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IMP Reference Guide  2.15.0
The Integrative Modeling Platform
score_functor/__init__.py
1 # This file was automatically generated by SWIG (http://www.swig.org).
2 # Version 3.0.7
3 #
4 # Do not make changes to this file unless you know what you are doing--modify
5 # the SWIG interface file instead.
6 
7 # This wrapper is part of IMP,
8 # Copyright 2007-2021 IMP Inventors. All rights reserved.
9 
10 from __future__ import print_function, division, absolute_import
11 
12 
13 
14 
15 from sys import version_info
16 if version_info >= (2, 6, 0):
17  def swig_import_helper():
18  from os.path import dirname
19  import imp
20  fp = None
21  try:
22  fp, pathname, description = imp.find_module('_IMP_score_functor', [dirname(__file__)])
23  except ImportError:
24  import _IMP_score_functor
25  return _IMP_score_functor
26  if fp is not None:
27  try:
28  _mod = imp.load_module('_IMP_score_functor', fp, pathname, description)
29  finally:
30  fp.close()
31  return _mod
32  _IMP_score_functor = swig_import_helper()
33  del swig_import_helper
34 else:
35  import _IMP_score_functor
36 del version_info
37 try:
38  _swig_property = property
39 except NameError:
40  pass # Python < 2.2 doesn't have 'property'.
41 
42 
43 def _swig_setattr_nondynamic(self, class_type, name, value, static=1):
44  if (name == "thisown"):
45  return self.this.own(value)
46  if (name == "this"):
47  if type(value).__name__ == 'SwigPyObject':
48  self.__dict__[name] = value
49  return
50  method = class_type.__swig_setmethods__.get(name, None)
51  if method:
52  return method(self, value)
53  if (not static):
54  object.__setattr__(self, name, value)
55  else:
56  raise AttributeError("You cannot add attributes to %s" % self)
57 
58 
59 def _swig_setattr(self, class_type, name, value):
60  return _swig_setattr_nondynamic(self, class_type, name, value, 0)
61 
62 
63 def _swig_getattr_nondynamic(self, class_type, name, static=1):
64  if (name == "thisown"):
65  return self.this.own()
66  method = class_type.__swig_getmethods__.get(name, None)
67  if method:
68  return method(self)
69  if (not static):
70  return object.__getattr__(self, name)
71  else:
72  raise AttributeError(name)
73 
74 def _swig_getattr(self, class_type, name):
75  return _swig_getattr_nondynamic(self, class_type, name, 0)
76 
77 
78 def _swig_repr(self):
79  try:
80  strthis = "proxy of " + self.this.__repr__()
81  except:
82  strthis = ""
83  return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
84 
85 try:
86  _object = object
87  _newclass = 1
88 except AttributeError:
89  class _object:
90  pass
91  _newclass = 0
92 
93 
94 
95 def _swig_setattr_nondynamic_method(set):
96  def set_attr(self, name, value):
97  if (name == "thisown"):
98  return self.this.own(value)
99  if hasattr(self, name) or (name == "this"):
100  set(self, name, value)
101  else:
102  raise AttributeError("You cannot add attributes to %s" % self)
103  return set_attr
104 
105 
106 try:
107  import weakref
108  weakref_proxy = weakref.proxy
109 except:
110  weakref_proxy = lambda x: x
111 
112 
113 class IMP_SCORE_FUNCTOR_SwigPyIterator(object):
114  """Proxy of C++ swig::IMP_SCORE_FUNCTOR_SwigPyIterator class"""
115  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
116 
117  def __init__(self, *args, **kwargs):
118  raise AttributeError("No constructor defined - class is abstract")
119  __repr__ = _swig_repr
120  __swig_destroy__ = _IMP_score_functor.delete_IMP_SCORE_FUNCTOR_SwigPyIterator
121  __del__ = lambda self: None
122 
123  def value(self):
124  """value(IMP_SCORE_FUNCTOR_SwigPyIterator self) -> PyObject *"""
125  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_value(self)
126 
127 
128  def incr(self, n=1):
129  """
130  incr(IMP_SCORE_FUNCTOR_SwigPyIterator self, size_t n=1) -> IMP_SCORE_FUNCTOR_SwigPyIterator
131  incr(IMP_SCORE_FUNCTOR_SwigPyIterator self) -> IMP_SCORE_FUNCTOR_SwigPyIterator
132  """
133  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_incr(self, n)
134 
135 
136  def decr(self, n=1):
137  """
138  decr(IMP_SCORE_FUNCTOR_SwigPyIterator self, size_t n=1) -> IMP_SCORE_FUNCTOR_SwigPyIterator
139  decr(IMP_SCORE_FUNCTOR_SwigPyIterator self) -> IMP_SCORE_FUNCTOR_SwigPyIterator
140  """
141  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_decr(self, n)
142 
143 
144  def distance(self, x):
145  """distance(IMP_SCORE_FUNCTOR_SwigPyIterator self, IMP_SCORE_FUNCTOR_SwigPyIterator x) -> ptrdiff_t"""
146  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_distance(self, x)
147 
148 
149  def equal(self, x):
150  """equal(IMP_SCORE_FUNCTOR_SwigPyIterator self, IMP_SCORE_FUNCTOR_SwigPyIterator x) -> bool"""
151  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_equal(self, x)
152 
153 
154  def copy(self):
155  """copy(IMP_SCORE_FUNCTOR_SwigPyIterator self) -> IMP_SCORE_FUNCTOR_SwigPyIterator"""
156  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_copy(self)
157 
158 
159  def next(self):
160  """next(IMP_SCORE_FUNCTOR_SwigPyIterator self) -> PyObject *"""
161  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_next(self)
162 
163 
164  def __next__(self):
165  """__next__(IMP_SCORE_FUNCTOR_SwigPyIterator self) -> PyObject *"""
166  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator___next__(self)
167 
168 
169  def previous(self):
170  """previous(IMP_SCORE_FUNCTOR_SwigPyIterator self) -> PyObject *"""
171  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_previous(self)
172 
173 
174  def advance(self, n):
175  """advance(IMP_SCORE_FUNCTOR_SwigPyIterator self, ptrdiff_t n) -> IMP_SCORE_FUNCTOR_SwigPyIterator"""
176  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_advance(self, n)
177 
178 
179  def __eq__(self, x):
180  """__eq__(IMP_SCORE_FUNCTOR_SwigPyIterator self, IMP_SCORE_FUNCTOR_SwigPyIterator x) -> bool"""
181  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator___eq__(self, x)
182 
183 
184  def __ne__(self, x):
185  """__ne__(IMP_SCORE_FUNCTOR_SwigPyIterator self, IMP_SCORE_FUNCTOR_SwigPyIterator x) -> bool"""
186  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator___ne__(self, x)
187 
188 
189  def __iadd__(self, n):
190  """__iadd__(IMP_SCORE_FUNCTOR_SwigPyIterator self, ptrdiff_t n) -> IMP_SCORE_FUNCTOR_SwigPyIterator"""
191  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator___iadd__(self, n)
192 
193 
194  def __isub__(self, n):
195  """__isub__(IMP_SCORE_FUNCTOR_SwigPyIterator self, ptrdiff_t n) -> IMP_SCORE_FUNCTOR_SwigPyIterator"""
196  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator___isub__(self, n)
197 
198 
199  def __add__(self, n):
200  """__add__(IMP_SCORE_FUNCTOR_SwigPyIterator self, ptrdiff_t n) -> IMP_SCORE_FUNCTOR_SwigPyIterator"""
201  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator___add__(self, n)
202 
203 
204  def __sub__(self, *args):
205  """
206  __sub__(IMP_SCORE_FUNCTOR_SwigPyIterator self, ptrdiff_t n) -> IMP_SCORE_FUNCTOR_SwigPyIterator
207  __sub__(IMP_SCORE_FUNCTOR_SwigPyIterator self, IMP_SCORE_FUNCTOR_SwigPyIterator x) -> ptrdiff_t
208  """
209  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator___sub__(self, *args)
210 
211  def __iter__(self):
212  return self
213 IMP_SCORE_FUNCTOR_SwigPyIterator_swigregister = _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_swigregister
214 IMP_SCORE_FUNCTOR_SwigPyIterator_swigregister(IMP_SCORE_FUNCTOR_SwigPyIterator)
215 
216 
217 _value_types=[]
218 _object_types=[]
219 _raii_types=[]
220 _plural_types=[]
221 
222 
223 _IMP_score_functor.IMP_DEBUG_swigconstant(_IMP_score_functor)
224 IMP_DEBUG = _IMP_score_functor.IMP_DEBUG
225 
226 _IMP_score_functor.IMP_RELEASE_swigconstant(_IMP_score_functor)
227 IMP_RELEASE = _IMP_score_functor.IMP_RELEASE
228 
229 _IMP_score_functor.IMP_SILENT_swigconstant(_IMP_score_functor)
230 IMP_SILENT = _IMP_score_functor.IMP_SILENT
231 
232 _IMP_score_functor.IMP_PROGRESS_swigconstant(_IMP_score_functor)
233 IMP_PROGRESS = _IMP_score_functor.IMP_PROGRESS
234 
235 _IMP_score_functor.IMP_TERSE_swigconstant(_IMP_score_functor)
236 IMP_TERSE = _IMP_score_functor.IMP_TERSE
237 
238 _IMP_score_functor.IMP_VERBOSE_swigconstant(_IMP_score_functor)
239 IMP_VERBOSE = _IMP_score_functor.IMP_VERBOSE
240 
241 _IMP_score_functor.IMP_MEMORY_swigconstant(_IMP_score_functor)
242 IMP_MEMORY = _IMP_score_functor.IMP_MEMORY
243 
244 _IMP_score_functor.IMP_NONE_swigconstant(_IMP_score_functor)
245 IMP_NONE = _IMP_score_functor.IMP_NONE
246 
247 _IMP_score_functor.IMP_USAGE_swigconstant(_IMP_score_functor)
248 IMP_USAGE = _IMP_score_functor.IMP_USAGE
249 
250 _IMP_score_functor.IMP_INTERNAL_swigconstant(_IMP_score_functor)
251 IMP_INTERNAL = _IMP_score_functor.IMP_INTERNAL
252 
253 _IMP_score_functor.IMP_KERNEL_HAS_LOG4CXX_swigconstant(_IMP_score_functor)
254 IMP_KERNEL_HAS_LOG4CXX = _IMP_score_functor.IMP_KERNEL_HAS_LOG4CXX
255 
256 _IMP_score_functor.IMP_COMPILER_HAS_AUTO_swigconstant(_IMP_score_functor)
257 IMP_COMPILER_HAS_AUTO = _IMP_score_functor.IMP_COMPILER_HAS_AUTO
258 
259 _IMP_score_functor.IMP_COMPILER_HAS_DEBUG_VECTOR_swigconstant(_IMP_score_functor)
260 IMP_COMPILER_HAS_DEBUG_VECTOR = _IMP_score_functor.IMP_COMPILER_HAS_DEBUG_VECTOR
261 
262 _IMP_score_functor.IMP_COMPILER_HAS_UNIQUE_PTR_swigconstant(_IMP_score_functor)
263 IMP_COMPILER_HAS_UNIQUE_PTR = _IMP_score_functor.IMP_COMPILER_HAS_UNIQUE_PTR
264 
265 _IMP_score_functor.IMP_KERNEL_HAS_BOOST_RANDOM_swigconstant(_IMP_score_functor)
266 IMP_KERNEL_HAS_BOOST_RANDOM = _IMP_score_functor.IMP_KERNEL_HAS_BOOST_RANDOM
267 
268 _IMP_score_functor.IMP_KERNEL_HAS_NUMPY_swigconstant(_IMP_score_functor)
269 IMP_KERNEL_HAS_NUMPY = _IMP_score_functor.IMP_KERNEL_HAS_NUMPY
270 
271 _IMP_score_functor.IMP_KERNEL_HAS_GPERFTOOLS_swigconstant(_IMP_score_functor)
272 IMP_KERNEL_HAS_GPERFTOOLS = _IMP_score_functor.IMP_KERNEL_HAS_GPERFTOOLS
273 
274 _IMP_score_functor.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER_swigconstant(_IMP_score_functor)
275 IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER = _IMP_score_functor.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER
276 
277 _IMP_score_functor.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER_swigconstant(_IMP_score_functor)
278 IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER = _IMP_score_functor.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER
279 
280 _IMP_score_functor.IMPKERNEL_SHOW_WARNINGS_swigconstant(_IMP_score_functor)
281 IMPKERNEL_SHOW_WARNINGS = _IMP_score_functor.IMPKERNEL_SHOW_WARNINGS
282 
283 import sys
284 class _DirectorObjects(object):
285  """@internal Simple class to keep references to director objects
286  to prevent premature deletion."""
287  def __init__(self):
288  self._objects = []
289  def register(self, obj):
290  """Take a reference to a director object; will only work for
291  refcounted C++ classes"""
292  if hasattr(obj, 'get_ref_count'):
293  self._objects.append(obj)
294  def cleanup(self):
295  """Only drop our reference and allow cleanup by Python if no other
296  Python references exist (we hold 3 references: one in self._objects,
297  one in x, and one in the argument list for getrefcount) *and* no
298  other C++ references exist (the Python object always holds one)"""
299  objs = [x for x in self._objects if sys.getrefcount(x) > 3 \
300  or x.get_ref_count() > 1]
301 # Do in two steps so the references are kept until the end of the
302 # function (deleting references may trigger a fresh call to this method)
303  self._objects = objs
304  def get_object_count(self):
305  """Get number of director objects (useful for testing only)"""
306  return len(self._objects)
307 _director_objects = _DirectorObjects()
308 
309 class _ostream(object):
310  """Proxy of C++ std::ostream class"""
311  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
312 
313  def __init__(self, *args, **kwargs):
314  raise AttributeError("No constructor defined")
315  __repr__ = _swig_repr
316 
317  def write(self, osa_buf):
318  """write(_ostream self, char const * osa_buf)"""
319  return _IMP_score_functor._ostream_write(self, osa_buf)
320 
321 _ostream_swigregister = _IMP_score_functor._ostream_swigregister
322 _ostream_swigregister(_ostream)
323 
324 
325 _IMP_score_functor.IMP_COMPILER_HAS_OVERRIDE_swigconstant(_IMP_score_functor)
326 IMP_COMPILER_HAS_OVERRIDE = _IMP_score_functor.IMP_COMPILER_HAS_OVERRIDE
327 
328 _IMP_score_functor.IMP_COMPILER_HAS_FINAL_swigconstant(_IMP_score_functor)
329 IMP_COMPILER_HAS_FINAL = _IMP_score_functor.IMP_COMPILER_HAS_FINAL
330 
331 _IMP_score_functor.IMP_HAS_NOEXCEPT_swigconstant(_IMP_score_functor)
332 IMP_HAS_NOEXCEPT = _IMP_score_functor.IMP_HAS_NOEXCEPT
333 
334 _IMP_score_functor.IMP_C_OPEN_BINARY_swigconstant(_IMP_score_functor)
335 IMP_C_OPEN_BINARY = _IMP_score_functor.IMP_C_OPEN_BINARY
336 import IMP
337 
338 _IMP_score_functor.IMP_CGAL_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_score_functor)
339 IMP_CGAL_HAS_BOOST_FILESYSTEM = _IMP_score_functor.IMP_CGAL_HAS_BOOST_FILESYSTEM
340 
341 _IMP_score_functor.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_score_functor)
342 IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS = _IMP_score_functor.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS
343 
344 _IMP_score_functor.IMP_CGAL_HAS_BOOST_RANDOM_swigconstant(_IMP_score_functor)
345 IMP_CGAL_HAS_BOOST_RANDOM = _IMP_score_functor.IMP_CGAL_HAS_BOOST_RANDOM
346 
347 _IMP_score_functor.IMP_CGAL_HAS_BOOST_SYSTEM_swigconstant(_IMP_score_functor)
348 IMP_CGAL_HAS_BOOST_SYSTEM = _IMP_score_functor.IMP_CGAL_HAS_BOOST_SYSTEM
349 
350 _IMP_score_functor.IMP_CGAL_HAS_NUMPY_swigconstant(_IMP_score_functor)
351 IMP_CGAL_HAS_NUMPY = _IMP_score_functor.IMP_CGAL_HAS_NUMPY
352 
353 _IMP_score_functor.IMPCGAL_SHOW_WARNINGS_swigconstant(_IMP_score_functor)
354 IMPCGAL_SHOW_WARNINGS = _IMP_score_functor.IMPCGAL_SHOW_WARNINGS
355 import IMP.cgal
356 
357 _IMP_score_functor.IMP_ALGEBRA_HAS_IMP_CGAL_swigconstant(_IMP_score_functor)
358 IMP_ALGEBRA_HAS_IMP_CGAL = _IMP_score_functor.IMP_ALGEBRA_HAS_IMP_CGAL
359 
360 _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_score_functor)
361 IMP_ALGEBRA_HAS_BOOST_FILESYSTEM = _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM
362 
363 _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_score_functor)
364 IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS = _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS
365 
366 _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_RANDOM_swigconstant(_IMP_score_functor)
367 IMP_ALGEBRA_HAS_BOOST_RANDOM = _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_RANDOM
368 
369 _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_SYSTEM_swigconstant(_IMP_score_functor)
370 IMP_ALGEBRA_HAS_BOOST_SYSTEM = _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_SYSTEM
371 
372 _IMP_score_functor.IMP_ALGEBRA_HAS_CGAL_swigconstant(_IMP_score_functor)
373 IMP_ALGEBRA_HAS_CGAL = _IMP_score_functor.IMP_ALGEBRA_HAS_CGAL
374 
375 _IMP_score_functor.IMP_ALGEBRA_HAS_NUMPY_swigconstant(_IMP_score_functor)
376 IMP_ALGEBRA_HAS_NUMPY = _IMP_score_functor.IMP_ALGEBRA_HAS_NUMPY
377 
378 _IMP_score_functor.IMP_ALGEBRA_HAS_ANN_swigconstant(_IMP_score_functor)
379 IMP_ALGEBRA_HAS_ANN = _IMP_score_functor.IMP_ALGEBRA_HAS_ANN
380 
381 _IMP_score_functor.IMPALGEBRA_SHOW_WARNINGS_swigconstant(_IMP_score_functor)
382 IMPALGEBRA_SHOW_WARNINGS = _IMP_score_functor.IMPALGEBRA_SHOW_WARNINGS
383 import IMP.algebra
384 
385 _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL_swigconstant(_IMP_score_functor)
386 IMP_SCORE_FUNCTOR_HAS_IMP_CGAL = _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL
387 
388 _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_score_functor)
389 IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM = _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM
390 
391 _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_score_functor)
392 IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS = _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS
393 
394 _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM_swigconstant(_IMP_score_functor)
395 IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM = _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM
396 
397 _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM_swigconstant(_IMP_score_functor)
398 IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM = _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM
399 
400 _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_CGAL_swigconstant(_IMP_score_functor)
401 IMP_SCORE_FUNCTOR_HAS_CGAL = _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_CGAL
402 
403 _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_HDF5_swigconstant(_IMP_score_functor)
404 IMP_SCORE_FUNCTOR_HAS_HDF5 = _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_HDF5
405 
406 _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_NUMPY_swigconstant(_IMP_score_functor)
407 IMP_SCORE_FUNCTOR_HAS_NUMPY = _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_NUMPY
408 
409 _IMP_score_functor.IMPSCOREFUNCTOR_SHOW_WARNINGS_swigconstant(_IMP_score_functor)
410 IMPSCOREFUNCTOR_SHOW_WARNINGS = _IMP_score_functor.IMPSCOREFUNCTOR_SHOW_WARNINGS
411 class Score(object):
412  """Proxy of C++ IMP::score_functor::Score class"""
413  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
414  __repr__ = _swig_repr
415 
416  def __init__(self):
417  """__init__(IMP::score_functor::Score self) -> Score"""
418  this = _IMP_score_functor.new_Score()
419  try:
420  self.this.append(this)
421  except:
422  self.this = this
423 
424  def get_inputs(self, m, pis):
425  """get_inputs(Score self, Model m, IMP::ParticleIndexes const & pis) -> IMP::ModelObjectsTemp"""
426  return _IMP_score_functor.Score_get_inputs(self, m, pis)
427 
428 
429  def show(self, arg2):
430  """show(Score self, _ostream arg2)"""
431  return _IMP_score_functor.Score_show(self, arg2)
432 
433  __swig_destroy__ = _IMP_score_functor.delete_Score
434  __del__ = lambda self: None
435 Score_swigregister = _IMP_score_functor.Score_swigregister
436 Score_swigregister(Score)
437 
438 class _DopeBase(Score):
439  """Proxy of C++ IMP::score_functor::Statistical<(IMP::score_functor::DopeType,false,true)> class"""
440  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
441  __repr__ = _swig_repr
442 
443  def __init__(self, *args):
444  """
445  __init__(IMP::score_functor::Statistical<(IMP::score_functor::DopeType,false,true)> self, IntKey k, double threshold, TextInput data_file) -> _DopeBase
446  __init__(IMP::score_functor::Statistical<(IMP::score_functor::DopeType,false,true)> self, IntKey k, double threshold, TextInput data_file, unsigned int shift) -> _DopeBase
447  """
448  this = _IMP_score_functor.new__DopeBase(*args)
449  try:
450  self.this.append(this)
451  except:
452  self.this = this
453 
454  def get_score(self, m, pp, distance):
455  """get_score(_DopeBase self, Model m, IMP::ParticleIndexPair const & pp, double distance) -> double"""
456  return _IMP_score_functor._DopeBase_get_score(self, m, pp, distance)
457 
458 
459  def get_score_and_derivative(self, m, pp, distance):
460  """get_score_and_derivative(_DopeBase self, Model m, IMP::Array< 2,IMP::ParticleIndex > const & pp, double distance) -> IMP::DerivativePair"""
461  return _IMP_score_functor._DopeBase_get_score_and_derivative(self, m, pp, distance)
462 
463 
464  def get_maximum_range(self, arg2, arg3):
465  """get_maximum_range(_DopeBase self, Model arg2, IMP::ParticleIndexPair const & arg3) -> double"""
466  return _IMP_score_functor._DopeBase_get_maximum_range(self, arg2, arg3)
467 
468 
469  def get_is_trivially_zero(self, m, p, squared_distance):
470  """get_is_trivially_zero(_DopeBase self, Model m, IMP::ParticleIndexPair const & p, double squared_distance) -> bool"""
471  return _IMP_score_functor._DopeBase_get_is_trivially_zero(self, m, p, squared_distance)
472 
473  __swig_destroy__ = _IMP_score_functor.delete__DopeBase
474  __del__ = lambda self: None
475 _DopeBase_swigregister = _IMP_score_functor._DopeBase_swigregister
476 _DopeBase_swigregister(_DopeBase)
477 
478 class _LoopStatisticalBase(Score):
479  """Proxy of C++ IMP::score_functor::Statistical<(IMP::score_functor::LoopStatisticalType,false,true)> class"""
480  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
481  __repr__ = _swig_repr
482 
483  def __init__(self, *args):
484  """
485  __init__(IMP::score_functor::Statistical<(IMP::score_functor::LoopStatisticalType,false,true)> self, IntKey k, double threshold, TextInput data_file) -> _LoopStatisticalBase
486  __init__(IMP::score_functor::Statistical<(IMP::score_functor::LoopStatisticalType,false,true)> self, IntKey k, double threshold, TextInput data_file, unsigned int shift) -> _LoopStatisticalBase
487  """
488  this = _IMP_score_functor.new__LoopStatisticalBase(*args)
489  try:
490  self.this.append(this)
491  except:
492  self.this = this
493 
494  def get_score(self, m, pp, distance):
495  """get_score(_LoopStatisticalBase self, Model m, IMP::ParticleIndexPair const & pp, double distance) -> double"""
496  return _IMP_score_functor._LoopStatisticalBase_get_score(self, m, pp, distance)
497 
498 
499  def get_score_and_derivative(self, m, pp, distance):
500  """get_score_and_derivative(_LoopStatisticalBase self, Model m, IMP::Array< 2,IMP::ParticleIndex > const & pp, double distance) -> IMP::DerivativePair"""
501  return _IMP_score_functor._LoopStatisticalBase_get_score_and_derivative(self, m, pp, distance)
502 
503 
504  def get_maximum_range(self, arg2, arg3):
505  """get_maximum_range(_LoopStatisticalBase self, Model arg2, IMP::ParticleIndexPair const & arg3) -> double"""
506  return _IMP_score_functor._LoopStatisticalBase_get_maximum_range(self, arg2, arg3)
507 
508 
509  def get_is_trivially_zero(self, m, p, squared_distance):
510  """get_is_trivially_zero(_LoopStatisticalBase self, Model m, IMP::ParticleIndexPair const & p, double squared_distance) -> bool"""
511  return _IMP_score_functor._LoopStatisticalBase_get_is_trivially_zero(self, m, p, squared_distance)
512 
513  __swig_destroy__ = _IMP_score_functor.delete__LoopStatisticalBase
514  __del__ = lambda self: None
515 _LoopStatisticalBase_swigregister = _IMP_score_functor._LoopStatisticalBase_swigregister
516 _LoopStatisticalBase_swigregister(_LoopStatisticalBase)
517 
518 class Dope(_DopeBase):
519  """Proxy of C++ IMP::score_functor::Dope class"""
520  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
521  __repr__ = _swig_repr
522 
523  def __init__(self, *args):
524  """
525  __init__(IMP::score_functor::Dope self, double threshold) -> Dope
526  __init__(IMP::score_functor::Dope self) -> Dope
527  __init__(IMP::score_functor::Dope self, double threshold, TextInput data_file) -> Dope
528  """
529  this = _IMP_score_functor.new_Dope(*args)
530  try:
531  self.this.append(this)
532  except:
533  self.this = this
534 
535  def get_dope_type_key():
536  """get_dope_type_key() -> IntKey"""
537  return _IMP_score_functor.Dope_get_dope_type_key()
538 
539  get_dope_type_key = staticmethod(get_dope_type_key)
540  __swig_destroy__ = _IMP_score_functor.delete_Dope
541  __del__ = lambda self: None
542 Dope_swigregister = _IMP_score_functor.Dope_swigregister
543 Dope_swigregister(Dope)
544 
545 def Dope_get_dope_type_key():
546  """Dope_get_dope_type_key() -> IntKey"""
547  return _IMP_score_functor.Dope_get_dope_type_key()
548 
549 class LoopStatistical(_LoopStatisticalBase):
550  """Proxy of C++ IMP::score_functor::LoopStatistical class"""
551  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
552  __repr__ = _swig_repr
553 
554  def __init__(self, *args):
555  """
556  __init__(IMP::score_functor::LoopStatistical self, double threshold) -> LoopStatistical
557  __init__(IMP::score_functor::LoopStatistical self) -> LoopStatistical
558  __init__(IMP::score_functor::LoopStatistical self, double threshold, TextInput data_file) -> LoopStatistical
559  """
560  this = _IMP_score_functor.new_LoopStatistical(*args)
561  try:
562  self.this.append(this)
563  except:
564  self.this = this
565 
566  def get_loop_type_key():
567  """get_loop_type_key() -> IntKey"""
568  return _IMP_score_functor.LoopStatistical_get_loop_type_key()
569 
570  get_loop_type_key = staticmethod(get_loop_type_key)
571  __swig_destroy__ = _IMP_score_functor.delete_LoopStatistical
572  __del__ = lambda self: None
573 LoopStatistical_swigregister = _IMP_score_functor.LoopStatistical_swigregister
574 LoopStatistical_swigregister(LoopStatistical)
575 
576 def LoopStatistical_get_loop_type_key():
577  """LoopStatistical_get_loop_type_key() -> IntKey"""
578  return _IMP_score_functor.LoopStatistical_get_loop_type_key()
579 
580 class UnaryFunctionEvaluate(Score):
581  """Proxy of C++ IMP::score_functor::UnaryFunctionEvaluate class"""
582  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
583  __repr__ = _swig_repr
584 
585  def __init__(self, uf):
586  """__init__(IMP::score_functor::UnaryFunctionEvaluate self, UnaryFunction uf) -> UnaryFunctionEvaluate"""
587  this = _IMP_score_functor.new_UnaryFunctionEvaluate(uf)
588  try:
589  self.this.append(this)
590  except:
591  self.this = this
592  __swig_destroy__ = _IMP_score_functor.delete_UnaryFunctionEvaluate
593  __del__ = lambda self: None
594 UnaryFunctionEvaluate_swigregister = _IMP_score_functor.UnaryFunctionEvaluate_swigregister
595 UnaryFunctionEvaluate_swigregister(UnaryFunctionEvaluate)
596 
597 
598 def get_module_version():
599  """get_module_version() -> std::string const"""
600  return _IMP_score_functor.get_module_version()
601 
602 def get_example_path(fname):
603  """get_example_path(std::string fname) -> std::string"""
604  return _IMP_score_functor.get_example_path(fname)
605 
606 def get_data_path(fname):
607  """get_data_path(std::string fname) -> std::string"""
608  return _IMP_score_functor.get_data_path(fname)
609 
610 from . import _version_check
611 _version_check.check_version(get_module_version())
612 __version__ = get_module_version()
613 
614 
615 
def get_data_path
Return the full path to one of this module's data files.
def get_module_version
Return the version of this module, as a string.
def get_example_path
Return the full path to one of this module's example files.
Make CGAL functionality available to IMP.
std::ostream & show(Hierarchy h, std::ostream &out=std::cout)
Print the hierarchy using a given decorator to display each node.
General purpose algebraic and geometric methods that are expected to be used by a wide variety of IMP...