add_to_rest_length_derivative(double d, DerivativeAccumulator &da) (defined in IMP::npctransport::RelaxingSpring) | IMP::npctransport::RelaxingSpring | |
Decorator(Model *m, ParticleIndex pi) (defined in IMP::Decorator) | IMP::Decorator | protected |
Decorator() (defined in IMP::Decorator) | IMP::Decorator | protected |
Decorator(ParticleAdaptor p) (defined in IMP::Decorator) | IMP::Decorator | explicitprotected |
get_bonded_particle_0() const (defined in IMP::npctransport::RelaxingSpring) | IMP::npctransport::RelaxingSpring | |
get_bonded_particle_0_key() (defined in IMP::npctransport::RelaxingSpring) | IMP::npctransport::RelaxingSpring | static |
get_bonded_particle_1() const (defined in IMP::npctransport::RelaxingSpring) | IMP::npctransport::RelaxingSpring | |
get_bonded_particle_1_key() (defined in IMP::npctransport::RelaxingSpring) | IMP::npctransport::RelaxingSpring | static |
get_bonded_particle_index_0() const (defined in IMP::npctransport::RelaxingSpring) | IMP::npctransport::RelaxingSpring | |
get_bonded_particle_index_1() const (defined in IMP::npctransport::RelaxingSpring) | IMP::npctransport::RelaxingSpring | |
get_equilibrium_rest_length_factor() const | IMP::npctransport::RelaxingSpring | |
get_equilibrium_rest_length_factor_key() | IMP::npctransport::RelaxingSpring | static |
get_is_setup(const IMP::ParticleAdaptor &p) (defined in IMP::npctransport::RelaxingSpring) | IMP::npctransport::RelaxingSpring | static |
get_is_setup(Model *m, ParticleIndex pi) | IMP::npctransport::RelaxingSpring | static |
get_is_valid() const | IMP::Decorator | |
get_model() const | IMP::Decorator | |
get_particle() const | IMP::Decorator | |
get_particle_index() const | IMP::Decorator | |
get_rest_length() const | IMP::npctransport::RelaxingSpring | |
get_rest_length_derivative() (defined in IMP::npctransport::RelaxingSpring) | IMP::npctransport::RelaxingSpring | |
get_rest_length_diffusion_coefficient() const | IMP::npctransport::RelaxingSpring | |
get_rest_length_diffusion_coefficient_key() | IMP::npctransport::RelaxingSpring | static |
get_rest_length_key() | IMP::npctransport::RelaxingSpring | static |
operator Particle *() const (defined in IMP::Decorator) | IMP::Decorator | |
operator ParticleIndex() const (defined in IMP::Decorator) | IMP::Decorator | |
operator->() const (defined in IMP::Decorator) | IMP::Decorator | |
RelaxingSpring() (defined in IMP::npctransport::RelaxingSpring) | IMP::npctransport::RelaxingSpring | |
RelaxingSpring(::IMP::Model *m,::IMP::ParticleIndex id) (defined in IMP::npctransport::RelaxingSpring) | IMP::npctransport::RelaxingSpring | |
RelaxingSpring(const IMP::ParticleAdaptor &d) (defined in IMP::npctransport::RelaxingSpring) | IMP::npctransport::RelaxingSpring | explicit |
set_equilibrium_rest_length_factor(Float t) | IMP::npctransport::RelaxingSpring | |
set_rest_length(Float t) | IMP::npctransport::RelaxingSpring | |
set_rest_length_diffusion_coefficient(Float t) | IMP::npctransport::RelaxingSpring | |
setup_particle(Model *m, ParticleIndex pi, ParticleIndex bonded_pi0, ParticleIndex bonded_pi1, double equilibrium_rest_length_factor, double rest_length_diffusion_coefficient) | IMP::npctransport::RelaxingSpring | static |
setup_particle(IMP::ParticleAdaptor decorator, ParticleIndex bonded_pi0, ParticleIndex bonded_pi1, double equilibrium_rest_length_factor, double rest_length_diffusion_coefficient) (defined in IMP::npctransport::RelaxingSpring) | IMP::npctransport::RelaxingSpring | static |
show(std::ostream &out=std::cout) const (defined in IMP::npctransport::RelaxingSpring) | IMP::npctransport::RelaxingSpring | |
Value() (defined in IMP::Value) | IMP::Value | protected |