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IMP Reference Guide  2.18.0
The Integrative Modeling Platform
version 2.18.0
cnmultifit/__init__.py
1 # This file was automatically generated by SWIG (http://www.swig.org).
2 # Version 3.0.7
3 #
4 # Do not make changes to this file unless you know what you are doing--modify
5 # the SWIG interface file instead.
6 
7 
8 # This wrapper is part of IMP,
9 # Copyright 2007-2022 IMP Inventors. All rights reserved.
10 
11 from __future__ import print_function, division, absolute_import
12 
13 
14 
15 
16 
17 from sys import version_info
18 if version_info >= (2, 6, 0):
19  def swig_import_helper():
20  from os.path import dirname
21  import imp
22  fp = None
23  try:
24  fp, pathname, description = imp.find_module('_IMP_cnmultifit', [dirname(__file__)])
25  except ImportError:
26  import _IMP_cnmultifit
27  return _IMP_cnmultifit
28  if fp is not None:
29  try:
30  _mod = imp.load_module('_IMP_cnmultifit', fp, pathname, description)
31  finally:
32  fp.close()
33  return _mod
34  _IMP_cnmultifit = swig_import_helper()
35  del swig_import_helper
36 else:
37  import _IMP_cnmultifit
38 del version_info
39 try:
40  _swig_property = property
41 except NameError:
42  pass # Python < 2.2 doesn't have 'property'.
43 
44 
45 def _swig_setattr_nondynamic(self, class_type, name, value, static=1):
46  if (name == "thisown"):
47  return self.this.own(value)
48  if (name == "this"):
49  if type(value).__name__ == 'SwigPyObject':
50  self.__dict__[name] = value
51  return
52  method = class_type.__swig_setmethods__.get(name, None)
53  if method:
54  return method(self, value)
55  if (not static):
56  object.__setattr__(self, name, value)
57  else:
58  raise AttributeError("You cannot add attributes to %s" % self)
59 
60 
61 def _swig_setattr(self, class_type, name, value):
62  return _swig_setattr_nondynamic(self, class_type, name, value, 0)
63 
64 
65 def _swig_getattr_nondynamic(self, class_type, name, static=1):
66  if (name == "thisown"):
67  return self.this.own()
68  method = class_type.__swig_getmethods__.get(name, None)
69  if method:
70  return method(self)
71  if (not static):
72  return object.__getattr__(self, name)
73  else:
74  raise AttributeError(name)
75 
76 def _swig_getattr(self, class_type, name):
77  return _swig_getattr_nondynamic(self, class_type, name, 0)
78 
79 
80 def _swig_repr(self):
81  try:
82  strthis = "proxy of " + self.this.__repr__()
83  except:
84  strthis = ""
85  return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
86 
87 try:
88  _object = object
89  _newclass = 1
90 except AttributeError:
91  class _object:
92  pass
93  _newclass = 0
94 
95 
96 
97 def _swig_setattr_nondynamic_method(set):
98  def set_attr(self, name, value):
99  if (name == "thisown"):
100  return self.this.own(value)
101  if hasattr(self, name) or (name == "this"):
102  set(self, name, value)
103  else:
104  raise AttributeError("You cannot add attributes to %s" % self)
105  return set_attr
106 
107 
108 try:
109  import weakref
110  weakref_proxy = weakref.proxy
111 except:
112  weakref_proxy = lambda x: x
113 
114 
115 class IMP_CNMULTIFIT_SwigPyIterator(object):
116  """Proxy of C++ swig::IMP_CNMULTIFIT_SwigPyIterator class"""
117  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
118 
119  def __init__(self, *args, **kwargs):
120  raise AttributeError("No constructor defined - class is abstract")
121  __repr__ = _swig_repr
122  __swig_destroy__ = _IMP_cnmultifit.delete_IMP_CNMULTIFIT_SwigPyIterator
123  __del__ = lambda self: None
124 
125  def value(self):
126  """value(IMP_CNMULTIFIT_SwigPyIterator self) -> PyObject *"""
127  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_value(self)
128 
129 
130  def incr(self, n=1):
131  """
132  incr(IMP_CNMULTIFIT_SwigPyIterator self, size_t n=1) -> IMP_CNMULTIFIT_SwigPyIterator
133  incr(IMP_CNMULTIFIT_SwigPyIterator self) -> IMP_CNMULTIFIT_SwigPyIterator
134  """
135  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_incr(self, n)
136 
137 
138  def decr(self, n=1):
139  """
140  decr(IMP_CNMULTIFIT_SwigPyIterator self, size_t n=1) -> IMP_CNMULTIFIT_SwigPyIterator
141  decr(IMP_CNMULTIFIT_SwigPyIterator self) -> IMP_CNMULTIFIT_SwigPyIterator
142  """
143  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_decr(self, n)
144 
145 
146  def distance(self, x):
147  """distance(IMP_CNMULTIFIT_SwigPyIterator self, IMP_CNMULTIFIT_SwigPyIterator x) -> ptrdiff_t"""
148  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_distance(self, x)
149 
150 
151  def equal(self, x):
152  """equal(IMP_CNMULTIFIT_SwigPyIterator self, IMP_CNMULTIFIT_SwigPyIterator x) -> bool"""
153  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_equal(self, x)
154 
155 
156  def copy(self):
157  """copy(IMP_CNMULTIFIT_SwigPyIterator self) -> IMP_CNMULTIFIT_SwigPyIterator"""
158  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_copy(self)
159 
160 
161  def next(self):
162  """next(IMP_CNMULTIFIT_SwigPyIterator self) -> PyObject *"""
163  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_next(self)
164 
165 
166  def __next__(self):
167  """__next__(IMP_CNMULTIFIT_SwigPyIterator self) -> PyObject *"""
168  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator___next__(self)
169 
170 
171  def previous(self):
172  """previous(IMP_CNMULTIFIT_SwigPyIterator self) -> PyObject *"""
173  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_previous(self)
174 
175 
176  def advance(self, n):
177  """advance(IMP_CNMULTIFIT_SwigPyIterator self, ptrdiff_t n) -> IMP_CNMULTIFIT_SwigPyIterator"""
178  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_advance(self, n)
179 
180 
181  def __eq__(self, x):
182  """__eq__(IMP_CNMULTIFIT_SwigPyIterator self, IMP_CNMULTIFIT_SwigPyIterator x) -> bool"""
183  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator___eq__(self, x)
184 
185 
186  def __ne__(self, x):
187  """__ne__(IMP_CNMULTIFIT_SwigPyIterator self, IMP_CNMULTIFIT_SwigPyIterator x) -> bool"""
188  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator___ne__(self, x)
189 
190 
191  def __iadd__(self, n):
192  """__iadd__(IMP_CNMULTIFIT_SwigPyIterator self, ptrdiff_t n) -> IMP_CNMULTIFIT_SwigPyIterator"""
193  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator___iadd__(self, n)
194 
195 
196  def __isub__(self, n):
197  """__isub__(IMP_CNMULTIFIT_SwigPyIterator self, ptrdiff_t n) -> IMP_CNMULTIFIT_SwigPyIterator"""
198  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator___isub__(self, n)
199 
200 
201  def __add__(self, n):
202  """__add__(IMP_CNMULTIFIT_SwigPyIterator self, ptrdiff_t n) -> IMP_CNMULTIFIT_SwigPyIterator"""
203  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator___add__(self, n)
204 
205 
206  def __sub__(self, *args):
207  """
208  __sub__(IMP_CNMULTIFIT_SwigPyIterator self, ptrdiff_t n) -> IMP_CNMULTIFIT_SwigPyIterator
209  __sub__(IMP_CNMULTIFIT_SwigPyIterator self, IMP_CNMULTIFIT_SwigPyIterator x) -> ptrdiff_t
210  """
211  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator___sub__(self, *args)
212 
213  def __iter__(self):
214  return self
215 IMP_CNMULTIFIT_SwigPyIterator_swigregister = _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_swigregister
216 IMP_CNMULTIFIT_SwigPyIterator_swigregister(IMP_CNMULTIFIT_SwigPyIterator)
217 
218 
219 _value_types=[]
220 _object_types=[]
221 _raii_types=[]
222 _plural_types=[]
223 
224 
225 _IMP_cnmultifit.IMP_DEBUG_swigconstant(_IMP_cnmultifit)
226 IMP_DEBUG = _IMP_cnmultifit.IMP_DEBUG
227 
228 _IMP_cnmultifit.IMP_RELEASE_swigconstant(_IMP_cnmultifit)
229 IMP_RELEASE = _IMP_cnmultifit.IMP_RELEASE
230 
231 _IMP_cnmultifit.IMP_SILENT_swigconstant(_IMP_cnmultifit)
232 IMP_SILENT = _IMP_cnmultifit.IMP_SILENT
233 
234 _IMP_cnmultifit.IMP_PROGRESS_swigconstant(_IMP_cnmultifit)
235 IMP_PROGRESS = _IMP_cnmultifit.IMP_PROGRESS
236 
237 _IMP_cnmultifit.IMP_TERSE_swigconstant(_IMP_cnmultifit)
238 IMP_TERSE = _IMP_cnmultifit.IMP_TERSE
239 
240 _IMP_cnmultifit.IMP_VERBOSE_swigconstant(_IMP_cnmultifit)
241 IMP_VERBOSE = _IMP_cnmultifit.IMP_VERBOSE
242 
243 _IMP_cnmultifit.IMP_MEMORY_swigconstant(_IMP_cnmultifit)
244 IMP_MEMORY = _IMP_cnmultifit.IMP_MEMORY
245 
246 _IMP_cnmultifit.IMP_NONE_swigconstant(_IMP_cnmultifit)
247 IMP_NONE = _IMP_cnmultifit.IMP_NONE
248 
249 _IMP_cnmultifit.IMP_USAGE_swigconstant(_IMP_cnmultifit)
250 IMP_USAGE = _IMP_cnmultifit.IMP_USAGE
251 
252 _IMP_cnmultifit.IMP_INTERNAL_swigconstant(_IMP_cnmultifit)
253 IMP_INTERNAL = _IMP_cnmultifit.IMP_INTERNAL
254 
255 _IMP_cnmultifit.IMP_KERNEL_HAS_LOG4CXX_swigconstant(_IMP_cnmultifit)
256 IMP_KERNEL_HAS_LOG4CXX = _IMP_cnmultifit.IMP_KERNEL_HAS_LOG4CXX
257 
258 _IMP_cnmultifit.IMP_COMPILER_HAS_DEBUG_VECTOR_swigconstant(_IMP_cnmultifit)
259 IMP_COMPILER_HAS_DEBUG_VECTOR = _IMP_cnmultifit.IMP_COMPILER_HAS_DEBUG_VECTOR
260 
261 _IMP_cnmultifit.IMP_COMPILER_HAS_RANDOM_SHUFFLE_swigconstant(_IMP_cnmultifit)
262 IMP_COMPILER_HAS_RANDOM_SHUFFLE = _IMP_cnmultifit.IMP_COMPILER_HAS_RANDOM_SHUFFLE
263 
264 _IMP_cnmultifit.IMP_COMPILER_HAS_THREE_WAY_swigconstant(_IMP_cnmultifit)
265 IMP_COMPILER_HAS_THREE_WAY = _IMP_cnmultifit.IMP_COMPILER_HAS_THREE_WAY
266 
267 _IMP_cnmultifit.IMP_KERNEL_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
268 IMP_KERNEL_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_KERNEL_HAS_BOOST_RANDOM
269 
270 _IMP_cnmultifit.IMP_KERNEL_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
271 IMP_KERNEL_HAS_NUMPY = _IMP_cnmultifit.IMP_KERNEL_HAS_NUMPY
272 
273 _IMP_cnmultifit.IMP_KERNEL_HAS_GPERFTOOLS_swigconstant(_IMP_cnmultifit)
274 IMP_KERNEL_HAS_GPERFTOOLS = _IMP_cnmultifit.IMP_KERNEL_HAS_GPERFTOOLS
275 
276 _IMP_cnmultifit.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER_swigconstant(_IMP_cnmultifit)
277 IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER = _IMP_cnmultifit.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER
278 
279 _IMP_cnmultifit.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER_swigconstant(_IMP_cnmultifit)
280 IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER = _IMP_cnmultifit.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER
281 
282 _IMP_cnmultifit.IMPKERNEL_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
283 IMPKERNEL_SHOW_WARNINGS = _IMP_cnmultifit.IMPKERNEL_SHOW_WARNINGS
284 
285 import sys
286 class _DirectorObjects(object):
287  """@internal Simple class to keep references to director objects
288  to prevent premature deletion."""
289  def __init__(self):
290  self._objects = []
291  def register(self, obj):
292  """Take a reference to a director object; will only work for
293  refcounted C++ classes"""
294  if hasattr(obj, 'get_ref_count'):
295  self._objects.append(obj)
296  def cleanup(self):
297  """Only drop our reference and allow cleanup by Python if no other
298  Python references exist (we hold 3 references: one in self._objects,
299  one in x, and one in the argument list for getrefcount) *and* no
300  other C++ references exist (the Python object always holds one)"""
301  objs = [x for x in self._objects if sys.getrefcount(x) > 3 \
302  or x.get_ref_count() > 1]
303 # Do in two steps so the references are kept until the end of the
304 # function (deleting references may trigger a fresh call to this method)
305  self._objects = objs
306  def get_object_count(self):
307  """Get number of director objects (useful for testing only)"""
308  return len(self._objects)
309 _director_objects = _DirectorObjects()
310 
311 class _ostream(object):
312  """Proxy of C++ std::ostream class"""
313  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
314 
315  def __init__(self, *args, **kwargs):
316  raise AttributeError("No constructor defined")
317  __repr__ = _swig_repr
318 
319  def write(self, osa_buf):
320  """write(_ostream self, char const * osa_buf)"""
321  return _IMP_cnmultifit._ostream_write(self, osa_buf)
322 
323 _ostream_swigregister = _IMP_cnmultifit._ostream_swigregister
324 _ostream_swigregister(_ostream)
325 
326 
327 _IMP_cnmultifit.IMP_HAS_NOEXCEPT_swigconstant(_IMP_cnmultifit)
328 IMP_HAS_NOEXCEPT = _IMP_cnmultifit.IMP_HAS_NOEXCEPT
329 
330 _IMP_cnmultifit.IMP_C_OPEN_BINARY_swigconstant(_IMP_cnmultifit)
331 IMP_C_OPEN_BINARY = _IMP_cnmultifit.IMP_C_OPEN_BINARY
332 import IMP
333 
334 _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
335 IMP_CGAL_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_FILESYSTEM
336 
337 _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
338 IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS
339 
340 _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
341 IMP_CGAL_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_RANDOM
342 
343 _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_cnmultifit)
344 IMP_CGAL_HAS_BOOST_SERIALIZATION = _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_SERIALIZATION
345 
346 _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
347 IMP_CGAL_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_SYSTEM
348 
349 _IMP_cnmultifit.IMP_CGAL_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
350 IMP_CGAL_HAS_NUMPY = _IMP_cnmultifit.IMP_CGAL_HAS_NUMPY
351 
352 _IMP_cnmultifit.IMPCGAL_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
353 IMPCGAL_SHOW_WARNINGS = _IMP_cnmultifit.IMPCGAL_SHOW_WARNINGS
354 import IMP.cgal
355 
356 _IMP_cnmultifit.IMP_ALGEBRA_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
357 IMP_ALGEBRA_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_ALGEBRA_HAS_IMP_CGAL
358 
359 _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
360 IMP_ALGEBRA_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM
361 
362 _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
363 IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS
364 
365 _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
366 IMP_ALGEBRA_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_RANDOM
367 
368 _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_cnmultifit)
369 IMP_ALGEBRA_HAS_BOOST_SERIALIZATION = _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_SERIALIZATION
370 
371 _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
372 IMP_ALGEBRA_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_SYSTEM
373 
374 _IMP_cnmultifit.IMP_ALGEBRA_HAS_CGAL_swigconstant(_IMP_cnmultifit)
375 IMP_ALGEBRA_HAS_CGAL = _IMP_cnmultifit.IMP_ALGEBRA_HAS_CGAL
376 
377 _IMP_cnmultifit.IMP_ALGEBRA_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
378 IMP_ALGEBRA_HAS_NUMPY = _IMP_cnmultifit.IMP_ALGEBRA_HAS_NUMPY
379 
380 _IMP_cnmultifit.IMP_ALGEBRA_HAS_ANN_swigconstant(_IMP_cnmultifit)
381 IMP_ALGEBRA_HAS_ANN = _IMP_cnmultifit.IMP_ALGEBRA_HAS_ANN
382 
383 _IMP_cnmultifit.IMPALGEBRA_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
384 IMPALGEBRA_SHOW_WARNINGS = _IMP_cnmultifit.IMPALGEBRA_SHOW_WARNINGS
385 import IMP.algebra
386 
387 _IMP_cnmultifit.IMP_DISPLAY_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
388 IMP_DISPLAY_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_DISPLAY_HAS_IMP_CGAL
389 
390 _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
391 IMP_DISPLAY_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_FILESYSTEM
392 
393 _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
394 IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS
395 
396 _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
397 IMP_DISPLAY_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_RANDOM
398 
399 _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_cnmultifit)
400 IMP_DISPLAY_HAS_BOOST_SERIALIZATION = _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_SERIALIZATION
401 
402 _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
403 IMP_DISPLAY_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_SYSTEM
404 
405 _IMP_cnmultifit.IMP_DISPLAY_HAS_CGAL_swigconstant(_IMP_cnmultifit)
406 IMP_DISPLAY_HAS_CGAL = _IMP_cnmultifit.IMP_DISPLAY_HAS_CGAL
407 
408 _IMP_cnmultifit.IMP_DISPLAY_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
409 IMP_DISPLAY_HAS_NUMPY = _IMP_cnmultifit.IMP_DISPLAY_HAS_NUMPY
410 
411 _IMP_cnmultifit.IMPDISPLAY_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
412 IMPDISPLAY_SHOW_WARNINGS = _IMP_cnmultifit.IMPDISPLAY_SHOW_WARNINGS
413 import IMP.display
414 
415 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
416 IMP_SCORE_FUNCTOR_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL
417 
418 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
419 IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM
420 
421 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
422 IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS
423 
424 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
425 IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM
426 
427 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_cnmultifit)
428 IMP_SCORE_FUNCTOR_HAS_BOOST_SERIALIZATION = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_SERIALIZATION
429 
430 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
431 IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM
432 
433 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_CGAL_swigconstant(_IMP_cnmultifit)
434 IMP_SCORE_FUNCTOR_HAS_CGAL = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_CGAL
435 
436 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_HDF5_swigconstant(_IMP_cnmultifit)
437 IMP_SCORE_FUNCTOR_HAS_HDF5 = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_HDF5
438 
439 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
440 IMP_SCORE_FUNCTOR_HAS_NUMPY = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_NUMPY
441 
442 _IMP_cnmultifit.IMPSCOREFUNCTOR_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
443 IMPSCOREFUNCTOR_SHOW_WARNINGS = _IMP_cnmultifit.IMPSCOREFUNCTOR_SHOW_WARNINGS
444 import IMP.score_functor
445 
446 _IMP_cnmultifit.IMP_STATISTICS_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
447 IMP_STATISTICS_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_STATISTICS_HAS_IMP_CGAL
448 
449 _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
450 IMP_STATISTICS_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_FILESYSTEM
451 
452 _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
453 IMP_STATISTICS_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_PROGRAMOPTIONS
454 
455 _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
456 IMP_STATISTICS_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_RANDOM
457 
458 _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_cnmultifit)
459 IMP_STATISTICS_HAS_BOOST_SERIALIZATION = _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_SERIALIZATION
460 
461 _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
462 IMP_STATISTICS_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_SYSTEM
463 
464 _IMP_cnmultifit.IMP_STATISTICS_HAS_CGAL_swigconstant(_IMP_cnmultifit)
465 IMP_STATISTICS_HAS_CGAL = _IMP_cnmultifit.IMP_STATISTICS_HAS_CGAL
466 
467 _IMP_cnmultifit.IMP_STATISTICS_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
468 IMP_STATISTICS_HAS_NUMPY = _IMP_cnmultifit.IMP_STATISTICS_HAS_NUMPY
469 
470 _IMP_cnmultifit.IMPSTATISTICS_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
471 IMPSTATISTICS_SHOW_WARNINGS = _IMP_cnmultifit.IMPSTATISTICS_SHOW_WARNINGS
472 import IMP.statistics
473 
474 _IMP_cnmultifit.IMP_CORE_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
475 IMP_CORE_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_CORE_HAS_IMP_CGAL
476 
477 _IMP_cnmultifit.IMP_CORE_HAS_IMP_KERNEL_swigconstant(_IMP_cnmultifit)
478 IMP_CORE_HAS_IMP_KERNEL = _IMP_cnmultifit.IMP_CORE_HAS_IMP_KERNEL
479 
480 _IMP_cnmultifit.IMP_CORE_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
481 IMP_CORE_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_CORE_HAS_BOOST_FILESYSTEM
482 
483 _IMP_cnmultifit.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
484 IMP_CORE_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS
485 
486 _IMP_cnmultifit.IMP_CORE_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
487 IMP_CORE_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_CORE_HAS_BOOST_RANDOM
488 
489 _IMP_cnmultifit.IMP_CORE_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_cnmultifit)
490 IMP_CORE_HAS_BOOST_SERIALIZATION = _IMP_cnmultifit.IMP_CORE_HAS_BOOST_SERIALIZATION
491 
492 _IMP_cnmultifit.IMP_CORE_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
493 IMP_CORE_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_CORE_HAS_BOOST_SYSTEM
494 
495 _IMP_cnmultifit.IMP_CORE_HAS_CGAL_swigconstant(_IMP_cnmultifit)
496 IMP_CORE_HAS_CGAL = _IMP_cnmultifit.IMP_CORE_HAS_CGAL
497 
498 _IMP_cnmultifit.IMP_CORE_HAS_HDF5_swigconstant(_IMP_cnmultifit)
499 IMP_CORE_HAS_HDF5 = _IMP_cnmultifit.IMP_CORE_HAS_HDF5
500 
501 _IMP_cnmultifit.IMP_CORE_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
502 IMP_CORE_HAS_NUMPY = _IMP_cnmultifit.IMP_CORE_HAS_NUMPY
503 
504 _IMP_cnmultifit.IMPCORE_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
505 IMPCORE_SHOW_WARNINGS = _IMP_cnmultifit.IMPCORE_SHOW_WARNINGS
506 import IMP.core
507 
508 _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_ALGEBRA_swigconstant(_IMP_cnmultifit)
509 IMP_CONTAINER_HAS_IMP_ALGEBRA = _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_ALGEBRA
510 
511 _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
512 IMP_CONTAINER_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_CGAL
513 
514 _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_DISPLAY_swigconstant(_IMP_cnmultifit)
515 IMP_CONTAINER_HAS_IMP_DISPLAY = _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_DISPLAY
516 
517 _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_KERNEL_swigconstant(_IMP_cnmultifit)
518 IMP_CONTAINER_HAS_IMP_KERNEL = _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_KERNEL
519 
520 _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
521 IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR
522 
523 _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
524 IMP_CONTAINER_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_FILESYSTEM
525 
526 _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
527 IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS
528 
529 _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
530 IMP_CONTAINER_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_RANDOM
531 
532 _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_cnmultifit)
533 IMP_CONTAINER_HAS_BOOST_SERIALIZATION = _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_SERIALIZATION
534 
535 _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
536 IMP_CONTAINER_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_SYSTEM
537 
538 _IMP_cnmultifit.IMP_CONTAINER_HAS_CGAL_swigconstant(_IMP_cnmultifit)
539 IMP_CONTAINER_HAS_CGAL = _IMP_cnmultifit.IMP_CONTAINER_HAS_CGAL
540 
541 _IMP_cnmultifit.IMP_CONTAINER_HAS_HDF5_swigconstant(_IMP_cnmultifit)
542 IMP_CONTAINER_HAS_HDF5 = _IMP_cnmultifit.IMP_CONTAINER_HAS_HDF5
543 
544 _IMP_cnmultifit.IMP_CONTAINER_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
545 IMP_CONTAINER_HAS_NUMPY = _IMP_cnmultifit.IMP_CONTAINER_HAS_NUMPY
546 
547 _IMP_cnmultifit.IMP_CONTAINER_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
548 IMP_CONTAINER_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_CONTAINER_HAS_PYTHON_IHM
549 
550 _IMP_cnmultifit.IMP_CONTAINER_HAS_GOOGLE_DENSE_HASH_MAP_swigconstant(_IMP_cnmultifit)
551 IMP_CONTAINER_HAS_GOOGLE_DENSE_HASH_MAP = _IMP_cnmultifit.IMP_CONTAINER_HAS_GOOGLE_DENSE_HASH_MAP
552 
553 _IMP_cnmultifit.IMP_CONTAINER_HAS_ROBIN_MAP_swigconstant(_IMP_cnmultifit)
554 IMP_CONTAINER_HAS_ROBIN_MAP = _IMP_cnmultifit.IMP_CONTAINER_HAS_ROBIN_MAP
555 
556 _IMP_cnmultifit.IMPCONTAINER_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
557 IMPCONTAINER_SHOW_WARNINGS = _IMP_cnmultifit.IMPCONTAINER_SHOW_WARNINGS
558 import IMP.container
559 
560 _IMP_cnmultifit.IMP_ATOM_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
561 IMP_ATOM_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_ATOM_HAS_IMP_CGAL
562 
563 _IMP_cnmultifit.IMP_ATOM_HAS_IMP_KERNEL_swigconstant(_IMP_cnmultifit)
564 IMP_ATOM_HAS_IMP_KERNEL = _IMP_cnmultifit.IMP_ATOM_HAS_IMP_KERNEL
565 
566 _IMP_cnmultifit.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
567 IMP_ATOM_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR
568 
569 _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
570 IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS
571 
572 _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
573 IMP_ATOM_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_RANDOM
574 
575 _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
576 IMP_ATOM_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_REGEX
577 
578 _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_cnmultifit)
579 IMP_ATOM_HAS_BOOST_SERIALIZATION = _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_SERIALIZATION
580 
581 _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
582 IMP_ATOM_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_SYSTEM
583 
584 _IMP_cnmultifit.IMP_ATOM_HAS_CGAL_swigconstant(_IMP_cnmultifit)
585 IMP_ATOM_HAS_CGAL = _IMP_cnmultifit.IMP_ATOM_HAS_CGAL
586 
587 _IMP_cnmultifit.IMP_ATOM_HAS_HDF5_swigconstant(_IMP_cnmultifit)
588 IMP_ATOM_HAS_HDF5 = _IMP_cnmultifit.IMP_ATOM_HAS_HDF5
589 
590 _IMP_cnmultifit.IMP_ATOM_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
591 IMP_ATOM_HAS_NUMPY = _IMP_cnmultifit.IMP_ATOM_HAS_NUMPY
592 
593 _IMP_cnmultifit.IMP_ATOM_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
594 IMP_ATOM_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_ATOM_HAS_PYTHON_IHM
595 
596 _IMP_cnmultifit.IMPATOM_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
597 IMPATOM_SHOW_WARNINGS = _IMP_cnmultifit.IMPATOM_SHOW_WARNINGS
598 
599 _IMP_cnmultifit.IMP_ATOM_TYPE_INDEX_swigconstant(_IMP_cnmultifit)
600 IMP_ATOM_TYPE_INDEX = _IMP_cnmultifit.IMP_ATOM_TYPE_INDEX
601 
602 _IMP_cnmultifit.IMP_RESIDUE_TYPE_INDEX_swigconstant(_IMP_cnmultifit)
603 IMP_RESIDUE_TYPE_INDEX = _IMP_cnmultifit.IMP_RESIDUE_TYPE_INDEX
604 
605 _IMP_cnmultifit.IMP_HIERARCHY_TYPE_INDEX_swigconstant(_IMP_cnmultifit)
606 IMP_HIERARCHY_TYPE_INDEX = _IMP_cnmultifit.IMP_HIERARCHY_TYPE_INDEX
607 
608 _IMP_cnmultifit.IMP_CHAIN_TYPE_INDEX_swigconstant(_IMP_cnmultifit)
609 IMP_CHAIN_TYPE_INDEX = _IMP_cnmultifit.IMP_CHAIN_TYPE_INDEX
610 import IMP.atom
611 
612 _IMP_cnmultifit.IMP_EM_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
613 IMP_EM_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_EM_HAS_IMP_CGAL
614 
615 _IMP_cnmultifit.IMP_EM_HAS_IMP_CONTAINER_swigconstant(_IMP_cnmultifit)
616 IMP_EM_HAS_IMP_CONTAINER = _IMP_cnmultifit.IMP_EM_HAS_IMP_CONTAINER
617 
618 _IMP_cnmultifit.IMP_EM_HAS_IMP_DISPLAY_swigconstant(_IMP_cnmultifit)
619 IMP_EM_HAS_IMP_DISPLAY = _IMP_cnmultifit.IMP_EM_HAS_IMP_DISPLAY
620 
621 _IMP_cnmultifit.IMP_EM_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
622 IMP_EM_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_EM_HAS_IMP_SCORE_FUNCTOR
623 
624 _IMP_cnmultifit.IMP_EM_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
625 IMP_EM_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_EM_HAS_BOOST_FILESYSTEM
626 
627 _IMP_cnmultifit.IMP_EM_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
628 IMP_EM_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_EM_HAS_BOOST_PROGRAMOPTIONS
629 
630 _IMP_cnmultifit.IMP_EM_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
631 IMP_EM_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_EM_HAS_BOOST_RANDOM
632 
633 _IMP_cnmultifit.IMP_EM_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
634 IMP_EM_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_EM_HAS_BOOST_REGEX
635 
636 _IMP_cnmultifit.IMP_EM_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_cnmultifit)
637 IMP_EM_HAS_BOOST_SERIALIZATION = _IMP_cnmultifit.IMP_EM_HAS_BOOST_SERIALIZATION
638 
639 _IMP_cnmultifit.IMP_EM_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
640 IMP_EM_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_EM_HAS_BOOST_SYSTEM
641 
642 _IMP_cnmultifit.IMP_EM_HAS_CGAL_swigconstant(_IMP_cnmultifit)
643 IMP_EM_HAS_CGAL = _IMP_cnmultifit.IMP_EM_HAS_CGAL
644 
645 _IMP_cnmultifit.IMP_EM_HAS_HDF5_swigconstant(_IMP_cnmultifit)
646 IMP_EM_HAS_HDF5 = _IMP_cnmultifit.IMP_EM_HAS_HDF5
647 
648 _IMP_cnmultifit.IMP_EM_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
649 IMP_EM_HAS_NUMPY = _IMP_cnmultifit.IMP_EM_HAS_NUMPY
650 
651 _IMP_cnmultifit.IMP_EM_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
652 IMP_EM_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_EM_HAS_PYTHON_IHM
653 
654 _IMP_cnmultifit.IMPEM_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
655 IMPEM_SHOW_WARNINGS = _IMP_cnmultifit.IMPEM_SHOW_WARNINGS
656 import IMP.em
657 
658 _IMP_cnmultifit.IMP_SAXS_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
659 IMP_SAXS_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_SAXS_HAS_IMP_CGAL
660 
661 _IMP_cnmultifit.IMP_SAXS_HAS_IMP_CONTAINER_swigconstant(_IMP_cnmultifit)
662 IMP_SAXS_HAS_IMP_CONTAINER = _IMP_cnmultifit.IMP_SAXS_HAS_IMP_CONTAINER
663 
664 _IMP_cnmultifit.IMP_SAXS_HAS_IMP_DISPLAY_swigconstant(_IMP_cnmultifit)
665 IMP_SAXS_HAS_IMP_DISPLAY = _IMP_cnmultifit.IMP_SAXS_HAS_IMP_DISPLAY
666 
667 _IMP_cnmultifit.IMP_SAXS_HAS_IMP_KERNEL_swigconstant(_IMP_cnmultifit)
668 IMP_SAXS_HAS_IMP_KERNEL = _IMP_cnmultifit.IMP_SAXS_HAS_IMP_KERNEL
669 
670 _IMP_cnmultifit.IMP_SAXS_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
671 IMP_SAXS_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_SAXS_HAS_IMP_SCORE_FUNCTOR
672 
673 _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
674 IMP_SAXS_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_FILESYSTEM
675 
676 _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
677 IMP_SAXS_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_PROGRAMOPTIONS
678 
679 _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
680 IMP_SAXS_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_RANDOM
681 
682 _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
683 IMP_SAXS_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_REGEX
684 
685 _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_cnmultifit)
686 IMP_SAXS_HAS_BOOST_SERIALIZATION = _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_SERIALIZATION
687 
688 _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
689 IMP_SAXS_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_SYSTEM
690 
691 _IMP_cnmultifit.IMP_SAXS_HAS_CGAL_swigconstant(_IMP_cnmultifit)
692 IMP_SAXS_HAS_CGAL = _IMP_cnmultifit.IMP_SAXS_HAS_CGAL
693 
694 _IMP_cnmultifit.IMP_SAXS_HAS_HDF5_swigconstant(_IMP_cnmultifit)
695 IMP_SAXS_HAS_HDF5 = _IMP_cnmultifit.IMP_SAXS_HAS_HDF5
696 
697 _IMP_cnmultifit.IMP_SAXS_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
698 IMP_SAXS_HAS_NUMPY = _IMP_cnmultifit.IMP_SAXS_HAS_NUMPY
699 
700 _IMP_cnmultifit.IMP_SAXS_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
701 IMP_SAXS_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_SAXS_HAS_PYTHON_IHM
702 
703 _IMP_cnmultifit.IMPSAXS_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
704 IMPSAXS_SHOW_WARNINGS = _IMP_cnmultifit.IMPSAXS_SHOW_WARNINGS
705 import IMP.saxs
706 
707 _IMP_cnmultifit.IMP_ISD_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
708 IMP_ISD_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_ISD_HAS_IMP_CGAL
709 
710 _IMP_cnmultifit.IMP_ISD_HAS_IMP_DISPLAY_swigconstant(_IMP_cnmultifit)
711 IMP_ISD_HAS_IMP_DISPLAY = _IMP_cnmultifit.IMP_ISD_HAS_IMP_DISPLAY
712 
713 _IMP_cnmultifit.IMP_ISD_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
714 IMP_ISD_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_ISD_HAS_IMP_SCORE_FUNCTOR
715 
716 _IMP_cnmultifit.IMP_ISD_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
717 IMP_ISD_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_ISD_HAS_BOOST_FILESYSTEM
718 
719 _IMP_cnmultifit.IMP_ISD_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
720 IMP_ISD_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_ISD_HAS_BOOST_PROGRAMOPTIONS
721 
722 _IMP_cnmultifit.IMP_ISD_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
723 IMP_ISD_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_ISD_HAS_BOOST_RANDOM
724 
725 _IMP_cnmultifit.IMP_ISD_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
726 IMP_ISD_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_ISD_HAS_BOOST_REGEX
727 
728 _IMP_cnmultifit.IMP_ISD_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_cnmultifit)
729 IMP_ISD_HAS_BOOST_SERIALIZATION = _IMP_cnmultifit.IMP_ISD_HAS_BOOST_SERIALIZATION
730 
731 _IMP_cnmultifit.IMP_ISD_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
732 IMP_ISD_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_ISD_HAS_BOOST_SYSTEM
733 
734 _IMP_cnmultifit.IMP_ISD_HAS_CGAL_swigconstant(_IMP_cnmultifit)
735 IMP_ISD_HAS_CGAL = _IMP_cnmultifit.IMP_ISD_HAS_CGAL
736 
737 _IMP_cnmultifit.IMP_ISD_HAS_HDF5_swigconstant(_IMP_cnmultifit)
738 IMP_ISD_HAS_HDF5 = _IMP_cnmultifit.IMP_ISD_HAS_HDF5
739 
740 _IMP_cnmultifit.IMP_ISD_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
741 IMP_ISD_HAS_NUMPY = _IMP_cnmultifit.IMP_ISD_HAS_NUMPY
742 
743 _IMP_cnmultifit.IMP_ISD_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
744 IMP_ISD_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_ISD_HAS_PYTHON_IHM
745 
746 _IMP_cnmultifit.IMPISD_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
747 IMPISD_SHOW_WARNINGS = _IMP_cnmultifit.IMPISD_SHOW_WARNINGS
748 import IMP.isd
749 
750 _IMP_cnmultifit.IMP_RMF_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
751 IMP_RMF_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_RMF_HAS_IMP_CGAL
752 
753 _IMP_cnmultifit.IMP_RMF_HAS_IMP_EM_swigconstant(_IMP_cnmultifit)
754 IMP_RMF_HAS_IMP_EM = _IMP_cnmultifit.IMP_RMF_HAS_IMP_EM
755 
756 _IMP_cnmultifit.IMP_RMF_HAS_IMP_SAXS_swigconstant(_IMP_cnmultifit)
757 IMP_RMF_HAS_IMP_SAXS = _IMP_cnmultifit.IMP_RMF_HAS_IMP_SAXS
758 
759 _IMP_cnmultifit.IMP_RMF_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
760 IMP_RMF_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_RMF_HAS_IMP_SCORE_FUNCTOR
761 
762 _IMP_cnmultifit.IMP_RMF_HAS_IMP_STATISTICS_swigconstant(_IMP_cnmultifit)
763 IMP_RMF_HAS_IMP_STATISTICS = _IMP_cnmultifit.IMP_RMF_HAS_IMP_STATISTICS
764 
765 _IMP_cnmultifit.IMP_RMF_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
766 IMP_RMF_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_RMF_HAS_BOOST_FILESYSTEM
767 
768 _IMP_cnmultifit.IMP_RMF_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
769 IMP_RMF_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_RMF_HAS_BOOST_PROGRAMOPTIONS
770 
771 _IMP_cnmultifit.IMP_RMF_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
772 IMP_RMF_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_RMF_HAS_BOOST_RANDOM
773 
774 _IMP_cnmultifit.IMP_RMF_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
775 IMP_RMF_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_RMF_HAS_BOOST_REGEX
776 
777 _IMP_cnmultifit.IMP_RMF_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_cnmultifit)
778 IMP_RMF_HAS_BOOST_SERIALIZATION = _IMP_cnmultifit.IMP_RMF_HAS_BOOST_SERIALIZATION
779 
780 _IMP_cnmultifit.IMP_RMF_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
781 IMP_RMF_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_RMF_HAS_BOOST_SYSTEM
782 
783 _IMP_cnmultifit.IMP_RMF_HAS_CGAL_swigconstant(_IMP_cnmultifit)
784 IMP_RMF_HAS_CGAL = _IMP_cnmultifit.IMP_RMF_HAS_CGAL
785 
786 _IMP_cnmultifit.IMP_RMF_HAS_HDF5_swigconstant(_IMP_cnmultifit)
787 IMP_RMF_HAS_HDF5 = _IMP_cnmultifit.IMP_RMF_HAS_HDF5
788 
789 _IMP_cnmultifit.IMP_RMF_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
790 IMP_RMF_HAS_NUMPY = _IMP_cnmultifit.IMP_RMF_HAS_NUMPY
791 
792 _IMP_cnmultifit.IMP_RMF_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
793 IMP_RMF_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_RMF_HAS_PYTHON_IHM
794 
795 _IMP_cnmultifit.IMPRMF_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
796 IMPRMF_SHOW_WARNINGS = _IMP_cnmultifit.IMPRMF_SHOW_WARNINGS
797 import IMP.rmf
798 import RMF
799 
800 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_ATOM_swigconstant(_IMP_cnmultifit)
801 IMP_DOMINO_HAS_IMP_ATOM = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_ATOM
802 
803 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
804 IMP_DOMINO_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_CGAL
805 
806 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_EM_swigconstant(_IMP_cnmultifit)
807 IMP_DOMINO_HAS_IMP_EM = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_EM
808 
809 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_ISD_swigconstant(_IMP_cnmultifit)
810 IMP_DOMINO_HAS_IMP_ISD = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_ISD
811 
812 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_KERNEL_swigconstant(_IMP_cnmultifit)
813 IMP_DOMINO_HAS_IMP_KERNEL = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_KERNEL
814 
815 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_RMF_swigconstant(_IMP_cnmultifit)
816 IMP_DOMINO_HAS_IMP_RMF = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_RMF
817 
818 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_SAXS_swigconstant(_IMP_cnmultifit)
819 IMP_DOMINO_HAS_IMP_SAXS = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_SAXS
820 
821 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
822 IMP_DOMINO_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_SCORE_FUNCTOR
823 
824 _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
825 IMP_DOMINO_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_FILESYSTEM
826 
827 _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
828 IMP_DOMINO_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_PROGRAMOPTIONS
829 
830 _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
831 IMP_DOMINO_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_RANDOM
832 
833 _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
834 IMP_DOMINO_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_REGEX
835 
836 _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_cnmultifit)
837 IMP_DOMINO_HAS_BOOST_SERIALIZATION = _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_SERIALIZATION
838 
839 _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
840 IMP_DOMINO_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_SYSTEM
841 
842 _IMP_cnmultifit.IMP_DOMINO_HAS_CGAL_swigconstant(_IMP_cnmultifit)
843 IMP_DOMINO_HAS_CGAL = _IMP_cnmultifit.IMP_DOMINO_HAS_CGAL
844 
845 _IMP_cnmultifit.IMP_DOMINO_HAS_HDF5_swigconstant(_IMP_cnmultifit)
846 IMP_DOMINO_HAS_HDF5 = _IMP_cnmultifit.IMP_DOMINO_HAS_HDF5
847 
848 _IMP_cnmultifit.IMP_DOMINO_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
849 IMP_DOMINO_HAS_NUMPY = _IMP_cnmultifit.IMP_DOMINO_HAS_NUMPY
850 
851 _IMP_cnmultifit.IMP_DOMINO_HAS_RMF_swigconstant(_IMP_cnmultifit)
852 IMP_DOMINO_HAS_RMF = _IMP_cnmultifit.IMP_DOMINO_HAS_RMF
853 
854 _IMP_cnmultifit.IMP_DOMINO_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
855 IMP_DOMINO_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_DOMINO_HAS_PYTHON_IHM
856 
857 _IMP_cnmultifit.IMPDOMINO_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
858 IMPDOMINO_SHOW_WARNINGS = _IMP_cnmultifit.IMPDOMINO_SHOW_WARNINGS
859 import RMF_HDF5
860 import IMP.domino
861 
862 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
863 IMP_MULTIFIT_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_CGAL
864 
865 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_CONTAINER_swigconstant(_IMP_cnmultifit)
866 IMP_MULTIFIT_HAS_IMP_CONTAINER = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_CONTAINER
867 
868 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_DISPLAY_swigconstant(_IMP_cnmultifit)
869 IMP_MULTIFIT_HAS_IMP_DISPLAY = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_DISPLAY
870 
871 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_ISD_swigconstant(_IMP_cnmultifit)
872 IMP_MULTIFIT_HAS_IMP_ISD = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_ISD
873 
874 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_KERNEL_swigconstant(_IMP_cnmultifit)
875 IMP_MULTIFIT_HAS_IMP_KERNEL = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_KERNEL
876 
877 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_RMF_swigconstant(_IMP_cnmultifit)
878 IMP_MULTIFIT_HAS_IMP_RMF = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_RMF
879 
880 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_SAXS_swigconstant(_IMP_cnmultifit)
881 IMP_MULTIFIT_HAS_IMP_SAXS = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_SAXS
882 
883 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
884 IMP_MULTIFIT_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_SCORE_FUNCTOR
885 
886 _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_GRAPH_swigconstant(_IMP_cnmultifit)
887 IMP_MULTIFIT_HAS_BOOST_GRAPH = _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_GRAPH
888 
889 _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
890 IMP_MULTIFIT_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_RANDOM
891 
892 _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
893 IMP_MULTIFIT_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_REGEX
894 
895 _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_cnmultifit)
896 IMP_MULTIFIT_HAS_BOOST_SERIALIZATION = _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_SERIALIZATION
897 
898 _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
899 IMP_MULTIFIT_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_SYSTEM
900 
901 _IMP_cnmultifit.IMP_MULTIFIT_HAS_CGAL_swigconstant(_IMP_cnmultifit)
902 IMP_MULTIFIT_HAS_CGAL = _IMP_cnmultifit.IMP_MULTIFIT_HAS_CGAL
903 
904 _IMP_cnmultifit.IMP_MULTIFIT_HAS_HDF5_swigconstant(_IMP_cnmultifit)
905 IMP_MULTIFIT_HAS_HDF5 = _IMP_cnmultifit.IMP_MULTIFIT_HAS_HDF5
906 
907 _IMP_cnmultifit.IMP_MULTIFIT_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
908 IMP_MULTIFIT_HAS_NUMPY = _IMP_cnmultifit.IMP_MULTIFIT_HAS_NUMPY
909 
910 _IMP_cnmultifit.IMP_MULTIFIT_HAS_RMF_swigconstant(_IMP_cnmultifit)
911 IMP_MULTIFIT_HAS_RMF = _IMP_cnmultifit.IMP_MULTIFIT_HAS_RMF
912 
913 _IMP_cnmultifit.IMP_MULTIFIT_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
914 IMP_MULTIFIT_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_MULTIFIT_HAS_PYTHON_IHM
915 
916 _IMP_cnmultifit.IMPMULTIFIT_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
917 IMPMULTIFIT_SHOW_WARNINGS = _IMP_cnmultifit.IMPMULTIFIT_SHOW_WARNINGS
918 import IMP.multifit
919 
920 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
921 IMP_CNMULTIFIT_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_CGAL
922 
923 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_CONTAINER_swigconstant(_IMP_cnmultifit)
924 IMP_CNMULTIFIT_HAS_IMP_CONTAINER = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_CONTAINER
925 
926 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_DISPLAY_swigconstant(_IMP_cnmultifit)
927 IMP_CNMULTIFIT_HAS_IMP_DISPLAY = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_DISPLAY
928 
929 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_DOMINO_swigconstant(_IMP_cnmultifit)
930 IMP_CNMULTIFIT_HAS_IMP_DOMINO = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_DOMINO
931 
932 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_ISD_swigconstant(_IMP_cnmultifit)
933 IMP_CNMULTIFIT_HAS_IMP_ISD = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_ISD
934 
935 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_KERNEL_swigconstant(_IMP_cnmultifit)
936 IMP_CNMULTIFIT_HAS_IMP_KERNEL = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_KERNEL
937 
938 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_RMF_swigconstant(_IMP_cnmultifit)
939 IMP_CNMULTIFIT_HAS_IMP_RMF = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_RMF
940 
941 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_SAXS_swigconstant(_IMP_cnmultifit)
942 IMP_CNMULTIFIT_HAS_IMP_SAXS = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_SAXS
943 
944 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
945 IMP_CNMULTIFIT_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_SCORE_FUNCTOR
946 
947 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_GRAPH_swigconstant(_IMP_cnmultifit)
948 IMP_CNMULTIFIT_HAS_BOOST_GRAPH = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_GRAPH
949 
950 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
951 IMP_CNMULTIFIT_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_RANDOM
952 
953 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
954 IMP_CNMULTIFIT_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_REGEX
955 
956 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_SERIALIZATION_swigconstant(_IMP_cnmultifit)
957 IMP_CNMULTIFIT_HAS_BOOST_SERIALIZATION = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_SERIALIZATION
958 
959 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
960 IMP_CNMULTIFIT_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_SYSTEM
961 
962 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_CGAL_swigconstant(_IMP_cnmultifit)
963 IMP_CNMULTIFIT_HAS_CGAL = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_CGAL
964 
965 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_FFTW3_swigconstant(_IMP_cnmultifit)
966 IMP_CNMULTIFIT_HAS_FFTW3 = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_FFTW3
967 
968 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_HDF5_swigconstant(_IMP_cnmultifit)
969 IMP_CNMULTIFIT_HAS_HDF5 = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_HDF5
970 
971 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
972 IMP_CNMULTIFIT_HAS_NUMPY = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_NUMPY
973 
974 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_RMF_swigconstant(_IMP_cnmultifit)
975 IMP_CNMULTIFIT_HAS_RMF = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_RMF
976 
977 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
978 IMP_CNMULTIFIT_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_PYTHON_IHM
979 
980 _IMP_cnmultifit.IMPCNMULTIFIT_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
981 IMPCNMULTIFIT_SHOW_WARNINGS = _IMP_cnmultifit.IMPCNMULTIFIT_SHOW_WARNINGS
982 
983 AlignSymmetrics=list
984 _plural_types.append("AlignSymmetrics")
985 _value_types.append("AlignSymmetric")
986 
987 
988 CnSymmAxisDetectors=list
989 _plural_types.append("CnSymmAxisDetectors")
990 _value_types.append("CnSymmAxisDetector")
991 
992 
993 MolCnSymmAxisDetectors=list
994 _plural_types.append("MolCnSymmAxisDetectors")
995 _value_types.append("MolCnSymmAxisDetector")
996 
997 class CnSymmAxisDetector(object):
998  """Proxy of C++ IMP::cnmultifit::CnSymmAxisDetector class"""
999  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
1000 
1001  def __init__(self, *args):
1002  """
1003  __init__(IMP::cnmultifit::CnSymmAxisDetector self, int symm_deg, DensityMap dmap, float density_threshold, float top_p=0.8) -> CnSymmAxisDetector
1004  __init__(IMP::cnmultifit::CnSymmAxisDetector self, int symm_deg, DensityMap dmap, float density_threshold) -> CnSymmAxisDetector
1005  __init__(IMP::cnmultifit::CnSymmAxisDetector self, int symm_deg, IMP::atom::Hierarchies const & mhs) -> CnSymmAxisDetector
1006  """
1007  this = _IMP_cnmultifit.new_CnSymmAxisDetector(*args)
1008  try:
1009  self.this.append(this)
1010  except:
1011  self.this = this
1012 
1013  def get_pca(self):
1014  """get_pca(CnSymmAxisDetector self) -> PrincipalComponentAnalysis3D"""
1015  return _IMP_cnmultifit.CnSymmAxisDetector_get_pca(self)
1016 
1017 
1018  def calc_symm_score(self, symm_axis_ind):
1019  """calc_symm_score(CnSymmAxisDetector self, int symm_axis_ind) -> float"""
1020  return _IMP_cnmultifit.CnSymmAxisDetector_calc_symm_score(self, symm_axis_ind)
1021 
1022 
1023  def get_symmetry_axis(self):
1024  """get_symmetry_axis(CnSymmAxisDetector self) -> Vector3D"""
1025  return _IMP_cnmultifit.CnSymmAxisDetector_get_symmetry_axis(self)
1026 
1027 
1028  def get_symmetry_axis_index(self):
1029  """get_symmetry_axis_index(CnSymmAxisDetector self) -> int"""
1030  return _IMP_cnmultifit.CnSymmAxisDetector_get_symmetry_axis_index(self)
1031 
1032 
1033  def get_non_symmetry_axis_length(self):
1034  """get_non_symmetry_axis_length(CnSymmAxisDetector self) -> int"""
1035  return _IMP_cnmultifit.CnSymmAxisDetector_get_non_symmetry_axis_length(self)
1036 
1037 
1038  def show(self, *args):
1039  """
1040  show(CnSymmAxisDetector self, _ostream out)
1041  show(CnSymmAxisDetector self)
1042  """
1043  return _IMP_cnmultifit.CnSymmAxisDetector_show(self, *args)
1044 
1045 
1046  def __str__(self):
1047  """__str__(CnSymmAxisDetector self) -> std::string"""
1048  return _IMP_cnmultifit.CnSymmAxisDetector___str__(self)
1049 
1050 
1051  def __repr__(self):
1052  """__repr__(CnSymmAxisDetector self) -> std::string"""
1053  return _IMP_cnmultifit.CnSymmAxisDetector___repr__(self)
1054 
1055  __swig_destroy__ = _IMP_cnmultifit.delete_CnSymmAxisDetector
1056  __del__ = lambda self: None
1057 CnSymmAxisDetector_swigregister = _IMP_cnmultifit.CnSymmAxisDetector_swigregister
1058 CnSymmAxisDetector_swigregister(CnSymmAxisDetector)
1059 
1060 class MolCnSymmAxisDetector(object):
1061  """Proxy of C++ IMP::cnmultifit::MolCnSymmAxisDetector class"""
1062  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
1063 
1064  def __init__(self, symm_deg, mhs):
1065  """__init__(IMP::cnmultifit::MolCnSymmAxisDetector self, int symm_deg, IMP::atom::Hierarchies const & mhs) -> MolCnSymmAxisDetector"""
1066  this = _IMP_cnmultifit.new_MolCnSymmAxisDetector(symm_deg, mhs)
1067  try:
1068  self.this.append(this)
1069  except:
1070  self.this = this
1071 
1072  def get_pca(self):
1073  """get_pca(MolCnSymmAxisDetector self) -> PrincipalComponentAnalysis3D"""
1074  return _IMP_cnmultifit.MolCnSymmAxisDetector_get_pca(self)
1075 
1076 
1077  def get_symmetry_axis(self):
1078  """get_symmetry_axis(MolCnSymmAxisDetector self) -> Vector3D"""
1079  return _IMP_cnmultifit.MolCnSymmAxisDetector_get_symmetry_axis(self)
1080 
1081 
1082  def get_symmetry_axis_index(self):
1083  """get_symmetry_axis_index(MolCnSymmAxisDetector self) -> int"""
1084  return _IMP_cnmultifit.MolCnSymmAxisDetector_get_symmetry_axis_index(self)
1085 
1086 
1087  def show(self, *args):
1088  """
1089  show(MolCnSymmAxisDetector self, _ostream out)
1090  show(MolCnSymmAxisDetector self)
1091  """
1092  return _IMP_cnmultifit.MolCnSymmAxisDetector_show(self, *args)
1093 
1094 
1095  def calc_symm_score(self, symm_axis_ind):
1096  """calc_symm_score(MolCnSymmAxisDetector self, int symm_axis_ind) -> float"""
1097  return _IMP_cnmultifit.MolCnSymmAxisDetector_calc_symm_score(self, symm_axis_ind)
1098 
1099 
1100  def __str__(self):
1101  """__str__(MolCnSymmAxisDetector self) -> std::string"""
1102  return _IMP_cnmultifit.MolCnSymmAxisDetector___str__(self)
1103 
1104 
1105  def __repr__(self):
1106  """__repr__(MolCnSymmAxisDetector self) -> std::string"""
1107  return _IMP_cnmultifit.MolCnSymmAxisDetector___repr__(self)
1108 
1109  __swig_destroy__ = _IMP_cnmultifit.delete_MolCnSymmAxisDetector
1110  __del__ = lambda self: None
1111 MolCnSymmAxisDetector_swigregister = _IMP_cnmultifit.MolCnSymmAxisDetector_swigregister
1112 MolCnSymmAxisDetector_swigregister(MolCnSymmAxisDetector)
1113 
1114 class AlignSymmetric(object):
1115  """Proxy of C++ IMP::cnmultifit::AlignSymmetric class"""
1116  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
1117 
1118  def __init__(self, dmap, threshold, cn_symm_deg):
1119  """__init__(IMP::cnmultifit::AlignSymmetric self, DensityMap dmap, float threshold, int cn_symm_deg) -> AlignSymmetric"""
1120  this = _IMP_cnmultifit.new_AlignSymmetric(dmap, threshold, cn_symm_deg)
1121  try:
1122  self.this.append(this)
1123  except:
1124  self.this = this
1125 
1126  def get_sorted_principal_values(self):
1127  """get_sorted_principal_values(AlignSymmetric self) -> IMP::Floats"""
1128  return _IMP_cnmultifit.AlignSymmetric_get_sorted_principal_values(self)
1129 
1130 
1131  def score_alignment(self, mhs, max_allowed_diff):
1132  """score_alignment(AlignSymmetric self, IMP::atom::Hierarchies mhs, float max_allowed_diff) -> int"""
1133  return _IMP_cnmultifit.AlignSymmetric_score_alignment(self, mhs, max_allowed_diff)
1134 
1135 
1136  def get_symm_axis_alignments_from_model_to_density(self, mhs, sample_translation, fine_rotation_sampling=True):
1137  """
1138  get_symm_axis_alignments_from_model_to_density(AlignSymmetric self, IMP::atom::Hierarchies mhs, bool sample_translation, bool fine_rotation_sampling=True) -> IMP::algebra::Transformation3Ds
1139  get_symm_axis_alignments_from_model_to_density(AlignSymmetric self, IMP::atom::Hierarchies mhs, bool sample_translation) -> IMP::algebra::Transformation3Ds
1140  """
1141  return _IMP_cnmultifit.AlignSymmetric_get_symm_axis_alignments_from_model_to_density(self, mhs, sample_translation, fine_rotation_sampling)
1142 
1143 
1144  def show(self, *args):
1145  """
1146  show(AlignSymmetric self, _ostream out)
1147  show(AlignSymmetric self)
1148  """
1149  return _IMP_cnmultifit.AlignSymmetric_show(self, *args)
1150 
1151 
1152  def __str__(self):
1153  """__str__(AlignSymmetric self) -> std::string"""
1154  return _IMP_cnmultifit.AlignSymmetric___str__(self)
1155 
1156 
1157  def __repr__(self):
1158  """__repr__(AlignSymmetric self) -> std::string"""
1159  return _IMP_cnmultifit.AlignSymmetric___repr__(self)
1160 
1161  __swig_destroy__ = _IMP_cnmultifit.delete_AlignSymmetric
1162  __del__ = lambda self: None
1163 AlignSymmetric_swigregister = _IMP_cnmultifit.AlignSymmetric_swigregister
1164 AlignSymmetric_swigregister(AlignSymmetric)
1165 
1166 
1167 def generate_cn_transformations(mhs, symm_deg):
1168  """generate_cn_transformations(IMP::atom::Hierarchies mhs, int symm_deg) -> IMP::algebra::Transformation3Ds"""
1169  return _IMP_cnmultifit.generate_cn_transformations(mhs, symm_deg)
1170 
1171 def generate_translations_along_symm_axis(mhs, symm_deg):
1172  """generate_translations_along_symm_axis(IMP::atom::Hierarchies mhs, int symm_deg) -> IMP::algebra::Transformation3Ds"""
1173  return _IMP_cnmultifit.generate_translations_along_symm_axis(mhs, symm_deg)
1174 
1175 def symmetry_local_fitting(mhs, cn_symm_deg, dn_symm_deg, dmap, num_of_trans_to_consider):
1176  """symmetry_local_fitting(IMP::atom::Hierarchies mhs, int cn_symm_deg, int dn_symm_deg, DensityMap dmap, int num_of_trans_to_consider) -> FittingSolutions"""
1177  return _IMP_cnmultifit.symmetry_local_fitting(mhs, cn_symm_deg, dn_symm_deg, dmap, num_of_trans_to_consider)
1178 
1179 def build_cn_dens_assembly(subunit_dens, asmb_dens_header, monomer_t, symm_deg):
1180  """build_cn_dens_assembly(DensityMap subunit_dens, DensityHeader asmb_dens_header, Transformation3D monomer_t, int symm_deg) -> DensityMap"""
1181  return _IMP_cnmultifit.build_cn_dens_assembly(subunit_dens, asmb_dens_header, monomer_t, symm_deg)
1182 
1183 def transform_cn_assembly(mhs, monomer_t):
1184  """transform_cn_assembly(IMP::atom::Hierarchies mhs, Transformation3D monomer_t)"""
1185  return _IMP_cnmultifit.transform_cn_assembly(mhs, monomer_t)
1186 
1187 def fit_cn_assembly(*args):
1188  """
1189  fit_cn_assembly(IMP::atom::Hierarchies mhs, int dn_symm_deg, DensityMap dmap, float threshold, AlignSymmetric aligner, bool sample_translation=False, bool fine_rotational_sampling=True) -> FittingSolutions
1190  fit_cn_assembly(IMP::atom::Hierarchies mhs, int dn_symm_deg, DensityMap dmap, float threshold, AlignSymmetric aligner, bool sample_translation=False) -> FittingSolutions
1191  fit_cn_assembly(IMP::atom::Hierarchies mhs, int dn_symm_deg, DensityMap dmap, float threshold, AlignSymmetric aligner) -> FittingSolutions
1192  fit_cn_assembly(DensityMap asmb_map, MolCnSymmAxisDetector symm_mol, DensityMap dmap, CnSymmAxisDetector symm_map, int symm_deg, float threshold) -> FittingSolutions
1193  """
1194  return _IMP_cnmultifit.fit_cn_assembly(*args)
1195 
1196 def pca_matching(pca1, pca2, resolution):
1197  """pca_matching(PrincipalComponentAnalysis3D pca1, PrincipalComponentAnalysis3D pca2, float resolution) -> bool"""
1198  return _IMP_cnmultifit.pca_matching(pca1, pca2, resolution)
1199 
1200 def cn_symm_score(mhs, center, direction, symm_deg):
1201  """cn_symm_score(IMP::atom::Hierarchies mhs, Vector3D center, Vector3D direction, int symm_deg) -> float"""
1202  return _IMP_cnmultifit.cn_symm_score(mhs, center, direction, symm_deg)
1203 
1204 def prune_by_pca(param_fn, sols, dn=1):
1205  """
1206  prune_by_pca(std::string const & param_fn, IMP::multifit::FittingSolutionRecords const & sols, int dn=1) -> IMP::multifit::FittingSolutionRecords
1207  prune_by_pca(std::string const & param_fn, IMP::multifit::FittingSolutionRecords const & sols) -> IMP::multifit::FittingSolutionRecords
1208  """
1209  return _IMP_cnmultifit.prune_by_pca(param_fn, sols, dn)
1210 
1211 def calc_transformation_around_axis(a, b, angle_rad):
1212  """calc_transformation_around_axis(Vector3D a, Vector3D b, float angle_rad) -> Transformation3D"""
1213  return _IMP_cnmultifit.calc_transformation_around_axis(a, b, angle_rad)
1214 
1215 def get_cn_rmsd(mh1, mh2):
1216  """get_cn_rmsd(IMP::atom::Hierarchies mh1, IMP::atom::Hierarchies mh2) -> float"""
1217  return _IMP_cnmultifit.get_cn_rmsd(mh1, mh2)
1218 
1219 def do_all_fitting(*args):
1220  """
1221  do_all_fitting(std::string const param_filename, std::string const chimera_filename)
1222  do_all_fitting(std::string const param_filename)
1223  """
1224  return _IMP_cnmultifit.do_all_fitting(*args)
1225 
1226 def get_rmsd_for_models(param_filename, trans_filename, ref_filename, start_model=0, end_model=-1):
1227  """
1228  get_rmsd_for_models(std::string const param_filename, std::string const trans_filename, std::string const ref_filename, int start_model=0, int end_model=-1) -> IMP::Floats
1229  get_rmsd_for_models(std::string const param_filename, std::string const trans_filename, std::string const ref_filename, int start_model=0) -> IMP::Floats
1230  get_rmsd_for_models(std::string const param_filename, std::string const trans_filename, std::string const ref_filename) -> IMP::Floats
1231  """
1232  return _IMP_cnmultifit.get_rmsd_for_models(param_filename, trans_filename, ref_filename, start_model, end_model)
1233 
1234 _all_commands = ["build", "rmsd", "surface",
1235  "param", "chimera_models"]
1236 
1237 
1238 def get_module_version():
1239  """get_module_version() -> std::string const"""
1240  return _IMP_cnmultifit.get_module_version()
1241 
1242 def get_example_path(fname):
1243  """get_example_path(std::string fname) -> std::string"""
1244  return _IMP_cnmultifit.get_example_path(fname)
1245 
1246 def get_data_path(fname):
1247  """get_data_path(std::string fname) -> std::string"""
1248  return _IMP_cnmultifit.get_data_path(fname)
1249 
1250 from . import _version_check
1251 _version_check.check_version(get_module_version())
1252 __version__ = get_module_version()
1253 
1254 
1255 
IMP::container
Various classes to hold sets of particles.
IMP::cnmultifit::do_all_fitting
void do_all_fitting(const std::string param_filename, const std::string chimera_filename="")
High level interface to build cyclic symmetric complexes.
IMP::cgal
Make CGAL functionality available to IMP.
IMP::get_data_path
std::string get_data_path(std::string file_name)
Return the full path to one of this module's data files.
IMP::score_functor
Composable functors to implement scores via compile-time composition.
IMP::statistics
Code to compute statistical measures.
IMP::cnmultifit::cn_symm_score
float cn_symm_score(atom::Hierarchies mhs, const algebra::Vector3D &center, const algebra::Vector3D &direction, int symm_deg)
scores an input vector as a symmetry axis
IMP::multifit
Fitting atomic structures into a cryo-electron microscopy density map.
IMP::em
Basic utilities for handling cryo-electron microscopy 3D density maps.
IMP::cnmultifit::get_cn_rmsd
float get_cn_rmsd(atom::Hierarchies mh1, atom::Hierarchies mh2)
Find correspondence between the two rings and calculate rmsd.
IMP::core::show
std::ostream & show(Hierarchy h, std::ostream &out=std::cout)
Print the hierarchy using a given decorator to display each node.
Definition: core/Hierarchy.h:411
IMP::core
Basic functionality that is expected to be used by a wide variety of IMP users.
IMP::algebra
General purpose algebraic and geometric methods that are expected to be used by a wide variety of IMP...
IMP::get_example_path
std::string get_example_path(std::string file_name)
Return the full path to one of this module's example files.
IMP::cnmultifit::fit_cn_assembly
em::FittingSolutions fit_cn_assembly(atom::Hierarchies mhs, int dn_symm_deg, em::DensityMap *dmap, float threshold, const AlignSymmetric &aligner, bool sample_translation=false, bool fine_rotational_sampling=true)
Fit a symmetric model to its density.
IMP::display
Output IMP model data in various file formats.
IMP::atom
Functionality for loading, creating, manipulating and scoring atomic structures.
IMP::rmf
Support for the RMF file format for storing hierarchical molecular data and markup.
IMP::domino
Divide-and-conquer inferential optimization in discrete space.
IMP::saxs
Support for small angle X-ray scattering (SAXS) data.
IMP::get_module_version
std::string get_module_version()
Return the version of this module, as a string.
Definition: EMageFit/__init__.py:5
IMP::isd
Inferential scoring building on methods developed as part of the Inferential Structure Determination ...