subset_filters.h File Reference

A Bayesian inference-based sampler. More...

#include <IMP/domino/domino_config.h>
#include "particle_states.h"
#include "Assignment.h"
#include "Subset.h"
#include "domino_macros.h"
#include "subset_scores.h"
#include <IMP/Object.h>
#include <IMP/Pointer.h>
#include <boost/unordered_map.hpp>
#include <IMP/Configuration.h>
#include <IMP/Model.h>
#include <IMP/macros.h>
#include <boost/dynamic_bitset.hpp>
#include <IMP/utility_macros.h>
#include <IMP/vector_property_map.h>
#include <boost/pending/disjoint_sets.hpp>

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Classes
class	IMP::domino::DisjointSetsSubsetFilterTable
	A base class. More...
class	IMP::domino::EqualitySubsetFilterTable
	Do not allow two particles to be in the same state. More...
class	IMP::domino::EquivalenceAndExclusionSubsetFilterTable
	Define sets of equivalent and exclusive particles. More...
class	IMP::domino::EquivalenceSubsetFilterTable
	Define sets of equivalent particles. More...
class	IMP::domino::ExclusionSubsetFilterTable
	Do not allow two particles to be in the same state. More...
class	IMP::domino::ListSubsetFilterTable
	Maintain an explicit list of what states each particle is allowed to have. More...
class	IMP::domino::MinimumRestraintScoreSubsetFilterTable
	Filter a configuration of the subset using the Model thresholds. More...
class	IMP::domino::PairListSubsetFilterTable
class	IMP::domino::ProbabilisticSubsetFilterTable
class	IMP::domino::RestraintScoreSubsetFilterTable
	Filter a configuration of the subset using the Model thresholds. More...
class	IMP::domino::SubsetFilter
class	IMP::domino::SubsetFilterTable

Namespaces
	IMP
	Base functionality and abstract base classes for representation, scoring and sampling.
	IMP::domino
	Divide-and-conquer inferential optimization in discrete space.

Typedefs
typedef IMP::Vector < IMP::Pointer < EqualitySubsetFilterTable > >	IMP::domino::EqualitySubsetFilterTables
typedef IMP::Vector < IMP::WeakPointer < EqualitySubsetFilterTable > >	IMP::domino::EqualitySubsetFilterTablesTemp
typedef IMP::Vector < IMP::Pointer < EquivalenceAndExclusionSubsetFilterTable > >	IMP::domino::EquivalenceAndExclusionSubsetFilterTables
typedef IMP::Vector < IMP::WeakPointer < EquivalenceAndExclusionSubsetFilterTable > >	IMP::domino::EquivalenceAndExclusionSubsetFilterTablesTemp
typedef IMP::Vector < IMP::Pointer < EquivalenceSubsetFilterTable > >	IMP::domino::EquivalenceSubsetFilterTables
typedef IMP::Vector < IMP::WeakPointer < EquivalenceSubsetFilterTable > >	IMP::domino::EquivalenceSubsetFilterTablesTemp
typedef IMP::Vector < IMP::Pointer < ExclusionSubsetFilterTable > >	IMP::domino::ExclusionSubsetFilterTables
typedef IMP::Vector < IMP::WeakPointer < ExclusionSubsetFilterTable > >	IMP::domino::ExclusionSubsetFilterTablesTemp
typedef IMP::Vector < IMP::Pointer < ListSubsetFilterTable > >	IMP::domino::ListSubsetFilterTables
typedef IMP::Vector < IMP::WeakPointer < ListSubsetFilterTable > >	IMP::domino::ListSubsetFilterTablesTemp
typedef IMP::Vector < IMP::Pointer < MinimumRestraintScoreSubsetFilterTable > >	IMP::domino::MinimumRestraintScoreSubsetFilterTables
typedef IMP::Vector < IMP::WeakPointer < MinimumRestraintScoreSubsetFilterTable > >	IMP::domino::MinimumRestraintScoreSubsetFilterTablesTemp
typedef IMP::Vector < IMP::Pointer < PairListSubsetFilterTable > >	IMP::domino::PairListSubsetFilterTables
typedef IMP::Vector < IMP::WeakPointer < PairListSubsetFilterTable > >	IMP::domino::PairListSubsetFilterTablesTemp
typedef IMP::Vector < IMP::Pointer < RestraintScoreSubsetFilterTable > >	IMP::domino::RestraintScoreSubsetFilterTables
typedef IMP::Vector < IMP::WeakPointer < RestraintScoreSubsetFilterTable > >	IMP::domino::RestraintScoreSubsetFilterTablesTemp
typedef IMP::Vector < IMP::Pointer< SubsetFilter > >	IMP::domino::SubsetFilters
typedef IMP::Vector < IMP::WeakPointer < SubsetFilter > >	IMP::domino::SubsetFiltersTemp
typedef IMP::Vector < IMP::Pointer < SubsetFilterTable > >	IMP::domino::SubsetFilterTables
typedef IMP::Vector < IMP::WeakPointer < SubsetFilterTable > >	IMP::domino::SubsetFilterTablesTemp

Detailed Description

A Bayesian inference-based sampler.

Copyright 2007-2020 IMP Inventors. All rights reserved.

Definition in file subset_filters.h.