| clear_caches() | IMP::Object | virtual |
| do_destroy() | IMP::Object | protectedvirtual |
| FGChain(IMP::Particle *root, double backbone_k=0.0, double rest_length_factor=1.0, std::string name="chain %1%") | IMP::npctransport::FGChain | |
| get_backbone_k() const | IMP::npctransport::FGChain | |
| get_bead(unsigned int i) const | IMP::npctransport::FGChain | |
| get_bead_index(unsigned int i) const | IMP::npctransport::FGChain | |
| get_beads() const | IMP::npctransport::FGChain | |
| get_chain_restraints(Scoring const *scoring_manager) | IMP::npctransport::FGChain | virtual |
| get_check_level() const (defined in IMP::Object) | IMP::Object | |
| get_log_level() const (defined in IMP::Object) | IMP::Object | |
| get_name() const (defined in IMP::Object) | IMP::Object | |
| get_number_of_beads() const | IMP::npctransport::FGChain | |
| get_rest_length_factor() const | IMP::npctransport::FGChain | |
| get_root() const (defined in IMP::npctransport::FGChain) | IMP::npctransport::FGChain | |
| get_type_name() const (defined in IMP::npctransport::FGChain) | IMP::npctransport::FGChain | virtual |
| get_version_info() const | IMP::npctransport::FGChain | virtual |
| NonCopyable() (defined in IMP::NonCopyable) | IMP::NonCopyable | protected |
| Object(std::string name) | IMP::Object | protected |
| set_backbone_k(double k) | IMP::npctransport::FGChain | |
| set_check_level(CheckLevel l) | IMP::Object | |
| set_log_level(LogLevel l) | IMP::Object | |
| set_name(std::string name) (defined in IMP::Object) | IMP::Object | |
| set_rest_length_factor(double rlf) | IMP::npctransport::FGChain | |
| set_root(Particle *p) | IMP::npctransport::FGChain | protected |
| set_root(atom::Hierarchy root) | IMP::npctransport::FGChain | protected |
| set_was_used(bool tf) const | IMP::Object | |
| show(std::ostream &out=std::cout) const (defined in IMP::Object) | IMP::Object | |
| ~FGChain() (defined in IMP::npctransport::FGChain) | IMP::npctransport::FGChain | protectedvirtual |
| ~Object() (defined in IMP::Object) | IMP::Object | virtual |
