IMP Reference Guide
2.14.0
The Integrative Modeling Platform
|
Converters of density values. More...
#include <IMP/em/em_config.h>
#include <IMP/base_types.h>
#include <IMP/macros.h>
#include "DensityMap.h"
#include "SampledDensityMap.h"
#include "SurfaceShellDensityMap.h"
#include <IMP/Particle.h>
#include "IMP/core/XYZ.h"
#include "IMP/algebra/Vector3D.h"
Go to the source code of this file.
Namespaces | |
IMP | |
Base functionality and abstract base classes for representation, scoring and sampling. | |
IMP::em | |
Basic utilities for handling cryo-electron microscopy 3D density maps. | |
Functions | |
Float | IMP::em::calculate_intersection_score (const SurfaceShellDensityMap *d1, const SurfaceShellDensityMap *d2) |
Particles | IMP::em::density2particles (DensityMap *dmap, Float threshold, Model *m, int step=1) |
Convert a density grid to a set of particles. More... | |
algebra::Vector3Ds | IMP::em::density2vectors (DensityMap *dmap, Float threshold) |
Convert a density grid to a set of vectors. More... | |
SampledDensityMap * | IMP::em::particles2binarized_density (const ParticlesTemp &ps, Float resolution, Float apix, int sig_cutoff=3, const FloatKey &weight_key=IMP::atom::Mass::get_mass_key()) |
SampledDensityMap * | IMP::em::particles2density (const ParticlesTemp &ps, Float resolution, Float apix, int sig_cutoff=3, const FloatKey &weight_key=IMP::atom::Mass::get_mass_key()) |
Resample a set of particles into a density grid. More... | |
SurfaceShellDensityMap * | IMP::em::particles2surface (const ParticlesTemp &ps, Float apix, const FloatKey &weight_key=IMP::atom::Mass::get_mass_key()) |
Resample a set of particles into a density grid. More... | |
Converters of density values.
Copyright 2007-2020 IMP Inventors. All rights reserved.
Definition in file converters.h.