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IMP Reference Guide  2.15.0
The Integrative Modeling Platform
version 2.15.0
cnmultifit/__init__.py
1 # This file was automatically generated by SWIG (http://www.swig.org).
2 # Version 3.0.7
3 #
4 # Do not make changes to this file unless you know what you are doing--modify
5 # the SWIG interface file instead.
6 
7 # This wrapper is part of IMP,
8 # Copyright 2007-2021 IMP Inventors. All rights reserved.
9 
10 from __future__ import print_function, division, absolute_import
11 
12 
13 
14 
15 from sys import version_info
16 if version_info >= (2, 6, 0):
17  def swig_import_helper():
18  from os.path import dirname
19  import imp
20  fp = None
21  try:
22  fp, pathname, description = imp.find_module('_IMP_cnmultifit', [dirname(__file__)])
23  except ImportError:
24  import _IMP_cnmultifit
25  return _IMP_cnmultifit
26  if fp is not None:
27  try:
28  _mod = imp.load_module('_IMP_cnmultifit', fp, pathname, description)
29  finally:
30  fp.close()
31  return _mod
32  _IMP_cnmultifit = swig_import_helper()
33  del swig_import_helper
34 else:
35  import _IMP_cnmultifit
36 del version_info
37 try:
38  _swig_property = property
39 except NameError:
40  pass # Python < 2.2 doesn't have 'property'.
41 
42 
43 def _swig_setattr_nondynamic(self, class_type, name, value, static=1):
44  if (name == "thisown"):
45  return self.this.own(value)
46  if (name == "this"):
47  if type(value).__name__ == 'SwigPyObject':
48  self.__dict__[name] = value
49  return
50  method = class_type.__swig_setmethods__.get(name, None)
51  if method:
52  return method(self, value)
53  if (not static):
54  object.__setattr__(self, name, value)
55  else:
56  raise AttributeError("You cannot add attributes to %s" % self)
57 
58 
59 def _swig_setattr(self, class_type, name, value):
60  return _swig_setattr_nondynamic(self, class_type, name, value, 0)
61 
62 
63 def _swig_getattr_nondynamic(self, class_type, name, static=1):
64  if (name == "thisown"):
65  return self.this.own()
66  method = class_type.__swig_getmethods__.get(name, None)
67  if method:
68  return method(self)
69  if (not static):
70  return object.__getattr__(self, name)
71  else:
72  raise AttributeError(name)
73 
74 def _swig_getattr(self, class_type, name):
75  return _swig_getattr_nondynamic(self, class_type, name, 0)
76 
77 
78 def _swig_repr(self):
79  try:
80  strthis = "proxy of " + self.this.__repr__()
81  except:
82  strthis = ""
83  return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
84 
85 try:
86  _object = object
87  _newclass = 1
88 except AttributeError:
89  class _object:
90  pass
91  _newclass = 0
92 
93 
94 
95 def _swig_setattr_nondynamic_method(set):
96  def set_attr(self, name, value):
97  if (name == "thisown"):
98  return self.this.own(value)
99  if hasattr(self, name) or (name == "this"):
100  set(self, name, value)
101  else:
102  raise AttributeError("You cannot add attributes to %s" % self)
103  return set_attr
104 
105 
106 try:
107  import weakref
108  weakref_proxy = weakref.proxy
109 except:
110  weakref_proxy = lambda x: x
111 
112 
113 class IMP_CNMULTIFIT_SwigPyIterator(object):
114  """Proxy of C++ swig::IMP_CNMULTIFIT_SwigPyIterator class"""
115  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
116 
117  def __init__(self, *args, **kwargs):
118  raise AttributeError("No constructor defined - class is abstract")
119  __repr__ = _swig_repr
120  __swig_destroy__ = _IMP_cnmultifit.delete_IMP_CNMULTIFIT_SwigPyIterator
121  __del__ = lambda self: None
122 
123  def value(self):
124  """value(IMP_CNMULTIFIT_SwigPyIterator self) -> PyObject *"""
125  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_value(self)
126 
127 
128  def incr(self, n=1):
129  """
130  incr(IMP_CNMULTIFIT_SwigPyIterator self, size_t n=1) -> IMP_CNMULTIFIT_SwigPyIterator
131  incr(IMP_CNMULTIFIT_SwigPyIterator self) -> IMP_CNMULTIFIT_SwigPyIterator
132  """
133  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_incr(self, n)
134 
135 
136  def decr(self, n=1):
137  """
138  decr(IMP_CNMULTIFIT_SwigPyIterator self, size_t n=1) -> IMP_CNMULTIFIT_SwigPyIterator
139  decr(IMP_CNMULTIFIT_SwigPyIterator self) -> IMP_CNMULTIFIT_SwigPyIterator
140  """
141  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_decr(self, n)
142 
143 
144  def distance(self, x):
145  """distance(IMP_CNMULTIFIT_SwigPyIterator self, IMP_CNMULTIFIT_SwigPyIterator x) -> ptrdiff_t"""
146  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_distance(self, x)
147 
148 
149  def equal(self, x):
150  """equal(IMP_CNMULTIFIT_SwigPyIterator self, IMP_CNMULTIFIT_SwigPyIterator x) -> bool"""
151  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_equal(self, x)
152 
153 
154  def copy(self):
155  """copy(IMP_CNMULTIFIT_SwigPyIterator self) -> IMP_CNMULTIFIT_SwigPyIterator"""
156  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_copy(self)
157 
158 
159  def next(self):
160  """next(IMP_CNMULTIFIT_SwigPyIterator self) -> PyObject *"""
161  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_next(self)
162 
163 
164  def __next__(self):
165  """__next__(IMP_CNMULTIFIT_SwigPyIterator self) -> PyObject *"""
166  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator___next__(self)
167 
168 
169  def previous(self):
170  """previous(IMP_CNMULTIFIT_SwigPyIterator self) -> PyObject *"""
171  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_previous(self)
172 
173 
174  def advance(self, n):
175  """advance(IMP_CNMULTIFIT_SwigPyIterator self, ptrdiff_t n) -> IMP_CNMULTIFIT_SwigPyIterator"""
176  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_advance(self, n)
177 
178 
179  def __eq__(self, x):
180  """__eq__(IMP_CNMULTIFIT_SwigPyIterator self, IMP_CNMULTIFIT_SwigPyIterator x) -> bool"""
181  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator___eq__(self, x)
182 
183 
184  def __ne__(self, x):
185  """__ne__(IMP_CNMULTIFIT_SwigPyIterator self, IMP_CNMULTIFIT_SwigPyIterator x) -> bool"""
186  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator___ne__(self, x)
187 
188 
189  def __iadd__(self, n):
190  """__iadd__(IMP_CNMULTIFIT_SwigPyIterator self, ptrdiff_t n) -> IMP_CNMULTIFIT_SwigPyIterator"""
191  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator___iadd__(self, n)
192 
193 
194  def __isub__(self, n):
195  """__isub__(IMP_CNMULTIFIT_SwigPyIterator self, ptrdiff_t n) -> IMP_CNMULTIFIT_SwigPyIterator"""
196  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator___isub__(self, n)
197 
198 
199  def __add__(self, n):
200  """__add__(IMP_CNMULTIFIT_SwigPyIterator self, ptrdiff_t n) -> IMP_CNMULTIFIT_SwigPyIterator"""
201  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator___add__(self, n)
202 
203 
204  def __sub__(self, *args):
205  """
206  __sub__(IMP_CNMULTIFIT_SwigPyIterator self, ptrdiff_t n) -> IMP_CNMULTIFIT_SwigPyIterator
207  __sub__(IMP_CNMULTIFIT_SwigPyIterator self, IMP_CNMULTIFIT_SwigPyIterator x) -> ptrdiff_t
208  """
209  return _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator___sub__(self, *args)
210 
211  def __iter__(self):
212  return self
213 IMP_CNMULTIFIT_SwigPyIterator_swigregister = _IMP_cnmultifit.IMP_CNMULTIFIT_SwigPyIterator_swigregister
214 IMP_CNMULTIFIT_SwigPyIterator_swigregister(IMP_CNMULTIFIT_SwigPyIterator)
215 
216 
217 _value_types=[]
218 _object_types=[]
219 _raii_types=[]
220 _plural_types=[]
221 
222 
223 _IMP_cnmultifit.IMP_DEBUG_swigconstant(_IMP_cnmultifit)
224 IMP_DEBUG = _IMP_cnmultifit.IMP_DEBUG
225 
226 _IMP_cnmultifit.IMP_RELEASE_swigconstant(_IMP_cnmultifit)
227 IMP_RELEASE = _IMP_cnmultifit.IMP_RELEASE
228 
229 _IMP_cnmultifit.IMP_SILENT_swigconstant(_IMP_cnmultifit)
230 IMP_SILENT = _IMP_cnmultifit.IMP_SILENT
231 
232 _IMP_cnmultifit.IMP_PROGRESS_swigconstant(_IMP_cnmultifit)
233 IMP_PROGRESS = _IMP_cnmultifit.IMP_PROGRESS
234 
235 _IMP_cnmultifit.IMP_TERSE_swigconstant(_IMP_cnmultifit)
236 IMP_TERSE = _IMP_cnmultifit.IMP_TERSE
237 
238 _IMP_cnmultifit.IMP_VERBOSE_swigconstant(_IMP_cnmultifit)
239 IMP_VERBOSE = _IMP_cnmultifit.IMP_VERBOSE
240 
241 _IMP_cnmultifit.IMP_MEMORY_swigconstant(_IMP_cnmultifit)
242 IMP_MEMORY = _IMP_cnmultifit.IMP_MEMORY
243 
244 _IMP_cnmultifit.IMP_NONE_swigconstant(_IMP_cnmultifit)
245 IMP_NONE = _IMP_cnmultifit.IMP_NONE
246 
247 _IMP_cnmultifit.IMP_USAGE_swigconstant(_IMP_cnmultifit)
248 IMP_USAGE = _IMP_cnmultifit.IMP_USAGE
249 
250 _IMP_cnmultifit.IMP_INTERNAL_swigconstant(_IMP_cnmultifit)
251 IMP_INTERNAL = _IMP_cnmultifit.IMP_INTERNAL
252 
253 _IMP_cnmultifit.IMP_KERNEL_HAS_LOG4CXX_swigconstant(_IMP_cnmultifit)
254 IMP_KERNEL_HAS_LOG4CXX = _IMP_cnmultifit.IMP_KERNEL_HAS_LOG4CXX
255 
256 _IMP_cnmultifit.IMP_COMPILER_HAS_AUTO_swigconstant(_IMP_cnmultifit)
257 IMP_COMPILER_HAS_AUTO = _IMP_cnmultifit.IMP_COMPILER_HAS_AUTO
258 
259 _IMP_cnmultifit.IMP_COMPILER_HAS_DEBUG_VECTOR_swigconstant(_IMP_cnmultifit)
260 IMP_COMPILER_HAS_DEBUG_VECTOR = _IMP_cnmultifit.IMP_COMPILER_HAS_DEBUG_VECTOR
261 
262 _IMP_cnmultifit.IMP_COMPILER_HAS_UNIQUE_PTR_swigconstant(_IMP_cnmultifit)
263 IMP_COMPILER_HAS_UNIQUE_PTR = _IMP_cnmultifit.IMP_COMPILER_HAS_UNIQUE_PTR
264 
265 _IMP_cnmultifit.IMP_KERNEL_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
266 IMP_KERNEL_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_KERNEL_HAS_BOOST_RANDOM
267 
268 _IMP_cnmultifit.IMP_KERNEL_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
269 IMP_KERNEL_HAS_NUMPY = _IMP_cnmultifit.IMP_KERNEL_HAS_NUMPY
270 
271 _IMP_cnmultifit.IMP_KERNEL_HAS_GPERFTOOLS_swigconstant(_IMP_cnmultifit)
272 IMP_KERNEL_HAS_GPERFTOOLS = _IMP_cnmultifit.IMP_KERNEL_HAS_GPERFTOOLS
273 
274 _IMP_cnmultifit.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER_swigconstant(_IMP_cnmultifit)
275 IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER = _IMP_cnmultifit.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER
276 
277 _IMP_cnmultifit.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER_swigconstant(_IMP_cnmultifit)
278 IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER = _IMP_cnmultifit.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER
279 
280 _IMP_cnmultifit.IMPKERNEL_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
281 IMPKERNEL_SHOW_WARNINGS = _IMP_cnmultifit.IMPKERNEL_SHOW_WARNINGS
282 
283 import sys
284 class _DirectorObjects(object):
285  """@internal Simple class to keep references to director objects
286  to prevent premature deletion."""
287  def __init__(self):
288  self._objects = []
289  def register(self, obj):
290  """Take a reference to a director object; will only work for
291  refcounted C++ classes"""
292  if hasattr(obj, 'get_ref_count'):
293  self._objects.append(obj)
294  def cleanup(self):
295  """Only drop our reference and allow cleanup by Python if no other
296  Python references exist (we hold 3 references: one in self._objects,
297  one in x, and one in the argument list for getrefcount) *and* no
298  other C++ references exist (the Python object always holds one)"""
299  objs = [x for x in self._objects if sys.getrefcount(x) > 3 \
300  or x.get_ref_count() > 1]
301 # Do in two steps so the references are kept until the end of the
302 # function (deleting references may trigger a fresh call to this method)
303  self._objects = objs
304  def get_object_count(self):
305  """Get number of director objects (useful for testing only)"""
306  return len(self._objects)
307 _director_objects = _DirectorObjects()
308 
309 class _ostream(object):
310  """Proxy of C++ std::ostream class"""
311  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
312 
313  def __init__(self, *args, **kwargs):
314  raise AttributeError("No constructor defined")
315  __repr__ = _swig_repr
316 
317  def write(self, osa_buf):
318  """write(_ostream self, char const * osa_buf)"""
319  return _IMP_cnmultifit._ostream_write(self, osa_buf)
320 
321 _ostream_swigregister = _IMP_cnmultifit._ostream_swigregister
322 _ostream_swigregister(_ostream)
323 
324 
325 _IMP_cnmultifit.IMP_COMPILER_HAS_OVERRIDE_swigconstant(_IMP_cnmultifit)
326 IMP_COMPILER_HAS_OVERRIDE = _IMP_cnmultifit.IMP_COMPILER_HAS_OVERRIDE
327 
328 _IMP_cnmultifit.IMP_COMPILER_HAS_FINAL_swigconstant(_IMP_cnmultifit)
329 IMP_COMPILER_HAS_FINAL = _IMP_cnmultifit.IMP_COMPILER_HAS_FINAL
330 
331 _IMP_cnmultifit.IMP_HAS_NOEXCEPT_swigconstant(_IMP_cnmultifit)
332 IMP_HAS_NOEXCEPT = _IMP_cnmultifit.IMP_HAS_NOEXCEPT
333 
334 _IMP_cnmultifit.IMP_C_OPEN_BINARY_swigconstant(_IMP_cnmultifit)
335 IMP_C_OPEN_BINARY = _IMP_cnmultifit.IMP_C_OPEN_BINARY
336 import IMP
337 
338 _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
339 IMP_CGAL_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_FILESYSTEM
340 
341 _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
342 IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS
343 
344 _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
345 IMP_CGAL_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_RANDOM
346 
347 _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
348 IMP_CGAL_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_CGAL_HAS_BOOST_SYSTEM
349 
350 _IMP_cnmultifit.IMP_CGAL_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
351 IMP_CGAL_HAS_NUMPY = _IMP_cnmultifit.IMP_CGAL_HAS_NUMPY
352 
353 _IMP_cnmultifit.IMPCGAL_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
354 IMPCGAL_SHOW_WARNINGS = _IMP_cnmultifit.IMPCGAL_SHOW_WARNINGS
355 import IMP.cgal
356 
357 _IMP_cnmultifit.IMP_ALGEBRA_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
358 IMP_ALGEBRA_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_ALGEBRA_HAS_IMP_CGAL
359 
360 _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
361 IMP_ALGEBRA_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM
362 
363 _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
364 IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS
365 
366 _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
367 IMP_ALGEBRA_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_RANDOM
368 
369 _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
370 IMP_ALGEBRA_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_ALGEBRA_HAS_BOOST_SYSTEM
371 
372 _IMP_cnmultifit.IMP_ALGEBRA_HAS_CGAL_swigconstant(_IMP_cnmultifit)
373 IMP_ALGEBRA_HAS_CGAL = _IMP_cnmultifit.IMP_ALGEBRA_HAS_CGAL
374 
375 _IMP_cnmultifit.IMP_ALGEBRA_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
376 IMP_ALGEBRA_HAS_NUMPY = _IMP_cnmultifit.IMP_ALGEBRA_HAS_NUMPY
377 
378 _IMP_cnmultifit.IMP_ALGEBRA_HAS_ANN_swigconstant(_IMP_cnmultifit)
379 IMP_ALGEBRA_HAS_ANN = _IMP_cnmultifit.IMP_ALGEBRA_HAS_ANN
380 
381 _IMP_cnmultifit.IMPALGEBRA_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
382 IMPALGEBRA_SHOW_WARNINGS = _IMP_cnmultifit.IMPALGEBRA_SHOW_WARNINGS
383 import IMP.algebra
384 
385 _IMP_cnmultifit.IMP_DISPLAY_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
386 IMP_DISPLAY_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_DISPLAY_HAS_IMP_CGAL
387 
388 _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
389 IMP_DISPLAY_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_FILESYSTEM
390 
391 _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
392 IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS
393 
394 _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
395 IMP_DISPLAY_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_RANDOM
396 
397 _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
398 IMP_DISPLAY_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_DISPLAY_HAS_BOOST_SYSTEM
399 
400 _IMP_cnmultifit.IMP_DISPLAY_HAS_CGAL_swigconstant(_IMP_cnmultifit)
401 IMP_DISPLAY_HAS_CGAL = _IMP_cnmultifit.IMP_DISPLAY_HAS_CGAL
402 
403 _IMP_cnmultifit.IMP_DISPLAY_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
404 IMP_DISPLAY_HAS_NUMPY = _IMP_cnmultifit.IMP_DISPLAY_HAS_NUMPY
405 
406 _IMP_cnmultifit.IMPDISPLAY_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
407 IMPDISPLAY_SHOW_WARNINGS = _IMP_cnmultifit.IMPDISPLAY_SHOW_WARNINGS
408 import IMP.display
409 
410 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
411 IMP_SCORE_FUNCTOR_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL
412 
413 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
414 IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM
415 
416 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
417 IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS
418 
419 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
420 IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM
421 
422 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
423 IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM
424 
425 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_CGAL_swigconstant(_IMP_cnmultifit)
426 IMP_SCORE_FUNCTOR_HAS_CGAL = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_CGAL
427 
428 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_HDF5_swigconstant(_IMP_cnmultifit)
429 IMP_SCORE_FUNCTOR_HAS_HDF5 = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_HDF5
430 
431 _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
432 IMP_SCORE_FUNCTOR_HAS_NUMPY = _IMP_cnmultifit.IMP_SCORE_FUNCTOR_HAS_NUMPY
433 
434 _IMP_cnmultifit.IMPSCOREFUNCTOR_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
435 IMPSCOREFUNCTOR_SHOW_WARNINGS = _IMP_cnmultifit.IMPSCOREFUNCTOR_SHOW_WARNINGS
436 import IMP.score_functor
437 
438 _IMP_cnmultifit.IMP_STATISTICS_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
439 IMP_STATISTICS_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_STATISTICS_HAS_IMP_CGAL
440 
441 _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
442 IMP_STATISTICS_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_FILESYSTEM
443 
444 _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
445 IMP_STATISTICS_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_PROGRAMOPTIONS
446 
447 _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
448 IMP_STATISTICS_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_RANDOM
449 
450 _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
451 IMP_STATISTICS_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_STATISTICS_HAS_BOOST_SYSTEM
452 
453 _IMP_cnmultifit.IMP_STATISTICS_HAS_CGAL_swigconstant(_IMP_cnmultifit)
454 IMP_STATISTICS_HAS_CGAL = _IMP_cnmultifit.IMP_STATISTICS_HAS_CGAL
455 
456 _IMP_cnmultifit.IMP_STATISTICS_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
457 IMP_STATISTICS_HAS_NUMPY = _IMP_cnmultifit.IMP_STATISTICS_HAS_NUMPY
458 
459 _IMP_cnmultifit.IMPSTATISTICS_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
460 IMPSTATISTICS_SHOW_WARNINGS = _IMP_cnmultifit.IMPSTATISTICS_SHOW_WARNINGS
461 import IMP.statistics
462 
463 _IMP_cnmultifit.IMP_CORE_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
464 IMP_CORE_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_CORE_HAS_IMP_CGAL
465 
466 _IMP_cnmultifit.IMP_CORE_HAS_IMP_KERNEL_swigconstant(_IMP_cnmultifit)
467 IMP_CORE_HAS_IMP_KERNEL = _IMP_cnmultifit.IMP_CORE_HAS_IMP_KERNEL
468 
469 _IMP_cnmultifit.IMP_CORE_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
470 IMP_CORE_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_CORE_HAS_BOOST_FILESYSTEM
471 
472 _IMP_cnmultifit.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
473 IMP_CORE_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS
474 
475 _IMP_cnmultifit.IMP_CORE_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
476 IMP_CORE_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_CORE_HAS_BOOST_RANDOM
477 
478 _IMP_cnmultifit.IMP_CORE_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
479 IMP_CORE_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_CORE_HAS_BOOST_SYSTEM
480 
481 _IMP_cnmultifit.IMP_CORE_HAS_CGAL_swigconstant(_IMP_cnmultifit)
482 IMP_CORE_HAS_CGAL = _IMP_cnmultifit.IMP_CORE_HAS_CGAL
483 
484 _IMP_cnmultifit.IMP_CORE_HAS_HDF5_swigconstant(_IMP_cnmultifit)
485 IMP_CORE_HAS_HDF5 = _IMP_cnmultifit.IMP_CORE_HAS_HDF5
486 
487 _IMP_cnmultifit.IMP_CORE_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
488 IMP_CORE_HAS_NUMPY = _IMP_cnmultifit.IMP_CORE_HAS_NUMPY
489 
490 _IMP_cnmultifit.IMPCORE_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
491 IMPCORE_SHOW_WARNINGS = _IMP_cnmultifit.IMPCORE_SHOW_WARNINGS
492 import IMP.core
493 
494 _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_ALGEBRA_swigconstant(_IMP_cnmultifit)
495 IMP_CONTAINER_HAS_IMP_ALGEBRA = _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_ALGEBRA
496 
497 _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
498 IMP_CONTAINER_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_CGAL
499 
500 _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_DISPLAY_swigconstant(_IMP_cnmultifit)
501 IMP_CONTAINER_HAS_IMP_DISPLAY = _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_DISPLAY
502 
503 _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_KERNEL_swigconstant(_IMP_cnmultifit)
504 IMP_CONTAINER_HAS_IMP_KERNEL = _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_KERNEL
505 
506 _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
507 IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR
508 
509 _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
510 IMP_CONTAINER_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_FILESYSTEM
511 
512 _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
513 IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS
514 
515 _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
516 IMP_CONTAINER_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_RANDOM
517 
518 _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
519 IMP_CONTAINER_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_CONTAINER_HAS_BOOST_SYSTEM
520 
521 _IMP_cnmultifit.IMP_CONTAINER_HAS_CGAL_swigconstant(_IMP_cnmultifit)
522 IMP_CONTAINER_HAS_CGAL = _IMP_cnmultifit.IMP_CONTAINER_HAS_CGAL
523 
524 _IMP_cnmultifit.IMP_CONTAINER_HAS_HDF5_swigconstant(_IMP_cnmultifit)
525 IMP_CONTAINER_HAS_HDF5 = _IMP_cnmultifit.IMP_CONTAINER_HAS_HDF5
526 
527 _IMP_cnmultifit.IMP_CONTAINER_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
528 IMP_CONTAINER_HAS_NUMPY = _IMP_cnmultifit.IMP_CONTAINER_HAS_NUMPY
529 
530 _IMP_cnmultifit.IMP_CONTAINER_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
531 IMP_CONTAINER_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_CONTAINER_HAS_PYTHON_IHM
532 
533 _IMP_cnmultifit.IMP_CONTAINER_HAS_GOOGLE_DENSE_HASH_MAP_swigconstant(_IMP_cnmultifit)
534 IMP_CONTAINER_HAS_GOOGLE_DENSE_HASH_MAP = _IMP_cnmultifit.IMP_CONTAINER_HAS_GOOGLE_DENSE_HASH_MAP
535 
536 _IMP_cnmultifit.IMP_CONTAINER_HAS_ROBIN_MAP_swigconstant(_IMP_cnmultifit)
537 IMP_CONTAINER_HAS_ROBIN_MAP = _IMP_cnmultifit.IMP_CONTAINER_HAS_ROBIN_MAP
538 
539 _IMP_cnmultifit.IMPCONTAINER_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
540 IMPCONTAINER_SHOW_WARNINGS = _IMP_cnmultifit.IMPCONTAINER_SHOW_WARNINGS
541 import IMP.container
542 
543 _IMP_cnmultifit.IMP_ATOM_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
544 IMP_ATOM_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_ATOM_HAS_IMP_CGAL
545 
546 _IMP_cnmultifit.IMP_ATOM_HAS_IMP_KERNEL_swigconstant(_IMP_cnmultifit)
547 IMP_ATOM_HAS_IMP_KERNEL = _IMP_cnmultifit.IMP_ATOM_HAS_IMP_KERNEL
548 
549 _IMP_cnmultifit.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
550 IMP_ATOM_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR
551 
552 _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
553 IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS
554 
555 _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
556 IMP_ATOM_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_RANDOM
557 
558 _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
559 IMP_ATOM_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_REGEX
560 
561 _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
562 IMP_ATOM_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_ATOM_HAS_BOOST_SYSTEM
563 
564 _IMP_cnmultifit.IMP_ATOM_HAS_CGAL_swigconstant(_IMP_cnmultifit)
565 IMP_ATOM_HAS_CGAL = _IMP_cnmultifit.IMP_ATOM_HAS_CGAL
566 
567 _IMP_cnmultifit.IMP_ATOM_HAS_HDF5_swigconstant(_IMP_cnmultifit)
568 IMP_ATOM_HAS_HDF5 = _IMP_cnmultifit.IMP_ATOM_HAS_HDF5
569 
570 _IMP_cnmultifit.IMP_ATOM_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
571 IMP_ATOM_HAS_NUMPY = _IMP_cnmultifit.IMP_ATOM_HAS_NUMPY
572 
573 _IMP_cnmultifit.IMP_ATOM_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
574 IMP_ATOM_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_ATOM_HAS_PYTHON_IHM
575 
576 _IMP_cnmultifit.IMPATOM_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
577 IMPATOM_SHOW_WARNINGS = _IMP_cnmultifit.IMPATOM_SHOW_WARNINGS
578 
579 _IMP_cnmultifit.IMP_ATOM_TYPE_INDEX_swigconstant(_IMP_cnmultifit)
580 IMP_ATOM_TYPE_INDEX = _IMP_cnmultifit.IMP_ATOM_TYPE_INDEX
581 
582 _IMP_cnmultifit.IMP_RESIDUE_TYPE_INDEX_swigconstant(_IMP_cnmultifit)
583 IMP_RESIDUE_TYPE_INDEX = _IMP_cnmultifit.IMP_RESIDUE_TYPE_INDEX
584 
585 _IMP_cnmultifit.IMP_HIERARCHY_TYPE_INDEX_swigconstant(_IMP_cnmultifit)
586 IMP_HIERARCHY_TYPE_INDEX = _IMP_cnmultifit.IMP_HIERARCHY_TYPE_INDEX
587 
588 _IMP_cnmultifit.IMP_CHAIN_TYPE_INDEX_swigconstant(_IMP_cnmultifit)
589 IMP_CHAIN_TYPE_INDEX = _IMP_cnmultifit.IMP_CHAIN_TYPE_INDEX
590 import IMP.atom
591 
592 _IMP_cnmultifit.IMP_EM_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
593 IMP_EM_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_EM_HAS_IMP_CGAL
594 
595 _IMP_cnmultifit.IMP_EM_HAS_IMP_CONTAINER_swigconstant(_IMP_cnmultifit)
596 IMP_EM_HAS_IMP_CONTAINER = _IMP_cnmultifit.IMP_EM_HAS_IMP_CONTAINER
597 
598 _IMP_cnmultifit.IMP_EM_HAS_IMP_DISPLAY_swigconstant(_IMP_cnmultifit)
599 IMP_EM_HAS_IMP_DISPLAY = _IMP_cnmultifit.IMP_EM_HAS_IMP_DISPLAY
600 
601 _IMP_cnmultifit.IMP_EM_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
602 IMP_EM_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_EM_HAS_IMP_SCORE_FUNCTOR
603 
604 _IMP_cnmultifit.IMP_EM_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
605 IMP_EM_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_EM_HAS_BOOST_FILESYSTEM
606 
607 _IMP_cnmultifit.IMP_EM_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
608 IMP_EM_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_EM_HAS_BOOST_PROGRAMOPTIONS
609 
610 _IMP_cnmultifit.IMP_EM_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
611 IMP_EM_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_EM_HAS_BOOST_RANDOM
612 
613 _IMP_cnmultifit.IMP_EM_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
614 IMP_EM_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_EM_HAS_BOOST_REGEX
615 
616 _IMP_cnmultifit.IMP_EM_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
617 IMP_EM_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_EM_HAS_BOOST_SYSTEM
618 
619 _IMP_cnmultifit.IMP_EM_HAS_CGAL_swigconstant(_IMP_cnmultifit)
620 IMP_EM_HAS_CGAL = _IMP_cnmultifit.IMP_EM_HAS_CGAL
621 
622 _IMP_cnmultifit.IMP_EM_HAS_HDF5_swigconstant(_IMP_cnmultifit)
623 IMP_EM_HAS_HDF5 = _IMP_cnmultifit.IMP_EM_HAS_HDF5
624 
625 _IMP_cnmultifit.IMP_EM_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
626 IMP_EM_HAS_NUMPY = _IMP_cnmultifit.IMP_EM_HAS_NUMPY
627 
628 _IMP_cnmultifit.IMP_EM_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
629 IMP_EM_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_EM_HAS_PYTHON_IHM
630 
631 _IMP_cnmultifit.IMPEM_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
632 IMPEM_SHOW_WARNINGS = _IMP_cnmultifit.IMPEM_SHOW_WARNINGS
633 import IMP.em
634 
635 _IMP_cnmultifit.IMP_SAXS_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
636 IMP_SAXS_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_SAXS_HAS_IMP_CGAL
637 
638 _IMP_cnmultifit.IMP_SAXS_HAS_IMP_CONTAINER_swigconstant(_IMP_cnmultifit)
639 IMP_SAXS_HAS_IMP_CONTAINER = _IMP_cnmultifit.IMP_SAXS_HAS_IMP_CONTAINER
640 
641 _IMP_cnmultifit.IMP_SAXS_HAS_IMP_DISPLAY_swigconstant(_IMP_cnmultifit)
642 IMP_SAXS_HAS_IMP_DISPLAY = _IMP_cnmultifit.IMP_SAXS_HAS_IMP_DISPLAY
643 
644 _IMP_cnmultifit.IMP_SAXS_HAS_IMP_KERNEL_swigconstant(_IMP_cnmultifit)
645 IMP_SAXS_HAS_IMP_KERNEL = _IMP_cnmultifit.IMP_SAXS_HAS_IMP_KERNEL
646 
647 _IMP_cnmultifit.IMP_SAXS_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
648 IMP_SAXS_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_SAXS_HAS_IMP_SCORE_FUNCTOR
649 
650 _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
651 IMP_SAXS_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_FILESYSTEM
652 
653 _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
654 IMP_SAXS_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_PROGRAMOPTIONS
655 
656 _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
657 IMP_SAXS_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_RANDOM
658 
659 _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
660 IMP_SAXS_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_REGEX
661 
662 _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
663 IMP_SAXS_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_SAXS_HAS_BOOST_SYSTEM
664 
665 _IMP_cnmultifit.IMP_SAXS_HAS_CGAL_swigconstant(_IMP_cnmultifit)
666 IMP_SAXS_HAS_CGAL = _IMP_cnmultifit.IMP_SAXS_HAS_CGAL
667 
668 _IMP_cnmultifit.IMP_SAXS_HAS_HDF5_swigconstant(_IMP_cnmultifit)
669 IMP_SAXS_HAS_HDF5 = _IMP_cnmultifit.IMP_SAXS_HAS_HDF5
670 
671 _IMP_cnmultifit.IMP_SAXS_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
672 IMP_SAXS_HAS_NUMPY = _IMP_cnmultifit.IMP_SAXS_HAS_NUMPY
673 
674 _IMP_cnmultifit.IMP_SAXS_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
675 IMP_SAXS_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_SAXS_HAS_PYTHON_IHM
676 
677 _IMP_cnmultifit.IMPSAXS_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
678 IMPSAXS_SHOW_WARNINGS = _IMP_cnmultifit.IMPSAXS_SHOW_WARNINGS
679 import IMP.saxs
680 
681 _IMP_cnmultifit.IMP_ISD_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
682 IMP_ISD_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_ISD_HAS_IMP_CGAL
683 
684 _IMP_cnmultifit.IMP_ISD_HAS_IMP_DISPLAY_swigconstant(_IMP_cnmultifit)
685 IMP_ISD_HAS_IMP_DISPLAY = _IMP_cnmultifit.IMP_ISD_HAS_IMP_DISPLAY
686 
687 _IMP_cnmultifit.IMP_ISD_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
688 IMP_ISD_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_ISD_HAS_IMP_SCORE_FUNCTOR
689 
690 _IMP_cnmultifit.IMP_ISD_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
691 IMP_ISD_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_ISD_HAS_BOOST_FILESYSTEM
692 
693 _IMP_cnmultifit.IMP_ISD_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
694 IMP_ISD_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_ISD_HAS_BOOST_PROGRAMOPTIONS
695 
696 _IMP_cnmultifit.IMP_ISD_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
697 IMP_ISD_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_ISD_HAS_BOOST_RANDOM
698 
699 _IMP_cnmultifit.IMP_ISD_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
700 IMP_ISD_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_ISD_HAS_BOOST_REGEX
701 
702 _IMP_cnmultifit.IMP_ISD_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
703 IMP_ISD_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_ISD_HAS_BOOST_SYSTEM
704 
705 _IMP_cnmultifit.IMP_ISD_HAS_CGAL_swigconstant(_IMP_cnmultifit)
706 IMP_ISD_HAS_CGAL = _IMP_cnmultifit.IMP_ISD_HAS_CGAL
707 
708 _IMP_cnmultifit.IMP_ISD_HAS_HDF5_swigconstant(_IMP_cnmultifit)
709 IMP_ISD_HAS_HDF5 = _IMP_cnmultifit.IMP_ISD_HAS_HDF5
710 
711 _IMP_cnmultifit.IMP_ISD_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
712 IMP_ISD_HAS_NUMPY = _IMP_cnmultifit.IMP_ISD_HAS_NUMPY
713 
714 _IMP_cnmultifit.IMP_ISD_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
715 IMP_ISD_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_ISD_HAS_PYTHON_IHM
716 
717 _IMP_cnmultifit.IMPISD_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
718 IMPISD_SHOW_WARNINGS = _IMP_cnmultifit.IMPISD_SHOW_WARNINGS
719 import IMP.isd
720 
721 _IMP_cnmultifit.IMP_RMF_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
722 IMP_RMF_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_RMF_HAS_IMP_CGAL
723 
724 _IMP_cnmultifit.IMP_RMF_HAS_IMP_EM_swigconstant(_IMP_cnmultifit)
725 IMP_RMF_HAS_IMP_EM = _IMP_cnmultifit.IMP_RMF_HAS_IMP_EM
726 
727 _IMP_cnmultifit.IMP_RMF_HAS_IMP_SAXS_swigconstant(_IMP_cnmultifit)
728 IMP_RMF_HAS_IMP_SAXS = _IMP_cnmultifit.IMP_RMF_HAS_IMP_SAXS
729 
730 _IMP_cnmultifit.IMP_RMF_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
731 IMP_RMF_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_RMF_HAS_IMP_SCORE_FUNCTOR
732 
733 _IMP_cnmultifit.IMP_RMF_HAS_IMP_STATISTICS_swigconstant(_IMP_cnmultifit)
734 IMP_RMF_HAS_IMP_STATISTICS = _IMP_cnmultifit.IMP_RMF_HAS_IMP_STATISTICS
735 
736 _IMP_cnmultifit.IMP_RMF_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
737 IMP_RMF_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_RMF_HAS_BOOST_FILESYSTEM
738 
739 _IMP_cnmultifit.IMP_RMF_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
740 IMP_RMF_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_RMF_HAS_BOOST_PROGRAMOPTIONS
741 
742 _IMP_cnmultifit.IMP_RMF_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
743 IMP_RMF_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_RMF_HAS_BOOST_RANDOM
744 
745 _IMP_cnmultifit.IMP_RMF_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
746 IMP_RMF_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_RMF_HAS_BOOST_REGEX
747 
748 _IMP_cnmultifit.IMP_RMF_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
749 IMP_RMF_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_RMF_HAS_BOOST_SYSTEM
750 
751 _IMP_cnmultifit.IMP_RMF_HAS_CGAL_swigconstant(_IMP_cnmultifit)
752 IMP_RMF_HAS_CGAL = _IMP_cnmultifit.IMP_RMF_HAS_CGAL
753 
754 _IMP_cnmultifit.IMP_RMF_HAS_HDF5_swigconstant(_IMP_cnmultifit)
755 IMP_RMF_HAS_HDF5 = _IMP_cnmultifit.IMP_RMF_HAS_HDF5
756 
757 _IMP_cnmultifit.IMP_RMF_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
758 IMP_RMF_HAS_NUMPY = _IMP_cnmultifit.IMP_RMF_HAS_NUMPY
759 
760 _IMP_cnmultifit.IMP_RMF_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
761 IMP_RMF_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_RMF_HAS_PYTHON_IHM
762 
763 _IMP_cnmultifit.IMPRMF_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
764 IMPRMF_SHOW_WARNINGS = _IMP_cnmultifit.IMPRMF_SHOW_WARNINGS
765 import IMP.rmf
766 import RMF
767 
768 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_ATOM_swigconstant(_IMP_cnmultifit)
769 IMP_DOMINO_HAS_IMP_ATOM = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_ATOM
770 
771 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
772 IMP_DOMINO_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_CGAL
773 
774 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_EM_swigconstant(_IMP_cnmultifit)
775 IMP_DOMINO_HAS_IMP_EM = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_EM
776 
777 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_ISD_swigconstant(_IMP_cnmultifit)
778 IMP_DOMINO_HAS_IMP_ISD = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_ISD
779 
780 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_KERNEL_swigconstant(_IMP_cnmultifit)
781 IMP_DOMINO_HAS_IMP_KERNEL = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_KERNEL
782 
783 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_RMF_swigconstant(_IMP_cnmultifit)
784 IMP_DOMINO_HAS_IMP_RMF = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_RMF
785 
786 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_SAXS_swigconstant(_IMP_cnmultifit)
787 IMP_DOMINO_HAS_IMP_SAXS = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_SAXS
788 
789 _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
790 IMP_DOMINO_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_DOMINO_HAS_IMP_SCORE_FUNCTOR
791 
792 _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_cnmultifit)
793 IMP_DOMINO_HAS_BOOST_FILESYSTEM = _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_FILESYSTEM
794 
795 _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_cnmultifit)
796 IMP_DOMINO_HAS_BOOST_PROGRAMOPTIONS = _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_PROGRAMOPTIONS
797 
798 _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
799 IMP_DOMINO_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_RANDOM
800 
801 _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
802 IMP_DOMINO_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_REGEX
803 
804 _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
805 IMP_DOMINO_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_DOMINO_HAS_BOOST_SYSTEM
806 
807 _IMP_cnmultifit.IMP_DOMINO_HAS_CGAL_swigconstant(_IMP_cnmultifit)
808 IMP_DOMINO_HAS_CGAL = _IMP_cnmultifit.IMP_DOMINO_HAS_CGAL
809 
810 _IMP_cnmultifit.IMP_DOMINO_HAS_HDF5_swigconstant(_IMP_cnmultifit)
811 IMP_DOMINO_HAS_HDF5 = _IMP_cnmultifit.IMP_DOMINO_HAS_HDF5
812 
813 _IMP_cnmultifit.IMP_DOMINO_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
814 IMP_DOMINO_HAS_NUMPY = _IMP_cnmultifit.IMP_DOMINO_HAS_NUMPY
815 
816 _IMP_cnmultifit.IMP_DOMINO_HAS_RMF_swigconstant(_IMP_cnmultifit)
817 IMP_DOMINO_HAS_RMF = _IMP_cnmultifit.IMP_DOMINO_HAS_RMF
818 
819 _IMP_cnmultifit.IMP_DOMINO_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
820 IMP_DOMINO_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_DOMINO_HAS_PYTHON_IHM
821 
822 _IMP_cnmultifit.IMPDOMINO_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
823 IMPDOMINO_SHOW_WARNINGS = _IMP_cnmultifit.IMPDOMINO_SHOW_WARNINGS
824 import RMF_HDF5
825 import IMP.domino
826 
827 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
828 IMP_MULTIFIT_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_CGAL
829 
830 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_CONTAINER_swigconstant(_IMP_cnmultifit)
831 IMP_MULTIFIT_HAS_IMP_CONTAINER = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_CONTAINER
832 
833 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_DISPLAY_swigconstant(_IMP_cnmultifit)
834 IMP_MULTIFIT_HAS_IMP_DISPLAY = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_DISPLAY
835 
836 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_ISD_swigconstant(_IMP_cnmultifit)
837 IMP_MULTIFIT_HAS_IMP_ISD = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_ISD
838 
839 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_KERNEL_swigconstant(_IMP_cnmultifit)
840 IMP_MULTIFIT_HAS_IMP_KERNEL = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_KERNEL
841 
842 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_RMF_swigconstant(_IMP_cnmultifit)
843 IMP_MULTIFIT_HAS_IMP_RMF = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_RMF
844 
845 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_SAXS_swigconstant(_IMP_cnmultifit)
846 IMP_MULTIFIT_HAS_IMP_SAXS = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_SAXS
847 
848 _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
849 IMP_MULTIFIT_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_MULTIFIT_HAS_IMP_SCORE_FUNCTOR
850 
851 _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_GRAPH_swigconstant(_IMP_cnmultifit)
852 IMP_MULTIFIT_HAS_BOOST_GRAPH = _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_GRAPH
853 
854 _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
855 IMP_MULTIFIT_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_RANDOM
856 
857 _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
858 IMP_MULTIFIT_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_REGEX
859 
860 _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
861 IMP_MULTIFIT_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_MULTIFIT_HAS_BOOST_SYSTEM
862 
863 _IMP_cnmultifit.IMP_MULTIFIT_HAS_CGAL_swigconstant(_IMP_cnmultifit)
864 IMP_MULTIFIT_HAS_CGAL = _IMP_cnmultifit.IMP_MULTIFIT_HAS_CGAL
865 
866 _IMP_cnmultifit.IMP_MULTIFIT_HAS_HDF5_swigconstant(_IMP_cnmultifit)
867 IMP_MULTIFIT_HAS_HDF5 = _IMP_cnmultifit.IMP_MULTIFIT_HAS_HDF5
868 
869 _IMP_cnmultifit.IMP_MULTIFIT_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
870 IMP_MULTIFIT_HAS_NUMPY = _IMP_cnmultifit.IMP_MULTIFIT_HAS_NUMPY
871 
872 _IMP_cnmultifit.IMP_MULTIFIT_HAS_RMF_swigconstant(_IMP_cnmultifit)
873 IMP_MULTIFIT_HAS_RMF = _IMP_cnmultifit.IMP_MULTIFIT_HAS_RMF
874 
875 _IMP_cnmultifit.IMP_MULTIFIT_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
876 IMP_MULTIFIT_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_MULTIFIT_HAS_PYTHON_IHM
877 
878 _IMP_cnmultifit.IMPMULTIFIT_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
879 IMPMULTIFIT_SHOW_WARNINGS = _IMP_cnmultifit.IMPMULTIFIT_SHOW_WARNINGS
880 import IMP.multifit
881 
882 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_CGAL_swigconstant(_IMP_cnmultifit)
883 IMP_CNMULTIFIT_HAS_IMP_CGAL = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_CGAL
884 
885 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_CONTAINER_swigconstant(_IMP_cnmultifit)
886 IMP_CNMULTIFIT_HAS_IMP_CONTAINER = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_CONTAINER
887 
888 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_DISPLAY_swigconstant(_IMP_cnmultifit)
889 IMP_CNMULTIFIT_HAS_IMP_DISPLAY = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_DISPLAY
890 
891 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_DOMINO_swigconstant(_IMP_cnmultifit)
892 IMP_CNMULTIFIT_HAS_IMP_DOMINO = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_DOMINO
893 
894 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_ISD_swigconstant(_IMP_cnmultifit)
895 IMP_CNMULTIFIT_HAS_IMP_ISD = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_ISD
896 
897 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_KERNEL_swigconstant(_IMP_cnmultifit)
898 IMP_CNMULTIFIT_HAS_IMP_KERNEL = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_KERNEL
899 
900 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_RMF_swigconstant(_IMP_cnmultifit)
901 IMP_CNMULTIFIT_HAS_IMP_RMF = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_RMF
902 
903 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_SAXS_swigconstant(_IMP_cnmultifit)
904 IMP_CNMULTIFIT_HAS_IMP_SAXS = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_SAXS
905 
906 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_cnmultifit)
907 IMP_CNMULTIFIT_HAS_IMP_SCORE_FUNCTOR = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_IMP_SCORE_FUNCTOR
908 
909 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_GRAPH_swigconstant(_IMP_cnmultifit)
910 IMP_CNMULTIFIT_HAS_BOOST_GRAPH = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_GRAPH
911 
912 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_RANDOM_swigconstant(_IMP_cnmultifit)
913 IMP_CNMULTIFIT_HAS_BOOST_RANDOM = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_RANDOM
914 
915 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_REGEX_swigconstant(_IMP_cnmultifit)
916 IMP_CNMULTIFIT_HAS_BOOST_REGEX = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_REGEX
917 
918 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_SYSTEM_swigconstant(_IMP_cnmultifit)
919 IMP_CNMULTIFIT_HAS_BOOST_SYSTEM = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_BOOST_SYSTEM
920 
921 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_CGAL_swigconstant(_IMP_cnmultifit)
922 IMP_CNMULTIFIT_HAS_CGAL = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_CGAL
923 
924 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_FFTW3_swigconstant(_IMP_cnmultifit)
925 IMP_CNMULTIFIT_HAS_FFTW3 = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_FFTW3
926 
927 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_HDF5_swigconstant(_IMP_cnmultifit)
928 IMP_CNMULTIFIT_HAS_HDF5 = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_HDF5
929 
930 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_NUMPY_swigconstant(_IMP_cnmultifit)
931 IMP_CNMULTIFIT_HAS_NUMPY = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_NUMPY
932 
933 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_RMF_swigconstant(_IMP_cnmultifit)
934 IMP_CNMULTIFIT_HAS_RMF = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_RMF
935 
936 _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_PYTHON_IHM_swigconstant(_IMP_cnmultifit)
937 IMP_CNMULTIFIT_HAS_PYTHON_IHM = _IMP_cnmultifit.IMP_CNMULTIFIT_HAS_PYTHON_IHM
938 
939 _IMP_cnmultifit.IMPCNMULTIFIT_SHOW_WARNINGS_swigconstant(_IMP_cnmultifit)
940 IMPCNMULTIFIT_SHOW_WARNINGS = _IMP_cnmultifit.IMPCNMULTIFIT_SHOW_WARNINGS
941 
942 AlignSymmetrics=list
943 _plural_types.append("AlignSymmetrics")
944 _value_types.append("AlignSymmetric")
945 
946 
947 CnSymmAxisDetectors=list
948 _plural_types.append("CnSymmAxisDetectors")
949 _value_types.append("CnSymmAxisDetector")
950 
951 
952 MolCnSymmAxisDetectors=list
953 _plural_types.append("MolCnSymmAxisDetectors")
954 _value_types.append("MolCnSymmAxisDetector")
955 
956 class CnSymmAxisDetector(object):
957  """Proxy of C++ IMP::cnmultifit::CnSymmAxisDetector class"""
958  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
959 
960  def __init__(self, *args):
961  """
962  __init__(IMP::cnmultifit::CnSymmAxisDetector self, int symm_deg, DensityMap dmap, float density_threshold, float top_p=0.8) -> CnSymmAxisDetector
963  __init__(IMP::cnmultifit::CnSymmAxisDetector self, int symm_deg, DensityMap dmap, float density_threshold) -> CnSymmAxisDetector
964  __init__(IMP::cnmultifit::CnSymmAxisDetector self, int symm_deg, IMP::atom::Hierarchies const & mhs) -> CnSymmAxisDetector
965  """
966  this = _IMP_cnmultifit.new_CnSymmAxisDetector(*args)
967  try:
968  self.this.append(this)
969  except:
970  self.this = this
971 
972  def get_pca(self):
973  """get_pca(CnSymmAxisDetector self) -> PrincipalComponentAnalysis3D"""
974  return _IMP_cnmultifit.CnSymmAxisDetector_get_pca(self)
975 
976 
977  def calc_symm_score(self, symm_axis_ind):
978  """calc_symm_score(CnSymmAxisDetector self, int symm_axis_ind) -> float"""
979  return _IMP_cnmultifit.CnSymmAxisDetector_calc_symm_score(self, symm_axis_ind)
980 
981 
982  def get_symmetry_axis(self):
983  """get_symmetry_axis(CnSymmAxisDetector self) -> Vector3D"""
984  return _IMP_cnmultifit.CnSymmAxisDetector_get_symmetry_axis(self)
985 
986 
987  def get_symmetry_axis_index(self):
988  """get_symmetry_axis_index(CnSymmAxisDetector self) -> int"""
989  return _IMP_cnmultifit.CnSymmAxisDetector_get_symmetry_axis_index(self)
990 
991 
992  def get_non_symmetry_axis_length(self):
993  """get_non_symmetry_axis_length(CnSymmAxisDetector self) -> int"""
994  return _IMP_cnmultifit.CnSymmAxisDetector_get_non_symmetry_axis_length(self)
995 
996 
997  def show(self, *args):
998  """
999  show(CnSymmAxisDetector self, _ostream out)
1000  show(CnSymmAxisDetector self)
1001  """
1002  return _IMP_cnmultifit.CnSymmAxisDetector_show(self, *args)
1003 
1004 
1005  def __str__(self):
1006  """__str__(CnSymmAxisDetector self) -> std::string"""
1007  return _IMP_cnmultifit.CnSymmAxisDetector___str__(self)
1008 
1009 
1010  def __repr__(self):
1011  """__repr__(CnSymmAxisDetector self) -> std::string"""
1012  return _IMP_cnmultifit.CnSymmAxisDetector___repr__(self)
1013 
1014  __swig_destroy__ = _IMP_cnmultifit.delete_CnSymmAxisDetector
1015  __del__ = lambda self: None
1016 CnSymmAxisDetector_swigregister = _IMP_cnmultifit.CnSymmAxisDetector_swigregister
1017 CnSymmAxisDetector_swigregister(CnSymmAxisDetector)
1018 
1019 class MolCnSymmAxisDetector(object):
1020  """Proxy of C++ IMP::cnmultifit::MolCnSymmAxisDetector class"""
1021  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
1022 
1023  def __init__(self, symm_deg, mhs):
1024  """__init__(IMP::cnmultifit::MolCnSymmAxisDetector self, int symm_deg, IMP::atom::Hierarchies const & mhs) -> MolCnSymmAxisDetector"""
1025  this = _IMP_cnmultifit.new_MolCnSymmAxisDetector(symm_deg, mhs)
1026  try:
1027  self.this.append(this)
1028  except:
1029  self.this = this
1030 
1031  def get_pca(self):
1032  """get_pca(MolCnSymmAxisDetector self) -> PrincipalComponentAnalysis3D"""
1033  return _IMP_cnmultifit.MolCnSymmAxisDetector_get_pca(self)
1034 
1035 
1036  def get_symmetry_axis(self):
1037  """get_symmetry_axis(MolCnSymmAxisDetector self) -> Vector3D"""
1038  return _IMP_cnmultifit.MolCnSymmAxisDetector_get_symmetry_axis(self)
1039 
1040 
1041  def get_symmetry_axis_index(self):
1042  """get_symmetry_axis_index(MolCnSymmAxisDetector self) -> int"""
1043  return _IMP_cnmultifit.MolCnSymmAxisDetector_get_symmetry_axis_index(self)
1044 
1045 
1046  def show(self, *args):
1047  """
1048  show(MolCnSymmAxisDetector self, _ostream out)
1049  show(MolCnSymmAxisDetector self)
1050  """
1051  return _IMP_cnmultifit.MolCnSymmAxisDetector_show(self, *args)
1052 
1053 
1054  def calc_symm_score(self, symm_axis_ind):
1055  """calc_symm_score(MolCnSymmAxisDetector self, int symm_axis_ind) -> float"""
1056  return _IMP_cnmultifit.MolCnSymmAxisDetector_calc_symm_score(self, symm_axis_ind)
1057 
1058 
1059  def __str__(self):
1060  """__str__(MolCnSymmAxisDetector self) -> std::string"""
1061  return _IMP_cnmultifit.MolCnSymmAxisDetector___str__(self)
1062 
1063 
1064  def __repr__(self):
1065  """__repr__(MolCnSymmAxisDetector self) -> std::string"""
1066  return _IMP_cnmultifit.MolCnSymmAxisDetector___repr__(self)
1067 
1068  __swig_destroy__ = _IMP_cnmultifit.delete_MolCnSymmAxisDetector
1069  __del__ = lambda self: None
1070 MolCnSymmAxisDetector_swigregister = _IMP_cnmultifit.MolCnSymmAxisDetector_swigregister
1071 MolCnSymmAxisDetector_swigregister(MolCnSymmAxisDetector)
1072 
1073 class AlignSymmetric(object):
1074  """Proxy of C++ IMP::cnmultifit::AlignSymmetric class"""
1075  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
1076 
1077  def __init__(self, dmap, threshold, cn_symm_deg):
1078  """__init__(IMP::cnmultifit::AlignSymmetric self, DensityMap dmap, float threshold, int cn_symm_deg) -> AlignSymmetric"""
1079  this = _IMP_cnmultifit.new_AlignSymmetric(dmap, threshold, cn_symm_deg)
1080  try:
1081  self.this.append(this)
1082  except:
1083  self.this = this
1084 
1085  def get_sorted_principal_values(self):
1086  """get_sorted_principal_values(AlignSymmetric self) -> IMP::Floats"""
1087  return _IMP_cnmultifit.AlignSymmetric_get_sorted_principal_values(self)
1088 
1089 
1090  def score_alignment(self, mhs, max_allowed_diff):
1091  """score_alignment(AlignSymmetric self, IMP::atom::Hierarchies mhs, float max_allowed_diff) -> int"""
1092  return _IMP_cnmultifit.AlignSymmetric_score_alignment(self, mhs, max_allowed_diff)
1093 
1094 
1095  def get_symm_axis_alignments_from_model_to_density(self, mhs, sample_translation, fine_rotation_sampling=True):
1096  """
1097  get_symm_axis_alignments_from_model_to_density(AlignSymmetric self, IMP::atom::Hierarchies mhs, bool sample_translation, bool fine_rotation_sampling=True) -> IMP::algebra::Transformation3Ds
1098  get_symm_axis_alignments_from_model_to_density(AlignSymmetric self, IMP::atom::Hierarchies mhs, bool sample_translation) -> IMP::algebra::Transformation3Ds
1099  """
1100  return _IMP_cnmultifit.AlignSymmetric_get_symm_axis_alignments_from_model_to_density(self, mhs, sample_translation, fine_rotation_sampling)
1101 
1102 
1103  def show(self, *args):
1104  """
1105  show(AlignSymmetric self, _ostream out)
1106  show(AlignSymmetric self)
1107  """
1108  return _IMP_cnmultifit.AlignSymmetric_show(self, *args)
1109 
1110 
1111  def __str__(self):
1112  """__str__(AlignSymmetric self) -> std::string"""
1113  return _IMP_cnmultifit.AlignSymmetric___str__(self)
1114 
1115 
1116  def __repr__(self):
1117  """__repr__(AlignSymmetric self) -> std::string"""
1118  return _IMP_cnmultifit.AlignSymmetric___repr__(self)
1119 
1120  __swig_destroy__ = _IMP_cnmultifit.delete_AlignSymmetric
1121  __del__ = lambda self: None
1122 AlignSymmetric_swigregister = _IMP_cnmultifit.AlignSymmetric_swigregister
1123 AlignSymmetric_swigregister(AlignSymmetric)
1124 
1125 
1126 def generate_cn_transformations(mhs, symm_deg):
1127  """generate_cn_transformations(IMP::atom::Hierarchies mhs, int symm_deg) -> IMP::algebra::Transformation3Ds"""
1128  return _IMP_cnmultifit.generate_cn_transformations(mhs, symm_deg)
1129 
1130 def generate_translations_along_symm_axis(mhs, symm_deg):
1131  """generate_translations_along_symm_axis(IMP::atom::Hierarchies mhs, int symm_deg) -> IMP::algebra::Transformation3Ds"""
1132  return _IMP_cnmultifit.generate_translations_along_symm_axis(mhs, symm_deg)
1133 
1134 def symmetry_local_fitting(mhs, cn_symm_deg, dn_symm_deg, dmap, num_of_trans_to_consider):
1135  """symmetry_local_fitting(IMP::atom::Hierarchies mhs, int cn_symm_deg, int dn_symm_deg, DensityMap dmap, int num_of_trans_to_consider) -> FittingSolutions"""
1136  return _IMP_cnmultifit.symmetry_local_fitting(mhs, cn_symm_deg, dn_symm_deg, dmap, num_of_trans_to_consider)
1137 
1138 def build_cn_dens_assembly(subunit_dens, asmb_dens_header, monomer_t, symm_deg):
1139  """build_cn_dens_assembly(DensityMap subunit_dens, DensityHeader asmb_dens_header, Transformation3D monomer_t, int symm_deg) -> DensityMap"""
1140  return _IMP_cnmultifit.build_cn_dens_assembly(subunit_dens, asmb_dens_header, monomer_t, symm_deg)
1141 
1142 def transform_cn_assembly(mhs, monomer_t):
1143  """transform_cn_assembly(IMP::atom::Hierarchies mhs, Transformation3D monomer_t)"""
1144  return _IMP_cnmultifit.transform_cn_assembly(mhs, monomer_t)
1145 
1146 def fit_cn_assembly(*args):
1147  """
1148  fit_cn_assembly(IMP::atom::Hierarchies mhs, int dn_symm_deg, DensityMap dmap, float threshold, AlignSymmetric aligner, bool sample_translation=False, bool fine_rotational_sampling=True) -> FittingSolutions
1149  fit_cn_assembly(IMP::atom::Hierarchies mhs, int dn_symm_deg, DensityMap dmap, float threshold, AlignSymmetric aligner, bool sample_translation=False) -> FittingSolutions
1150  fit_cn_assembly(IMP::atom::Hierarchies mhs, int dn_symm_deg, DensityMap dmap, float threshold, AlignSymmetric aligner) -> FittingSolutions
1151  fit_cn_assembly(DensityMap asmb_map, MolCnSymmAxisDetector symm_mol, DensityMap dmap, CnSymmAxisDetector symm_map, int symm_deg, float threshold) -> FittingSolutions
1152  """
1153  return _IMP_cnmultifit.fit_cn_assembly(*args)
1154 
1155 def pca_matching(pca1, pca2, resolution):
1156  """pca_matching(PrincipalComponentAnalysis3D pca1, PrincipalComponentAnalysis3D pca2, float resolution) -> bool"""
1157  return _IMP_cnmultifit.pca_matching(pca1, pca2, resolution)
1158 
1159 def cn_symm_score(mhs, center, direction, symm_deg):
1160  """cn_symm_score(IMP::atom::Hierarchies mhs, Vector3D center, Vector3D direction, int symm_deg) -> float"""
1161  return _IMP_cnmultifit.cn_symm_score(mhs, center, direction, symm_deg)
1162 
1163 def prune_by_pca(param_fn, sols, dn=1):
1164  """
1165  prune_by_pca(std::string const & param_fn, IMP::multifit::FittingSolutionRecords const & sols, int dn=1) -> IMP::multifit::FittingSolutionRecords
1166  prune_by_pca(std::string const & param_fn, IMP::multifit::FittingSolutionRecords const & sols) -> IMP::multifit::FittingSolutionRecords
1167  """
1168  return _IMP_cnmultifit.prune_by_pca(param_fn, sols, dn)
1169 
1170 def calc_transformation_around_axis(a, b, angle_rad):
1171  """calc_transformation_around_axis(Vector3D a, Vector3D b, float angle_rad) -> Transformation3D"""
1172  return _IMP_cnmultifit.calc_transformation_around_axis(a, b, angle_rad)
1173 
1174 def get_cn_rmsd(mh1, mh2):
1175  """get_cn_rmsd(IMP::atom::Hierarchies mh1, IMP::atom::Hierarchies mh2) -> float"""
1176  return _IMP_cnmultifit.get_cn_rmsd(mh1, mh2)
1177 
1178 def do_all_fitting(*args):
1179  """
1180  do_all_fitting(std::string const param_filename, std::string const chimera_filename)
1181  do_all_fitting(std::string const param_filename)
1182  """
1183  return _IMP_cnmultifit.do_all_fitting(*args)
1184 
1185 def get_rmsd_for_models(param_filename, trans_filename, ref_filename, start_model=0, end_model=-1):
1186  """
1187  get_rmsd_for_models(std::string const param_filename, std::string const trans_filename, std::string const ref_filename, int start_model=0, int end_model=-1) -> IMP::Floats
1188  get_rmsd_for_models(std::string const param_filename, std::string const trans_filename, std::string const ref_filename, int start_model=0) -> IMP::Floats
1189  get_rmsd_for_models(std::string const param_filename, std::string const trans_filename, std::string const ref_filename) -> IMP::Floats
1190  """
1191  return _IMP_cnmultifit.get_rmsd_for_models(param_filename, trans_filename, ref_filename, start_model, end_model)
1192 
1193 _all_commands = ["build", "rmsd", "surface",
1194  "param", "chimera_models"]
1195 
1196 
1197 def get_module_version():
1198  """get_module_version() -> std::string const"""
1199  return _IMP_cnmultifit.get_module_version()
1200 
1201 def get_example_path(fname):
1202  """get_example_path(std::string fname) -> std::string"""
1203  return _IMP_cnmultifit.get_example_path(fname)
1204 
1205 def get_data_path(fname):
1206  """get_data_path(std::string fname) -> std::string"""
1207  return _IMP_cnmultifit.get_data_path(fname)
1208 
1209 from . import _version_check
1210 _version_check.check_version(get_module_version())
1211 __version__ = get_module_version()
1212 
1213 
1214 
IMP::container
Various classes to hold sets of particles.
IMP::cnmultifit::do_all_fitting
void do_all_fitting(const std::string param_filename, const std::string chimera_filename="")
High level interface to build cyclic symmetric complexes.
IMP::cgal
Make CGAL functionality available to IMP.
IMP::get_data_path
std::string get_data_path(std::string file_name)
Return the full path to one of this module's data files.
IMP::score_functor
Composable functors to implement scores via compile-time composition.
IMP::statistics
Code to compute statistical measures.
IMP::cnmultifit::cn_symm_score
float cn_symm_score(atom::Hierarchies mhs, const algebra::Vector3D &center, const algebra::Vector3D &direction, int symm_deg)
scores an input vector as a symmetry axis
IMP::multifit
Fitting atomic structures into a cryo-electron microscopy density map.
IMP::em
Basic utilities for handling cryo-electron microscopy 3D density maps.
IMP::cnmultifit::get_cn_rmsd
float get_cn_rmsd(atom::Hierarchies mh1, atom::Hierarchies mh2)
Find correspondence between the two rings and calculate rmsd.
IMP::core::show
std::ostream & show(Hierarchy h, std::ostream &out=std::cout)
Print the hierarchy using a given decorator to display each node.
Definition: core/Hierarchy.h:397
IMP::core
Basic functionality that is expected to be used by a wide variety of IMP users.
IMP::algebra
General purpose algebraic and geometric methods that are expected to be used by a wide variety of IMP...
IMP::get_example_path
std::string get_example_path(std::string file_name)
Return the full path to one of this module's example files.
IMP::cnmultifit::fit_cn_assembly
em::FittingSolutions fit_cn_assembly(atom::Hierarchies mhs, int dn_symm_deg, em::DensityMap *dmap, float threshold, const AlignSymmetric &aligner, bool sample_translation=false, bool fine_rotational_sampling=true)
Fit a symmetric model to its density.
IMP::display
Output IMP model data in various file formats.
IMP::atom
Functionality for loading, creating, manipulating and scoring atomic structures.
IMP::rmf
Support for the RMF file format for storing hierarchical molecular data and markup.
IMP::domino
Divide-and-conquer inferential optimization in discrete space.
IMP::saxs
Support for small angle X-ray scattering (SAXS) data.
IMP::get_module_version
std::string get_module_version()
Return the version of this module, as a string.
Definition: EMageFit/__init__.py:5
IMP::isd
Inferential scoring building on methods developed as part of the Inferential Structure Determination ...