| add_score_and_derivatives(ScoreAccumulator sa) const | IMP::Restraint | |
| add_score_and_derivatives_moved(ScoreAccumulator sa, const ParticleIndexes &moved_pis, const ParticleIndexes &reset_pis) const (defined in IMP::Restraint) | IMP::Restraint | |
| argmax_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| calc_prefactor(Float s1, Float w1, Float s2, Float w2) const (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| calc_prod(Float s1, Float s2) const (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| calc_score(Float dist, Float prod) const (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| clear_caches() | IMP::Object | virtual |
| create_current_decomposition() const | IMP::Restraint | |
| create_decomposition() const | IMP::Restraint | |
| create_scoring_function(double weight=1.0, double max=NO_MAX) const | IMP::Restraint | virtual |
| cutoff_dist_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| dd_score_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| density_ps_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| density_sigs_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| density_weights_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| do_add_score_and_derivatives(ScoreAccumulator sa) const (defined in IMP::Restraint) | IMP::Restraint | protectedvirtual |
| do_add_score_and_derivatives_moved(ScoreAccumulator sa, const ParticleIndexes &moved_pis, const ParticleIndexes &reset_pis) const (defined in IMP::Restraint) | IMP::Restraint | protectedvirtual |
| do_create_current_decomposition() const | IMP::Restraint | protectedvirtual |
| do_create_decomposition() const | IMP::Restraint | protectedvirtual |
| do_destroy() | IMP::Object | protectedvirtual |
| do_get_inputs() const | IMP::isd::GaussianAnchorEMRestraint | virtual |
| do_get_interactions() const | IMP::ModelObject | protectedvirtual |
| do_get_outputs() const | IMP::Restraint | protectedvirtual |
| dsize_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| exp_grid_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| GaussianAnchorEMRestraint(ParticlesTemp model_ps, Floats model_sigs, Floats model_weights, ParticlesTemp density_ps, Floats density_sigs, Floats density_weights, Particle *global_sigma, Float cutoff_dist, bool rigid, bool tabexp, std::string name="GaussianAnchorEMRestraint%1%") | IMP::isd::GaussianAnchorEMRestraint | |
| get_check_level() const (defined in IMP::Object) | IMP::Object | |
| get_density_particles() const (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | |
| get_dynamic_info() const | IMP::Restraint | virtual |
| get_has_dependencies() const | IMP::ModelObject | |
| get_has_required_score_states() const | IMP::ModelObject | |
| get_inputs() const | IMP::ModelObject | |
| get_interactions() const | IMP::ModelObject | |
| get_last_last_score() const | IMP::Restraint | virtual |
| get_last_score() const | IMP::Restraint | virtual |
| get_log_level() const (defined in IMP::Object) | IMP::Object | |
| get_maximum_score() const (defined in IMP::Restraint) | IMP::Restraint | |
| get_model() const (defined in IMP::ModelObject) | IMP::ModelObject | |
| get_name() const (defined in IMP::Object) | IMP::Object | |
| get_outputs() const | IMP::ModelObject | |
| get_probability() const (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | virtual |
| get_required_score_states() const | IMP::ModelObject | |
| get_score() const | IMP::Restraint | |
| get_static_info() const | IMP::Restraint | virtual |
| get_type_name() const (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | virtual |
| get_version_info() const | IMP::isd::GaussianAnchorEMRestraint | virtual |
| get_was_good() const | IMP::Restraint | |
| get_weight() const (defined in IMP::Restraint) | IMP::Restraint | |
| global_sigma_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| handle_set_has_required_score_states(bool) | IMP::ModelObject | protectedvirtual |
| init_mm_score_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| invdx_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| ISDRestraint(Model *m, std::string name) | IMP::isd::ISDRestraint | |
| md_container_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| md_prefactors_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| md_prods_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| mm_prefactors_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| mm_prods_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| model_ps_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| model_sigs_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| model_weights_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| ModelObject(Model *m, std::string name) (defined in IMP::ModelObject) | IMP::ModelObject | |
| msize_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| NonCopyable() (defined in IMP::NonCopyable) | IMP::NonCopyable | protected |
| Object(std::string name) | IMP::Object | protected |
| Restraint(Model *m, std::string name) | IMP::Restraint | |
| rigid_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| set_check_level(CheckLevel l) | IMP::Object | |
| set_has_dependencies(bool tf) | IMP::ModelObject | |
| set_has_required_score_states(bool tf) | IMP::ModelObject | |
| set_log_level(LogLevel l) | IMP::Object | |
| set_maximum_score(double s) (defined in IMP::Restraint) | IMP::Restraint | |
| set_name(std::string name) (defined in IMP::Object) | IMP::Object | |
| set_was_used(bool tf) const | IMP::Object | |
| set_weight(Float weight) (defined in IMP::Restraint) | IMP::Restraint | |
| show(std::ostream &out=std::cout) const (defined in IMP::Object) | IMP::Object | |
| tabexp_ (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protected |
| unprotected_evaluate(IMP::DerivativeAccumulator *accum) const (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | virtual |
| ~GaussianAnchorEMRestraint() (defined in IMP::isd::GaussianAnchorEMRestraint) | IMP::isd::GaussianAnchorEMRestraint | protectedvirtual |
| ~ISDRestraint() (defined in IMP::isd::ISDRestraint) | IMP::isd::ISDRestraint | protectedvirtual |
| ~ModelObject() (defined in IMP::ModelObject) | IMP::ModelObject | |
| ~Object() (defined in IMP::Object) | IMP::Object | virtual |
