chi4(RotamerAngleTuple self) -> float"""
690 return _IMP_rotamer.RotamerAngleTuple_get_chi4(self)
693 def get_probability(self):
694 """get_probability(RotamerAngleTuple self) -> float"""
695 return _IMP_rotamer.RotamerAngleTuple_get_probability(self)
698 def show(self, *args):
700 show(RotamerAngleTuple self, _ostream out)
701 show(RotamerAngleTuple self)
703 return _IMP_rotamer.RotamerAngleTuple_show(self, *args)
707 """__str__(RotamerAngleTuple self) -> std::string"""
708 return _IMP_rotamer.RotamerAngleTuple___str__(self)
712 """__repr__(RotamerAngleTuple self) -> std::string"""
713 return _IMP_rotamer.RotamerAngleTuple___repr__(self)
716 def _get_as_binary(self):
717 """_get_as_binary(RotamerAngleTuple self) -> PyObject *"""
718 return _IMP_rotamer.RotamerAngleTuple__get_as_binary(self)
721 def _set_from_binary(self, p):
722 """_set_from_binary(RotamerAngleTuple self, PyObject * p)"""
723 return _IMP_rotamer.RotamerAngleTuple__set_from_binary(self, p)
726 def __getstate__(self):
727 p = self._get_as_binary()
728 if len(self.__dict__) > 1:
729 d = self.__dict__.copy()
734 def __setstate__(self, p):
735 if not hasattr(self,
'this'):
737 if isinstance(p, tuple):
739 self.__dict__.update(d)
740 return self._set_from_binary(p)
742 __swig_destroy__ = _IMP_rotamer.delete_RotamerAngleTuple
743 __del__ =
lambda self:
None
744 RotamerAngleTuple_swigregister = _IMP_rotamer.RotamerAngleTuple_swigregister
745 RotamerAngleTuple_swigregister(RotamerAngleTuple)
748 """Proxy of C++ IMP::rotamer::RotamerLibrary class"""
749 thisown = _swig_property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
'The membership flag')
751 def __init__(self, angle_step=10):
753 __init__(IMP::rotamer::RotamerLibrary self, unsigned int angle_step=10) -> RotamerLibrary
754 __init__(IMP::rotamer::RotamerLibrary self) -> RotamerLibrary
756 this = _IMP_rotamer.new_RotamerLibrary(angle_step)
758 self.this.append(this)
762 def get_rotamers(self, residue, phi, psi, probability_thr):
763 """get_rotamers(RotamerLibrary self, ResidueType residue, float phi, float psi, float probability_thr) -> IMP::rotamer::RotamerAngleTuples"""
764 return _IMP_rotamer.RotamerLibrary_get_rotamers(self, residue, phi, psi, probability_thr)
767 def read_library_file(self, lib_file_name):
768 """read_library_file(RotamerLibrary self, std::string const & lib_file_name)"""
769 return _IMP_rotamer.RotamerLibrary_read_library_file(self, lib_file_name)
772 def get_version_info(self):
773 """get_version_info(RotamerLibrary self) -> VersionInfo"""
774 return _IMP_rotamer.RotamerLibrary_get_version_info(self)
778 """__str__(RotamerLibrary self) -> std::string"""
779 return _IMP_rotamer.RotamerLibrary___str__(self)
783 """__repr__(RotamerLibrary self) -> std::string"""
784 return _IMP_rotamer.RotamerLibrary___repr__(self)
789 return _object_cast_to_RotamerLibrary(o)
791 RotamerLibrary_swigregister = _IMP_rotamer.RotamerLibrary_swigregister
792 RotamerLibrary_swigregister(RotamerLibrary)
794 class ResidueRotamer(object):
795 """Proxy of C++ IMP::rotamer::ResidueRotamer class"""
796 thisown = _swig_property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
'The membership flag')
798 def __init__(self, *args):
800 __init__(IMP::rotamer::ResidueRotamer self, ResidueType rt) -> ResidueRotamer
801 __init__(IMP::rotamer::ResidueRotamer self) -> ResidueRotamer
803 this = _IMP_rotamer.new_ResidueRotamer(*args)
805 self.this.append(this)
809 def get_coordinates(self, index, at):
810 """get_coordinates(ResidueRotamer self, unsigned int index, AtomType at) -> Vector3D"""
811 return _IMP_rotamer.ResidueRotamer_get_coordinates(self, index, at)
814 def get_number_of_cases(self, at):
815 """get_number_of_cases(ResidueRotamer self, AtomType at) -> unsigned int"""
816 return _IMP_rotamer.ResidueRotamer_get_number_of_cases(self, at)
819 def get_atom_exists(self, at):
820 """get_atom_exists(ResidueRotamer self, AtomType at) -> bool"""
821 return _IMP_rotamer.ResidueRotamer_get_atom_exists(self, at)
825 """get_size(ResidueRotamer self) -> unsigned int"""
826 return _IMP_rotamer.ResidueRotamer_get_size(self)
829 def get_probability(self, index):
830 """get_probability(ResidueRotamer self, unsigned int index) -> double"""
831 return _IMP_rotamer.ResidueRotamer_get_probability(self, index)
834 def show(self, *args):
836 show(ResidueRotamer self, _ostream out)
837 show(ResidueRotamer self)
839 return _IMP_rotamer.ResidueRotamer_show(self, *args)
843 """__str__(ResidueRotamer self) -> std::string"""
844 return _IMP_rotamer.ResidueRotamer___str__(self)
848 """__repr__(ResidueRotamer self) -> std::string"""
849 return _IMP_rotamer.ResidueRotamer___repr__(self)
851 __swig_destroy__ = _IMP_rotamer.delete_ResidueRotamer
852 __del__ =
lambda self:
None
853 ResidueRotamer_swigregister = _IMP_rotamer.ResidueRotamer_swigregister
854 ResidueRotamer_swigregister(ResidueRotamer)
857 """Proxy of C++ IMP::rotamer::RotamerCalculator class"""
858 thisown = _swig_property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
'The membership flag')
860 def __init__(self, rl):
861 """__init__(IMP::rotamer::RotamerCalculator self, RotamerLibrary rl) -> RotamerCalculator"""
862 this = _IMP_rotamer.new_RotamerCalculator(rl)
864 self.this.append(this)
868 def get_rotamer(self, rd, thr):
869 """get_rotamer(RotamerCalculator self, Residue rd, double thr) -> ResidueRotamer"""
870 return _IMP_rotamer.RotamerCalculator_get_rotamer(self, rd, thr)
873 def get_version_info(self):
874 """get_version_info(RotamerCalculator self) -> VersionInfo"""
875 return _IMP_rotamer.RotamerCalculator_get_version_info(self)
878 def transform(self, protein, score, thr, K, num_iter):
879 """transform(RotamerCalculator self, Hierarchy protein, PairScore score, double thr, double K, int num_iter)"""
880 return _IMP_rotamer.RotamerCalculator_transform(self, protein, score, thr, K, num_iter)
884 """__str__(RotamerCalculator self) -> std::string"""
885 return _IMP_rotamer.RotamerCalculator___str__(self)
889 """__repr__(RotamerCalculator self) -> std::string"""
890 return _IMP_rotamer.RotamerCalculator___repr__(self)
895 return _object_cast_to_RotamerCalculator(o)
897 RotamerCalculator_swigregister = _IMP_rotamer.RotamerCalculator_swigregister
898 RotamerCalculator_swigregister(RotamerCalculator)
902 """get_module_version() -> std::string const"""
903 return _IMP_rotamer.get_module_version()
906 """get_example_path(std::string fname) -> std::string"""
907 return _IMP_rotamer.get_example_path(fname)
910 """get_data_path(std::string fname) -> std::string"""
911 return _IMP_rotamer.get_data_path(fname)
913 from .
import _version_check
Various classes to hold sets of particles.
Make CGAL functionality available to IMP.
Composable functors to implement scores via compile-time composition.
std::string get_data_path(std::string file_name)
Return the full path to one of this module's data files.
std::string get_module_version()
Return the version of this module, as a string.
void transform(Hierarchy h, const algebra::Transformation3D &tr)
Transform a hierarchy. This is aware of rigid bodies.
Common base class for heavy weight IMP objects.
std::string get_example_path(std::string file_name)
Return the full path to one of this module's example files.
Basic functionality that is expected to be used by a wide variety of IMP users.
General purpose algebraic and geometric methods that are expected to be used by a wide variety of IMP...
Output IMP model data in various file formats.
Functionality for loading, creating, manipulating and scoring atomic structures.