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IMP Reference Guide  2.16.0
The Integrative Modeling Platform
version 2.16.0
foxs/__init__.py
1 # This file was automatically generated by SWIG (http://www.swig.org).
2 # Version 3.0.7
3 #
4 # Do not make changes to this file unless you know what you are doing--modify
5 # the SWIG interface file instead.
6 
7 # This wrapper is part of IMP,
8 # Copyright 2007-2021 IMP Inventors. All rights reserved.
9 
10 from __future__ import print_function, division, absolute_import
11 
12 
13 
14 
15 from sys import version_info
16 if version_info >= (2, 6, 0):
17  def swig_import_helper():
18  from os.path import dirname
19  import imp
20  fp = None
21  try:
22  fp, pathname, description = imp.find_module('_IMP_foxs', [dirname(__file__)])
23  except ImportError:
24  import _IMP_foxs
25  return _IMP_foxs
26  if fp is not None:
27  try:
28  _mod = imp.load_module('_IMP_foxs', fp, pathname, description)
29  finally:
30  fp.close()
31  return _mod
32  _IMP_foxs = swig_import_helper()
33  del swig_import_helper
34 else:
35  import _IMP_foxs
36 del version_info
37 try:
38  _swig_property = property
39 except NameError:
40  pass # Python < 2.2 doesn't have 'property'.
41 
42 
43 def _swig_setattr_nondynamic(self, class_type, name, value, static=1):
44  if (name == "thisown"):
45  return self.this.own(value)
46  if (name == "this"):
47  if type(value).__name__ == 'SwigPyObject':
48  self.__dict__[name] = value
49  return
50  method = class_type.__swig_setmethods__.get(name, None)
51  if method:
52  return method(self, value)
53  if (not static):
54  object.__setattr__(self, name, value)
55  else:
56  raise AttributeError("You cannot add attributes to %s" % self)
57 
58 
59 def _swig_setattr(self, class_type, name, value):
60  return _swig_setattr_nondynamic(self, class_type, name, value, 0)
61 
62 
63 def _swig_getattr_nondynamic(self, class_type, name, static=1):
64  if (name == "thisown"):
65  return self.this.own()
66  method = class_type.__swig_getmethods__.get(name, None)
67  if method:
68  return method(self)
69  if (not static):
70  return object.__getattr__(self, name)
71  else:
72  raise AttributeError(name)
73 
74 def _swig_getattr(self, class_type, name):
75  return _swig_getattr_nondynamic(self, class_type, name, 0)
76 
77 
78 def _swig_repr(self):
79  try:
80  strthis = "proxy of " + self.this.__repr__()
81  except:
82  strthis = ""
83  return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
84 
85 try:
86  _object = object
87  _newclass = 1
88 except AttributeError:
89  class _object:
90  pass
91  _newclass = 0
92 
93 
94 
95 def _swig_setattr_nondynamic_method(set):
96  def set_attr(self, name, value):
97  if (name == "thisown"):
98  return self.this.own(value)
99  if hasattr(self, name) or (name == "this"):
100  set(self, name, value)
101  else:
102  raise AttributeError("You cannot add attributes to %s" % self)
103  return set_attr
104 
105 
106 try:
107  import weakref
108  weakref_proxy = weakref.proxy
109 except:
110  weakref_proxy = lambda x: x
111 
112 
113 class IMP_FOXS_SwigPyIterator(object):
114  """Proxy of C++ swig::IMP_FOXS_SwigPyIterator class"""
115  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
116 
117  def __init__(self, *args, **kwargs):
118  raise AttributeError("No constructor defined - class is abstract")
119  __repr__ = _swig_repr
120  __swig_destroy__ = _IMP_foxs.delete_IMP_FOXS_SwigPyIterator
121  __del__ = lambda self: None
122 
123  def value(self):
124  """value(IMP_FOXS_SwigPyIterator self) -> PyObject *"""
125  return _IMP_foxs.IMP_FOXS_SwigPyIterator_value(self)
126 
127 
128  def incr(self, n=1):
129  """
130  incr(IMP_FOXS_SwigPyIterator self, size_t n=1) -> IMP_FOXS_SwigPyIterator
131  incr(IMP_FOXS_SwigPyIterator self) -> IMP_FOXS_SwigPyIterator
132  """
133  return _IMP_foxs.IMP_FOXS_SwigPyIterator_incr(self, n)
134 
135 
136  def decr(self, n=1):
137  """
138  decr(IMP_FOXS_SwigPyIterator self, size_t n=1) -> IMP_FOXS_SwigPyIterator
139  decr(IMP_FOXS_SwigPyIterator self) -> IMP_FOXS_SwigPyIterator
140  """
141  return _IMP_foxs.IMP_FOXS_SwigPyIterator_decr(self, n)
142 
143 
144  def distance(self, x):
145  """distance(IMP_FOXS_SwigPyIterator self, IMP_FOXS_SwigPyIterator x) -> ptrdiff_t"""
146  return _IMP_foxs.IMP_FOXS_SwigPyIterator_distance(self, x)
147 
148 
149  def equal(self, x):
150  """equal(IMP_FOXS_SwigPyIterator self, IMP_FOXS_SwigPyIterator x) -> bool"""
151  return _IMP_foxs.IMP_FOXS_SwigPyIterator_equal(self, x)
152 
153 
154  def copy(self):
155  """copy(IMP_FOXS_SwigPyIterator self) -> IMP_FOXS_SwigPyIterator"""
156  return _IMP_foxs.IMP_FOXS_SwigPyIterator_copy(self)
157 
158 
159  def next(self):
160  """next(IMP_FOXS_SwigPyIterator self) -> PyObject *"""
161  return _IMP_foxs.IMP_FOXS_SwigPyIterator_next(self)
162 
163 
164  def __next__(self):
165  """__next__(IMP_FOXS_SwigPyIterator self) -> PyObject *"""
166  return _IMP_foxs.IMP_FOXS_SwigPyIterator___next__(self)
167 
168 
169  def previous(self):
170  """previous(IMP_FOXS_SwigPyIterator self) -> PyObject *"""
171  return _IMP_foxs.IMP_FOXS_SwigPyIterator_previous(self)
172 
173 
174  def advance(self, n):
175  """advance(IMP_FOXS_SwigPyIterator self, ptrdiff_t n) -> IMP_FOXS_SwigPyIterator"""
176  return _IMP_foxs.IMP_FOXS_SwigPyIterator_advance(self, n)
177 
178 
179  def __eq__(self, x):
180  """__eq__(IMP_FOXS_SwigPyIterator self, IMP_FOXS_SwigPyIterator x) -> bool"""
181  return _IMP_foxs.IMP_FOXS_SwigPyIterator___eq__(self, x)
182 
183 
184  def __ne__(self, x):
185  """__ne__(IMP_FOXS_SwigPyIterator self, IMP_FOXS_SwigPyIterator x) -> bool"""
186  return _IMP_foxs.IMP_FOXS_SwigPyIterator___ne__(self, x)
187 
188 
189  def __iadd__(self, n):
190  """__iadd__(IMP_FOXS_SwigPyIterator self, ptrdiff_t n) -> IMP_FOXS_SwigPyIterator"""
191  return _IMP_foxs.IMP_FOXS_SwigPyIterator___iadd__(self, n)
192 
193 
194  def __isub__(self, n):
195  """__isub__(IMP_FOXS_SwigPyIterator self, ptrdiff_t n) -> IMP_FOXS_SwigPyIterator"""
196  return _IMP_foxs.IMP_FOXS_SwigPyIterator___isub__(self, n)
197 
198 
199  def __add__(self, n):
200  """__add__(IMP_FOXS_SwigPyIterator self, ptrdiff_t n) -> IMP_FOXS_SwigPyIterator"""
201  return _IMP_foxs.IMP_FOXS_SwigPyIterator___add__(self, n)
202 
203 
204  def __sub__(self, *args):
205  """
206  __sub__(IMP_FOXS_SwigPyIterator self, ptrdiff_t n) -> IMP_FOXS_SwigPyIterator
207  __sub__(IMP_FOXS_SwigPyIterator self, IMP_FOXS_SwigPyIterator x) -> ptrdiff_t
208  """
209  return _IMP_foxs.IMP_FOXS_SwigPyIterator___sub__(self, *args)
210 
211  def __iter__(self):
212  return self
213 IMP_FOXS_SwigPyIterator_swigregister = _IMP_foxs.IMP_FOXS_SwigPyIterator_swigregister
214 IMP_FOXS_SwigPyIterator_swigregister(IMP_FOXS_SwigPyIterator)
215 
216 
217 _value_types=[]
218 _object_types=[]
219 _raii_types=[]
220 _plural_types=[]
221 
222 
223 _IMP_foxs.IMP_DEBUG_swigconstant(_IMP_foxs)
224 IMP_DEBUG = _IMP_foxs.IMP_DEBUG
225 
226 _IMP_foxs.IMP_RELEASE_swigconstant(_IMP_foxs)
227 IMP_RELEASE = _IMP_foxs.IMP_RELEASE
228 
229 _IMP_foxs.IMP_SILENT_swigconstant(_IMP_foxs)
230 IMP_SILENT = _IMP_foxs.IMP_SILENT
231 
232 _IMP_foxs.IMP_PROGRESS_swigconstant(_IMP_foxs)
233 IMP_PROGRESS = _IMP_foxs.IMP_PROGRESS
234 
235 _IMP_foxs.IMP_TERSE_swigconstant(_IMP_foxs)
236 IMP_TERSE = _IMP_foxs.IMP_TERSE
237 
238 _IMP_foxs.IMP_VERBOSE_swigconstant(_IMP_foxs)
239 IMP_VERBOSE = _IMP_foxs.IMP_VERBOSE
240 
241 _IMP_foxs.IMP_MEMORY_swigconstant(_IMP_foxs)
242 IMP_MEMORY = _IMP_foxs.IMP_MEMORY
243 
244 _IMP_foxs.IMP_NONE_swigconstant(_IMP_foxs)
245 IMP_NONE = _IMP_foxs.IMP_NONE
246 
247 _IMP_foxs.IMP_USAGE_swigconstant(_IMP_foxs)
248 IMP_USAGE = _IMP_foxs.IMP_USAGE
249 
250 _IMP_foxs.IMP_INTERNAL_swigconstant(_IMP_foxs)
251 IMP_INTERNAL = _IMP_foxs.IMP_INTERNAL
252 
253 _IMP_foxs.IMP_KERNEL_HAS_LOG4CXX_swigconstant(_IMP_foxs)
254 IMP_KERNEL_HAS_LOG4CXX = _IMP_foxs.IMP_KERNEL_HAS_LOG4CXX
255 
256 _IMP_foxs.IMP_COMPILER_HAS_AUTO_swigconstant(_IMP_foxs)
257 IMP_COMPILER_HAS_AUTO = _IMP_foxs.IMP_COMPILER_HAS_AUTO
258 
259 _IMP_foxs.IMP_COMPILER_HAS_DEBUG_VECTOR_swigconstant(_IMP_foxs)
260 IMP_COMPILER_HAS_DEBUG_VECTOR = _IMP_foxs.IMP_COMPILER_HAS_DEBUG_VECTOR
261 
262 _IMP_foxs.IMP_COMPILER_HAS_UNIQUE_PTR_swigconstant(_IMP_foxs)
263 IMP_COMPILER_HAS_UNIQUE_PTR = _IMP_foxs.IMP_COMPILER_HAS_UNIQUE_PTR
264 
265 _IMP_foxs.IMP_KERNEL_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
266 IMP_KERNEL_HAS_BOOST_RANDOM = _IMP_foxs.IMP_KERNEL_HAS_BOOST_RANDOM
267 
268 _IMP_foxs.IMP_KERNEL_HAS_NUMPY_swigconstant(_IMP_foxs)
269 IMP_KERNEL_HAS_NUMPY = _IMP_foxs.IMP_KERNEL_HAS_NUMPY
270 
271 _IMP_foxs.IMP_KERNEL_HAS_GPERFTOOLS_swigconstant(_IMP_foxs)
272 IMP_KERNEL_HAS_GPERFTOOLS = _IMP_foxs.IMP_KERNEL_HAS_GPERFTOOLS
273 
274 _IMP_foxs.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER_swigconstant(_IMP_foxs)
275 IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER = _IMP_foxs.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER
276 
277 _IMP_foxs.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER_swigconstant(_IMP_foxs)
278 IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER = _IMP_foxs.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER
279 
280 _IMP_foxs.IMPKERNEL_SHOW_WARNINGS_swigconstant(_IMP_foxs)
281 IMPKERNEL_SHOW_WARNINGS = _IMP_foxs.IMPKERNEL_SHOW_WARNINGS
282 
283 import sys
284 class _DirectorObjects(object):
285  """@internal Simple class to keep references to director objects
286  to prevent premature deletion."""
287  def __init__(self):
288  self._objects = []
289  def register(self, obj):
290  """Take a reference to a director object; will only work for
291  refcounted C++ classes"""
292  if hasattr(obj, 'get_ref_count'):
293  self._objects.append(obj)
294  def cleanup(self):
295  """Only drop our reference and allow cleanup by Python if no other
296  Python references exist (we hold 3 references: one in self._objects,
297  one in x, and one in the argument list for getrefcount) *and* no
298  other C++ references exist (the Python object always holds one)"""
299  objs = [x for x in self._objects if sys.getrefcount(x) > 3 \
300  or x.get_ref_count() > 1]
301 # Do in two steps so the references are kept until the end of the
302 # function (deleting references may trigger a fresh call to this method)
303  self._objects = objs
304  def get_object_count(self):
305  """Get number of director objects (useful for testing only)"""
306  return len(self._objects)
307 _director_objects = _DirectorObjects()
308 
309 class _ostream(object):
310  """Proxy of C++ std::ostream class"""
311  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
312 
313  def __init__(self, *args, **kwargs):
314  raise AttributeError("No constructor defined")
315  __repr__ = _swig_repr
316 
317  def write(self, osa_buf):
318  """write(_ostream self, char const * osa_buf)"""
319  return _IMP_foxs._ostream_write(self, osa_buf)
320 
321 _ostream_swigregister = _IMP_foxs._ostream_swigregister
322 _ostream_swigregister(_ostream)
323 
324 
325 _IMP_foxs.IMP_COMPILER_HAS_OVERRIDE_swigconstant(_IMP_foxs)
326 IMP_COMPILER_HAS_OVERRIDE = _IMP_foxs.IMP_COMPILER_HAS_OVERRIDE
327 
328 _IMP_foxs.IMP_COMPILER_HAS_FINAL_swigconstant(_IMP_foxs)
329 IMP_COMPILER_HAS_FINAL = _IMP_foxs.IMP_COMPILER_HAS_FINAL
330 
331 _IMP_foxs.IMP_HAS_NOEXCEPT_swigconstant(_IMP_foxs)
332 IMP_HAS_NOEXCEPT = _IMP_foxs.IMP_HAS_NOEXCEPT
333 
334 _IMP_foxs.IMP_C_OPEN_BINARY_swigconstant(_IMP_foxs)
335 IMP_C_OPEN_BINARY = _IMP_foxs.IMP_C_OPEN_BINARY
336 import IMP
337 
338 _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
339 IMP_BENCHMARK_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_FILESYSTEM
340 
341 _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
342 IMP_BENCHMARK_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_PROGRAMOPTIONS
343 
344 _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
345 IMP_BENCHMARK_HAS_BOOST_RANDOM = _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_RANDOM
346 
347 _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
348 IMP_BENCHMARK_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_SYSTEM
349 
350 _IMP_foxs.IMP_BENCHMARK_HAS_NUMPY_swigconstant(_IMP_foxs)
351 IMP_BENCHMARK_HAS_NUMPY = _IMP_foxs.IMP_BENCHMARK_HAS_NUMPY
352 
353 _IMP_foxs.IMPBENCHMARK_SHOW_WARNINGS_swigconstant(_IMP_foxs)
354 IMPBENCHMARK_SHOW_WARNINGS = _IMP_foxs.IMPBENCHMARK_SHOW_WARNINGS
355 import IMP.benchmark
356 
357 _IMP_foxs.IMP_CGAL_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
358 IMP_CGAL_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_CGAL_HAS_BOOST_FILESYSTEM
359 
360 _IMP_foxs.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
361 IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS
362 
363 _IMP_foxs.IMP_CGAL_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
364 IMP_CGAL_HAS_BOOST_RANDOM = _IMP_foxs.IMP_CGAL_HAS_BOOST_RANDOM
365 
366 _IMP_foxs.IMP_CGAL_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
367 IMP_CGAL_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_CGAL_HAS_BOOST_SYSTEM
368 
369 _IMP_foxs.IMP_CGAL_HAS_NUMPY_swigconstant(_IMP_foxs)
370 IMP_CGAL_HAS_NUMPY = _IMP_foxs.IMP_CGAL_HAS_NUMPY
371 
372 _IMP_foxs.IMPCGAL_SHOW_WARNINGS_swigconstant(_IMP_foxs)
373 IMPCGAL_SHOW_WARNINGS = _IMP_foxs.IMPCGAL_SHOW_WARNINGS
374 import IMP.cgal
375 
376 _IMP_foxs.IMP_ALGEBRA_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
377 IMP_ALGEBRA_HAS_IMP_CGAL = _IMP_foxs.IMP_ALGEBRA_HAS_IMP_CGAL
378 
379 _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
380 IMP_ALGEBRA_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM
381 
382 _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
383 IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS
384 
385 _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
386 IMP_ALGEBRA_HAS_BOOST_RANDOM = _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_RANDOM
387 
388 _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
389 IMP_ALGEBRA_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_SYSTEM
390 
391 _IMP_foxs.IMP_ALGEBRA_HAS_CGAL_swigconstant(_IMP_foxs)
392 IMP_ALGEBRA_HAS_CGAL = _IMP_foxs.IMP_ALGEBRA_HAS_CGAL
393 
394 _IMP_foxs.IMP_ALGEBRA_HAS_NUMPY_swigconstant(_IMP_foxs)
395 IMP_ALGEBRA_HAS_NUMPY = _IMP_foxs.IMP_ALGEBRA_HAS_NUMPY
396 
397 _IMP_foxs.IMP_ALGEBRA_HAS_ANN_swigconstant(_IMP_foxs)
398 IMP_ALGEBRA_HAS_ANN = _IMP_foxs.IMP_ALGEBRA_HAS_ANN
399 
400 _IMP_foxs.IMPALGEBRA_SHOW_WARNINGS_swigconstant(_IMP_foxs)
401 IMPALGEBRA_SHOW_WARNINGS = _IMP_foxs.IMPALGEBRA_SHOW_WARNINGS
402 import IMP.algebra
403 
404 _IMP_foxs.IMP_DISPLAY_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
405 IMP_DISPLAY_HAS_IMP_CGAL = _IMP_foxs.IMP_DISPLAY_HAS_IMP_CGAL
406 
407 _IMP_foxs.IMP_DISPLAY_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
408 IMP_DISPLAY_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_DISPLAY_HAS_BOOST_FILESYSTEM
409 
410 _IMP_foxs.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
411 IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS
412 
413 _IMP_foxs.IMP_DISPLAY_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
414 IMP_DISPLAY_HAS_BOOST_RANDOM = _IMP_foxs.IMP_DISPLAY_HAS_BOOST_RANDOM
415 
416 _IMP_foxs.IMP_DISPLAY_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
417 IMP_DISPLAY_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_DISPLAY_HAS_BOOST_SYSTEM
418 
419 _IMP_foxs.IMP_DISPLAY_HAS_CGAL_swigconstant(_IMP_foxs)
420 IMP_DISPLAY_HAS_CGAL = _IMP_foxs.IMP_DISPLAY_HAS_CGAL
421 
422 _IMP_foxs.IMP_DISPLAY_HAS_NUMPY_swigconstant(_IMP_foxs)
423 IMP_DISPLAY_HAS_NUMPY = _IMP_foxs.IMP_DISPLAY_HAS_NUMPY
424 
425 _IMP_foxs.IMPDISPLAY_SHOW_WARNINGS_swigconstant(_IMP_foxs)
426 IMPDISPLAY_SHOW_WARNINGS = _IMP_foxs.IMPDISPLAY_SHOW_WARNINGS
427 import IMP.display
428 
429 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
430 IMP_SCORE_FUNCTOR_HAS_IMP_CGAL = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL
431 
432 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
433 IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM
434 
435 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
436 IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS
437 
438 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
439 IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM
440 
441 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
442 IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM
443 
444 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_CGAL_swigconstant(_IMP_foxs)
445 IMP_SCORE_FUNCTOR_HAS_CGAL = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_CGAL
446 
447 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_HDF5_swigconstant(_IMP_foxs)
448 IMP_SCORE_FUNCTOR_HAS_HDF5 = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_HDF5
449 
450 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_NUMPY_swigconstant(_IMP_foxs)
451 IMP_SCORE_FUNCTOR_HAS_NUMPY = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_NUMPY
452 
453 _IMP_foxs.IMPSCOREFUNCTOR_SHOW_WARNINGS_swigconstant(_IMP_foxs)
454 IMPSCOREFUNCTOR_SHOW_WARNINGS = _IMP_foxs.IMPSCOREFUNCTOR_SHOW_WARNINGS
455 import IMP.score_functor
456 
457 _IMP_foxs.IMP_CORE_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
458 IMP_CORE_HAS_IMP_CGAL = _IMP_foxs.IMP_CORE_HAS_IMP_CGAL
459 
460 _IMP_foxs.IMP_CORE_HAS_IMP_KERNEL_swigconstant(_IMP_foxs)
461 IMP_CORE_HAS_IMP_KERNEL = _IMP_foxs.IMP_CORE_HAS_IMP_KERNEL
462 
463 _IMP_foxs.IMP_CORE_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
464 IMP_CORE_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_CORE_HAS_BOOST_FILESYSTEM
465 
466 _IMP_foxs.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
467 IMP_CORE_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS
468 
469 _IMP_foxs.IMP_CORE_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
470 IMP_CORE_HAS_BOOST_RANDOM = _IMP_foxs.IMP_CORE_HAS_BOOST_RANDOM
471 
472 _IMP_foxs.IMP_CORE_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
473 IMP_CORE_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_CORE_HAS_BOOST_SYSTEM
474 
475 _IMP_foxs.IMP_CORE_HAS_CGAL_swigconstant(_IMP_foxs)
476 IMP_CORE_HAS_CGAL = _IMP_foxs.IMP_CORE_HAS_CGAL
477 
478 _IMP_foxs.IMP_CORE_HAS_HDF5_swigconstant(_IMP_foxs)
479 IMP_CORE_HAS_HDF5 = _IMP_foxs.IMP_CORE_HAS_HDF5
480 
481 _IMP_foxs.IMP_CORE_HAS_NUMPY_swigconstant(_IMP_foxs)
482 IMP_CORE_HAS_NUMPY = _IMP_foxs.IMP_CORE_HAS_NUMPY
483 
484 _IMP_foxs.IMPCORE_SHOW_WARNINGS_swigconstant(_IMP_foxs)
485 IMPCORE_SHOW_WARNINGS = _IMP_foxs.IMPCORE_SHOW_WARNINGS
486 import IMP.core
487 
488 _IMP_foxs.IMP_CONTAINER_HAS_IMP_ALGEBRA_swigconstant(_IMP_foxs)
489 IMP_CONTAINER_HAS_IMP_ALGEBRA = _IMP_foxs.IMP_CONTAINER_HAS_IMP_ALGEBRA
490 
491 _IMP_foxs.IMP_CONTAINER_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
492 IMP_CONTAINER_HAS_IMP_CGAL = _IMP_foxs.IMP_CONTAINER_HAS_IMP_CGAL
493 
494 _IMP_foxs.IMP_CONTAINER_HAS_IMP_DISPLAY_swigconstant(_IMP_foxs)
495 IMP_CONTAINER_HAS_IMP_DISPLAY = _IMP_foxs.IMP_CONTAINER_HAS_IMP_DISPLAY
496 
497 _IMP_foxs.IMP_CONTAINER_HAS_IMP_KERNEL_swigconstant(_IMP_foxs)
498 IMP_CONTAINER_HAS_IMP_KERNEL = _IMP_foxs.IMP_CONTAINER_HAS_IMP_KERNEL
499 
500 _IMP_foxs.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_foxs)
501 IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR = _IMP_foxs.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR
502 
503 _IMP_foxs.IMP_CONTAINER_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
504 IMP_CONTAINER_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_CONTAINER_HAS_BOOST_FILESYSTEM
505 
506 _IMP_foxs.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
507 IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS
508 
509 _IMP_foxs.IMP_CONTAINER_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
510 IMP_CONTAINER_HAS_BOOST_RANDOM = _IMP_foxs.IMP_CONTAINER_HAS_BOOST_RANDOM
511 
512 _IMP_foxs.IMP_CONTAINER_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
513 IMP_CONTAINER_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_CONTAINER_HAS_BOOST_SYSTEM
514 
515 _IMP_foxs.IMP_CONTAINER_HAS_CGAL_swigconstant(_IMP_foxs)
516 IMP_CONTAINER_HAS_CGAL = _IMP_foxs.IMP_CONTAINER_HAS_CGAL
517 
518 _IMP_foxs.IMP_CONTAINER_HAS_HDF5_swigconstant(_IMP_foxs)
519 IMP_CONTAINER_HAS_HDF5 = _IMP_foxs.IMP_CONTAINER_HAS_HDF5
520 
521 _IMP_foxs.IMP_CONTAINER_HAS_NUMPY_swigconstant(_IMP_foxs)
522 IMP_CONTAINER_HAS_NUMPY = _IMP_foxs.IMP_CONTAINER_HAS_NUMPY
523 
524 _IMP_foxs.IMP_CONTAINER_HAS_PYTHON_IHM_swigconstant(_IMP_foxs)
525 IMP_CONTAINER_HAS_PYTHON_IHM = _IMP_foxs.IMP_CONTAINER_HAS_PYTHON_IHM
526 
527 _IMP_foxs.IMP_CONTAINER_HAS_GOOGLE_DENSE_HASH_MAP_swigconstant(_IMP_foxs)
528 IMP_CONTAINER_HAS_GOOGLE_DENSE_HASH_MAP = _IMP_foxs.IMP_CONTAINER_HAS_GOOGLE_DENSE_HASH_MAP
529 
530 _IMP_foxs.IMP_CONTAINER_HAS_ROBIN_MAP_swigconstant(_IMP_foxs)
531 IMP_CONTAINER_HAS_ROBIN_MAP = _IMP_foxs.IMP_CONTAINER_HAS_ROBIN_MAP
532 
533 _IMP_foxs.IMPCONTAINER_SHOW_WARNINGS_swigconstant(_IMP_foxs)
534 IMPCONTAINER_SHOW_WARNINGS = _IMP_foxs.IMPCONTAINER_SHOW_WARNINGS
535 import IMP.container
536 
537 _IMP_foxs.IMP_ATOM_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
538 IMP_ATOM_HAS_IMP_CGAL = _IMP_foxs.IMP_ATOM_HAS_IMP_CGAL
539 
540 _IMP_foxs.IMP_ATOM_HAS_IMP_KERNEL_swigconstant(_IMP_foxs)
541 IMP_ATOM_HAS_IMP_KERNEL = _IMP_foxs.IMP_ATOM_HAS_IMP_KERNEL
542 
543 _IMP_foxs.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_foxs)
544 IMP_ATOM_HAS_IMP_SCORE_FUNCTOR = _IMP_foxs.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR
545 
546 _IMP_foxs.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
547 IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS
548 
549 _IMP_foxs.IMP_ATOM_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
550 IMP_ATOM_HAS_BOOST_RANDOM = _IMP_foxs.IMP_ATOM_HAS_BOOST_RANDOM
551 
552 _IMP_foxs.IMP_ATOM_HAS_BOOST_REGEX_swigconstant(_IMP_foxs)
553 IMP_ATOM_HAS_BOOST_REGEX = _IMP_foxs.IMP_ATOM_HAS_BOOST_REGEX
554 
555 _IMP_foxs.IMP_ATOM_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
556 IMP_ATOM_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_ATOM_HAS_BOOST_SYSTEM
557 
558 _IMP_foxs.IMP_ATOM_HAS_CGAL_swigconstant(_IMP_foxs)
559 IMP_ATOM_HAS_CGAL = _IMP_foxs.IMP_ATOM_HAS_CGAL
560 
561 _IMP_foxs.IMP_ATOM_HAS_HDF5_swigconstant(_IMP_foxs)
562 IMP_ATOM_HAS_HDF5 = _IMP_foxs.IMP_ATOM_HAS_HDF5
563 
564 _IMP_foxs.IMP_ATOM_HAS_NUMPY_swigconstant(_IMP_foxs)
565 IMP_ATOM_HAS_NUMPY = _IMP_foxs.IMP_ATOM_HAS_NUMPY
566 
567 _IMP_foxs.IMP_ATOM_HAS_PYTHON_IHM_swigconstant(_IMP_foxs)
568 IMP_ATOM_HAS_PYTHON_IHM = _IMP_foxs.IMP_ATOM_HAS_PYTHON_IHM
569 
570 _IMP_foxs.IMPATOM_SHOW_WARNINGS_swigconstant(_IMP_foxs)
571 IMPATOM_SHOW_WARNINGS = _IMP_foxs.IMPATOM_SHOW_WARNINGS
572 
573 _IMP_foxs.IMP_ATOM_TYPE_INDEX_swigconstant(_IMP_foxs)
574 IMP_ATOM_TYPE_INDEX = _IMP_foxs.IMP_ATOM_TYPE_INDEX
575 
576 _IMP_foxs.IMP_RESIDUE_TYPE_INDEX_swigconstant(_IMP_foxs)
577 IMP_RESIDUE_TYPE_INDEX = _IMP_foxs.IMP_RESIDUE_TYPE_INDEX
578 
579 _IMP_foxs.IMP_HIERARCHY_TYPE_INDEX_swigconstant(_IMP_foxs)
580 IMP_HIERARCHY_TYPE_INDEX = _IMP_foxs.IMP_HIERARCHY_TYPE_INDEX
581 
582 _IMP_foxs.IMP_CHAIN_TYPE_INDEX_swigconstant(_IMP_foxs)
583 IMP_CHAIN_TYPE_INDEX = _IMP_foxs.IMP_CHAIN_TYPE_INDEX
584 import IMP.atom
585 
586 _IMP_foxs.IMP_SAXS_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
587 IMP_SAXS_HAS_IMP_CGAL = _IMP_foxs.IMP_SAXS_HAS_IMP_CGAL
588 
589 _IMP_foxs.IMP_SAXS_HAS_IMP_CONTAINER_swigconstant(_IMP_foxs)
590 IMP_SAXS_HAS_IMP_CONTAINER = _IMP_foxs.IMP_SAXS_HAS_IMP_CONTAINER
591 
592 _IMP_foxs.IMP_SAXS_HAS_IMP_DISPLAY_swigconstant(_IMP_foxs)
593 IMP_SAXS_HAS_IMP_DISPLAY = _IMP_foxs.IMP_SAXS_HAS_IMP_DISPLAY
594 
595 _IMP_foxs.IMP_SAXS_HAS_IMP_KERNEL_swigconstant(_IMP_foxs)
596 IMP_SAXS_HAS_IMP_KERNEL = _IMP_foxs.IMP_SAXS_HAS_IMP_KERNEL
597 
598 _IMP_foxs.IMP_SAXS_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_foxs)
599 IMP_SAXS_HAS_IMP_SCORE_FUNCTOR = _IMP_foxs.IMP_SAXS_HAS_IMP_SCORE_FUNCTOR
600 
601 _IMP_foxs.IMP_SAXS_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
602 IMP_SAXS_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_SAXS_HAS_BOOST_FILESYSTEM
603 
604 _IMP_foxs.IMP_SAXS_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
605 IMP_SAXS_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_SAXS_HAS_BOOST_PROGRAMOPTIONS
606 
607 _IMP_foxs.IMP_SAXS_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
608 IMP_SAXS_HAS_BOOST_RANDOM = _IMP_foxs.IMP_SAXS_HAS_BOOST_RANDOM
609 
610 _IMP_foxs.IMP_SAXS_HAS_BOOST_REGEX_swigconstant(_IMP_foxs)
611 IMP_SAXS_HAS_BOOST_REGEX = _IMP_foxs.IMP_SAXS_HAS_BOOST_REGEX
612 
613 _IMP_foxs.IMP_SAXS_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
614 IMP_SAXS_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_SAXS_HAS_BOOST_SYSTEM
615 
616 _IMP_foxs.IMP_SAXS_HAS_CGAL_swigconstant(_IMP_foxs)
617 IMP_SAXS_HAS_CGAL = _IMP_foxs.IMP_SAXS_HAS_CGAL
618 
619 _IMP_foxs.IMP_SAXS_HAS_HDF5_swigconstant(_IMP_foxs)
620 IMP_SAXS_HAS_HDF5 = _IMP_foxs.IMP_SAXS_HAS_HDF5
621 
622 _IMP_foxs.IMP_SAXS_HAS_NUMPY_swigconstant(_IMP_foxs)
623 IMP_SAXS_HAS_NUMPY = _IMP_foxs.IMP_SAXS_HAS_NUMPY
624 
625 _IMP_foxs.IMP_SAXS_HAS_PYTHON_IHM_swigconstant(_IMP_foxs)
626 IMP_SAXS_HAS_PYTHON_IHM = _IMP_foxs.IMP_SAXS_HAS_PYTHON_IHM
627 
628 _IMP_foxs.IMPSAXS_SHOW_WARNINGS_swigconstant(_IMP_foxs)
629 IMPSAXS_SHOW_WARNINGS = _IMP_foxs.IMPSAXS_SHOW_WARNINGS
630 import IMP.saxs
631 
632 _IMP_foxs.IMP_FOXS_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
633 IMP_FOXS_HAS_IMP_CGAL = _IMP_foxs.IMP_FOXS_HAS_IMP_CGAL
634 
635 _IMP_foxs.IMP_FOXS_HAS_IMP_CONTAINER_swigconstant(_IMP_foxs)
636 IMP_FOXS_HAS_IMP_CONTAINER = _IMP_foxs.IMP_FOXS_HAS_IMP_CONTAINER
637 
638 _IMP_foxs.IMP_FOXS_HAS_IMP_DISPLAY_swigconstant(_IMP_foxs)
639 IMP_FOXS_HAS_IMP_DISPLAY = _IMP_foxs.IMP_FOXS_HAS_IMP_DISPLAY
640 
641 _IMP_foxs.IMP_FOXS_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_foxs)
642 IMP_FOXS_HAS_IMP_SCORE_FUNCTOR = _IMP_foxs.IMP_FOXS_HAS_IMP_SCORE_FUNCTOR
643 
644 _IMP_foxs.IMP_FOXS_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
645 IMP_FOXS_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_FOXS_HAS_BOOST_FILESYSTEM
646 
647 _IMP_foxs.IMP_FOXS_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
648 IMP_FOXS_HAS_BOOST_RANDOM = _IMP_foxs.IMP_FOXS_HAS_BOOST_RANDOM
649 
650 _IMP_foxs.IMP_FOXS_HAS_BOOST_REGEX_swigconstant(_IMP_foxs)
651 IMP_FOXS_HAS_BOOST_REGEX = _IMP_foxs.IMP_FOXS_HAS_BOOST_REGEX
652 
653 _IMP_foxs.IMP_FOXS_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
654 IMP_FOXS_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_FOXS_HAS_BOOST_SYSTEM
655 
656 _IMP_foxs.IMP_FOXS_HAS_CGAL_swigconstant(_IMP_foxs)
657 IMP_FOXS_HAS_CGAL = _IMP_foxs.IMP_FOXS_HAS_CGAL
658 
659 _IMP_foxs.IMP_FOXS_HAS_HDF5_swigconstant(_IMP_foxs)
660 IMP_FOXS_HAS_HDF5 = _IMP_foxs.IMP_FOXS_HAS_HDF5
661 
662 _IMP_foxs.IMP_FOXS_HAS_NUMPY_swigconstant(_IMP_foxs)
663 IMP_FOXS_HAS_NUMPY = _IMP_foxs.IMP_FOXS_HAS_NUMPY
664 
665 _IMP_foxs.IMP_FOXS_HAS_PYTHON_IHM_swigconstant(_IMP_foxs)
666 IMP_FOXS_HAS_PYTHON_IHM = _IMP_foxs.IMP_FOXS_HAS_PYTHON_IHM
667 
668 _IMP_foxs.IMPFOXS_SHOW_WARNINGS_swigconstant(_IMP_foxs)
669 IMPFOXS_SHOW_WARNINGS = _IMP_foxs.IMPFOXS_SHOW_WARNINGS
670 
671 def get_module_version():
672  """get_module_version() -> std::string const"""
673  return _IMP_foxs.get_module_version()
674 
675 def get_example_path(fname):
676  """get_example_path(std::string fname) -> std::string"""
677  return _IMP_foxs.get_example_path(fname)
678 
679 def get_data_path(fname):
680  """get_data_path(std::string fname) -> std::string"""
681  return _IMP_foxs.get_data_path(fname)
682 
683 from . import _version_check
684 _version_check.check_version(get_module_version())
685 __version__ = get_module_version()
686 
687 
688 
IMP::container
Various classes to hold sets of particles.
IMP::cgal
Make CGAL functionality available to IMP.
IMP::score_functor
Composable functors to implement scores via compile-time composition.
IMP::core
Basic functionality that is expected to be used by a wide variety of IMP users.
IMP::algebra
General purpose algebraic and geometric methods that are expected to be used by a wide variety of IMP...
IMP::example::get_module_version
std::string get_module_version()
Return the version of this module, as a string.
Definition: EMageFit/__init__.py:5
IMP::example::get_example_path
std::string get_example_path(std::string file_name)
Return the full path to one of this module's example files.
IMP::display
Output IMP model data in various file formats.
IMP::atom
Functionality for loading, creating, manipulating and scoring atomic structures.
IMP::benchmark
Support for developing and analyzing benchmarks of IMP code.
IMP::example::get_data_path
std::string get_data_path(std::string file_name)
Return the full path to one of this module's data files.
IMP::saxs
Support for small angle X-ray scattering (SAXS) data.