accept() | IMP::core::MonteCarloMover | |
add_entry_point(Floats fl) | IMP::core::RigidBodyTunneler | |
clear_caches() | IMP::Object | virtual |
do_accept() | IMP::core::MonteCarloMover | protectedvirtual |
do_destroy() | IMP::Object | protectedvirtual |
do_get_inputs() const | IMP::core::RigidBodyTunneler | protectedvirtual |
do_get_interactions() const | IMP::ModelObject | protectedvirtual |
do_get_outputs() const | IMP::core::MonteCarloMover | protectedvirtual |
do_propose() | IMP::core::RigidBodyTunneler | protectedvirtual |
do_reject() | IMP::core::RigidBodyTunneler | protectedvirtual |
get_check_level() const (defined in IMP::Object) | IMP::Object | |
get_has_dependencies() const | IMP::ModelObject | |
get_has_required_score_states() const | IMP::ModelObject | |
get_inputs() const | IMP::ModelObject | |
get_interactions() const | IMP::ModelObject | |
get_log_level() const (defined in IMP::Object) | IMP::Object | |
get_model() const (defined in IMP::ModelObject) | IMP::ModelObject | |
get_name() const (defined in IMP::Object) | IMP::Object | |
get_number_of_accepted() const (defined in IMP::core::MonteCarloMover) | IMP::core::MonteCarloMover | |
get_number_of_calls() const (defined in IMP::core::RigidBodyTunneler) | IMP::core::RigidBodyTunneler | |
get_number_of_impossible_moves() const (defined in IMP::core::RigidBodyTunneler) | IMP::core::RigidBodyTunneler | |
get_number_of_proposed() const (defined in IMP::core::MonteCarloMover) | IMP::core::MonteCarloMover | |
get_number_of_proposed_moves() const (defined in IMP::core::RigidBodyTunneler) | IMP::core::RigidBodyTunneler | |
get_number_of_rejected_moves() const (defined in IMP::core::RigidBodyTunneler) | IMP::core::RigidBodyTunneler | |
get_outputs() const | IMP::ModelObject | |
get_reduced_coordinates(Model *m, ParticleIndex target, ParticleIndex ref) | IMP::core::RigidBodyTunneler | static |
get_reduced_coordinates(Model *m, ParticleIndex pi) | IMP::core::RigidBodyTunneler | static |
get_required_score_states() const | IMP::ModelObject | |
get_type_name() const (defined in IMP::core::RigidBodyTunneler) | IMP::core::RigidBodyTunneler | virtual |
get_version_info() const | IMP::core::RigidBodyTunneler | virtual |
handle_set_has_required_score_states(bool) | IMP::ModelObject | protectedvirtual |
ModelObject(Model *m, std::string name) (defined in IMP::ModelObject) | IMP::ModelObject | |
MonteCarloMover(Model *m, std::string name) (defined in IMP::core::MonteCarloMover) | IMP::core::MonteCarloMover | |
NonCopyable() (defined in IMP::NonCopyable) | IMP::NonCopyable | protected |
Object(std::string name) | IMP::Object | protected |
propose() | IMP::core::MonteCarloMover | |
reject() | IMP::core::MonteCarloMover | |
reset_statistics() (defined in IMP::core::MonteCarloMover) | IMP::core::MonteCarloMover | |
reset_stats() | IMP::core::RigidBodyTunneler | |
RigidBodyTunneler(Model *m, ParticleIndexes pis, ParticleIndex ref, double k, double move_probability=1.) | IMP::core::RigidBodyTunneler | |
set_check_level(CheckLevel l) | IMP::Object | |
set_has_dependencies(bool tf) | IMP::ModelObject | |
set_has_required_score_states(bool tf) | IMP::ModelObject | |
set_log_level(LogLevel l) | IMP::Object | |
set_name(std::string name) (defined in IMP::Object) | IMP::Object | |
set_reduced_coordinates(Model *m, ParticleIndex target, ParticleIndex ref, Floats coords) | IMP::core::RigidBodyTunneler | static |
set_was_used(bool tf) const | IMP::Object | |
show(std::ostream &out=std::cout) const (defined in IMP::Object) | IMP::Object | |
~ModelObject() (defined in IMP::ModelObject) | IMP::ModelObject | |
~Object() (defined in IMP::Object) | IMP::Object | virtual |
~RigidBodyTunneler() (defined in IMP::core::RigidBodyTunneler) | IMP::core::RigidBodyTunneler | protectedvirtual |