IMP Reference Guide
2.12.0
The Integrative Modeling Platform
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Scoring functions for 2D Copyright 2007-2019 IMP Inventors. All rights reserved. More...
#include "IMP/em2d/em2d_config.h"
#include "IMP/em2d/Image.h"
#include "IMP/em2d/opencv_interface.h"
#include "IMP/em2d/RegistrationResult.h"
#include "IMP/Object.h"
#include <IMP/warning_macros.h>
#include <functional>
Go to the source code of this file.
Classes | |
class | IMP::em2d::ChiSquaredScore |
Score based on Chi^2 = ((pixels_image - pixels_projection)/stddev_image)^2. More... | |
class | IMP::em2d::EM2DScore |
class | IMP::em2d::HasHigherCCC< T > |
Comparison by value of the ccc. More... | |
class | IMP::em2d::HasLowerScore< T > |
Compare two classes that return a score. More... | |
class | IMP::em2d::LessPairBySecond< T > |
Comparison of pairs by checking the second element. More... | |
class | IMP::em2d::MeanAbsoluteDifference |
Score based on the mean of the absolute difference. More... | |
class | IMP::em2d::ScoreFunction |
Base class for all scoring functions related to em2d. More... | |
Namespaces | |
IMP | |
Base functionality and abstract base classes for representation, scoring and sampling. | |
IMP::em2d | |
Restraints using electron microscopy 2D images (class averages). | |
Typedefs | |
typedef IMP::Vector < IMP::Pointer < ChiSquaredScore > > | IMP::em2d::ChiSquaredScores |
typedef IMP::Vector < IMP::WeakPointer < ChiSquaredScore > > | IMP::em2d::ChiSquaredScoresTemp |
typedef IMP::Vector < IMP::Pointer< EM2DScore > > | IMP::em2d::EM2DScores |
typedef IMP::Vector < IMP::WeakPointer< EM2DScore > > | IMP::em2d::EM2DScoresTemp |
typedef IMP::Vector < IMP::Pointer < MeanAbsoluteDifference > > | IMP::em2d::MeanAbsoluteDifferences |
typedef IMP::Vector < IMP::WeakPointer < MeanAbsoluteDifference > > | IMP::em2d::MeanAbsoluteDifferencesTemp |
typedef IMP::Vector < IMP::Pointer< ScoreFunction > > | IMP::em2d::ScoreFunctions |
typedef IMP::Vector < IMP::WeakPointer < ScoreFunction > > | IMP::em2d::ScoreFunctionsTemp |
Functions | |
double | IMP::em2d::get_average_rotation_error (const RegistrationResults &correct_RRs, const RegistrationResults &computed_RRs) |
double | IMP::em2d::get_average_shift_error (const RegistrationResults &correct_RRs, const RegistrationResults &computed_RRs) |
double | IMP::em2d::get_cross_correlation_coefficient (const cv::Mat &m1, const cv::Mat &m2) |
Computes the cross-correlation coefficient between to matrices. More... | |
double | IMP::em2d::get_global_score (const RegistrationResults &RRs) |
double | IMP::em2d::get_rotation_error (const RegistrationResult &rr1, const RegistrationResult &rr2) |
double | IMP::em2d::get_shift_error (const RegistrationResult &rr1, const RegistrationResult &rr2) |
Distance between the two in-plane translations. More... | |
Scoring functions for 2D Copyright 2007-2019 IMP Inventors. All rights reserved.
Definition in file scores2D.h.