10 from __future__
import print_function, division, absolute_import
15 from sys
import version_info
as _swig_python_version_info
16 if _swig_python_version_info >= (2, 7, 0):
17 def swig_import_helper():
19 pkg = __name__.rpartition(
'.')[0]
20 mname =
'.'.join((pkg,
'_IMP_pepdock')).lstrip(
'.')
22 return importlib.import_module(mname)
24 return importlib.import_module(
'_IMP_pepdock')
25 _IMP_pepdock = swig_import_helper()
26 del swig_import_helper
27 elif _swig_python_version_info >= (2, 6, 0):
28 def swig_import_helper():
29 from os.path
import dirname
33 fp, pathname, description = imp.find_module(
'_IMP_pepdock', [dirname(__file__)])
39 _mod = imp.load_module(
'_IMP_pepdock', fp, pathname, description)
43 _IMP_pepdock = swig_import_helper()
44 del swig_import_helper
47 del _swig_python_version_info
49 _swig_property = property
54 import builtins
as __builtin__
58 def _swig_setattr_nondynamic(self, class_type, name, value, static=1):
59 if (name ==
"thisown"):
60 return self.this.own(value)
62 if type(value).__name__ ==
'SwigPyObject':
63 self.__dict__[name] = value
65 method = class_type.__swig_setmethods__.get(name,
None)
67 return method(self, value)
69 object.__setattr__(self, name, value)
71 raise AttributeError(
"You cannot add attributes to %s" % self)
74 def _swig_setattr(self, class_type, name, value):
75 return _swig_setattr_nondynamic(self, class_type, name, value, 0)
78 def _swig_getattr(self, class_type, name):
79 if (name ==
"thisown"):
80 return self.this.own()
81 method = class_type.__swig_getmethods__.get(name,
None)
84 raise AttributeError(
"'%s' object has no attribute '%s'" % (class_type.__name__, name))
89 strthis =
"proxy of " + self.this.__repr__()
90 except __builtin__.Exception:
92 return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
95 def _swig_setattr_nondynamic_method(set):
96 def set_attr(self, name, value):
97 if (name ==
"thisown"):
98 return self.this.own(value)
99 if hasattr(self, name)
or (name ==
"this"):
100 set(self, name, value)
102 raise AttributeError(
"You cannot add attributes to %s" % self)
108 weakref_proxy = weakref.proxy
109 except __builtin__.Exception:
110 weakref_proxy =
lambda x: x
113 class IMP_PEPDOCK_SwigPyIterator(object):
114 """Proxy of C++ swig::IMP_PEPDOCK_SwigPyIterator class."""
116 thisown = _swig_property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
'The membership flag')
118 def __init__(self, *args, **kwargs):
119 raise AttributeError(
"No constructor defined - class is abstract")
120 __repr__ = _swig_repr
121 __swig_destroy__ = _IMP_pepdock.delete_IMP_PEPDOCK_SwigPyIterator
122 __del__ =
lambda self:
None
125 """value(IMP_PEPDOCK_SwigPyIterator self) -> PyObject *"""
126 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_value(self)
131 incr(IMP_PEPDOCK_SwigPyIterator self, size_t n=1) -> IMP_PEPDOCK_SwigPyIterator
132 incr(IMP_PEPDOCK_SwigPyIterator self) -> IMP_PEPDOCK_SwigPyIterator
134 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_incr(self, n)
139 decr(IMP_PEPDOCK_SwigPyIterator self, size_t n=1) -> IMP_PEPDOCK_SwigPyIterator
140 decr(IMP_PEPDOCK_SwigPyIterator self) -> IMP_PEPDOCK_SwigPyIterator
142 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_decr(self, n)
145 def distance(self, x):
146 """distance(IMP_PEPDOCK_SwigPyIterator self, IMP_PEPDOCK_SwigPyIterator x) -> ptrdiff_t"""
147 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_distance(self, x)
151 """equal(IMP_PEPDOCK_SwigPyIterator self, IMP_PEPDOCK_SwigPyIterator x) -> bool"""
152 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_equal(self, x)
156 """copy(IMP_PEPDOCK_SwigPyIterator self) -> IMP_PEPDOCK_SwigPyIterator"""
157 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_copy(self)
161 """next(IMP_PEPDOCK_SwigPyIterator self) -> PyObject *"""
162 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_next(self)
166 """__next__(IMP_PEPDOCK_SwigPyIterator self) -> PyObject *"""
167 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___next__(self)
171 """previous(IMP_PEPDOCK_SwigPyIterator self) -> PyObject *"""
172 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_previous(self)
175 def advance(self, n):
176 """advance(IMP_PEPDOCK_SwigPyIterator self, ptrdiff_t n) -> IMP_PEPDOCK_SwigPyIterator"""
177 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_advance(self, n)
181 """__eq__(IMP_PEPDOCK_SwigPyIterator self, IMP_PEPDOCK_SwigPyIterator x) -> bool"""
182 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___eq__(self, x)
186 """__ne__(IMP_PEPDOCK_SwigPyIterator self, IMP_PEPDOCK_SwigPyIterator x) -> bool"""
187 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___ne__(self, x)
190 def __iadd__(self, n):
191 """__iadd__(IMP_PEPDOCK_SwigPyIterator self, ptrdiff_t n) -> IMP_PEPDOCK_SwigPyIterator"""
192 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___iadd__(self, n)
195 def __isub__(self, n):
196 """__isub__(IMP_PEPDOCK_SwigPyIterator self, ptrdiff_t n) -> IMP_PEPDOCK_SwigPyIterator"""
197 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___isub__(self, n)
200 def __add__(self, n):
201 """__add__(IMP_PEPDOCK_SwigPyIterator self, ptrdiff_t n) -> IMP_PEPDOCK_SwigPyIterator"""
202 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___add__(self, n)
205 def __sub__(self, *args):
207 __sub__(IMP_PEPDOCK_SwigPyIterator self, ptrdiff_t n) -> IMP_PEPDOCK_SwigPyIterator
208 __sub__(IMP_PEPDOCK_SwigPyIterator self, IMP_PEPDOCK_SwigPyIterator x) -> ptrdiff_t
210 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___sub__(self, *args)
214 IMP_PEPDOCK_SwigPyIterator_swigregister = _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_swigregister
215 IMP_PEPDOCK_SwigPyIterator_swigregister(IMP_PEPDOCK_SwigPyIterator)
223 IMP_DEBUG = _IMP_pepdock.IMP_DEBUG
224 IMP_RELEASE = _IMP_pepdock.IMP_RELEASE
225 IMP_SILENT = _IMP_pepdock.IMP_SILENT
226 IMP_PROGRESS = _IMP_pepdock.IMP_PROGRESS
227 IMP_TERSE = _IMP_pepdock.IMP_TERSE
228 IMP_VERBOSE = _IMP_pepdock.IMP_VERBOSE
229 IMP_MEMORY = _IMP_pepdock.IMP_MEMORY
230 IMP_NONE = _IMP_pepdock.IMP_NONE
231 IMP_USAGE = _IMP_pepdock.IMP_USAGE
232 IMP_INTERNAL = _IMP_pepdock.IMP_INTERNAL
233 IMP_KERNEL_HAS_LOG4CXX = _IMP_pepdock.IMP_KERNEL_HAS_LOG4CXX
234 IMP_COMPILER_HAS_AUTO = _IMP_pepdock.IMP_COMPILER_HAS_AUTO
235 IMP_COMPILER_HAS_DEBUG_VECTOR = _IMP_pepdock.IMP_COMPILER_HAS_DEBUG_VECTOR
236 IMP_COMPILER_HAS_UNIQUE_PTR = _IMP_pepdock.IMP_COMPILER_HAS_UNIQUE_PTR
237 IMP_KERNEL_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_KERNEL_HAS_BOOST_RANDOM
238 IMP_KERNEL_HAS_NUMPY = _IMP_pepdock.IMP_KERNEL_HAS_NUMPY
239 IMP_KERNEL_HAS_GPERFTOOLS = _IMP_pepdock.IMP_KERNEL_HAS_GPERFTOOLS
240 IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER = _IMP_pepdock.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER
241 IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER = _IMP_pepdock.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER
242 IMPKERNEL_SHOW_WARNINGS = _IMP_pepdock.IMPKERNEL_SHOW_WARNINGS
245 class _DirectorObjects(object):
246 """@internal Simple class to keep references to director objects
247 to prevent premature deletion."""
250 def register(self, obj):
251 """Take a reference to a director object; will only work for
252 refcounted C++ classes"""
253 if hasattr(obj,
'get_ref_count'):
254 self._objects.append(obj)
256 """Only drop our reference and allow cleanup by Python if no other
257 Python references exist (we hold 3 references: one in self._objects,
258 one in x, and one in the argument list for getrefcount) *and* no
259 other C++ references exist (the Python object always holds one)"""
260 objs = [x
for x
in self._objects
if sys.getrefcount(x) > 3 \
261 or x.get_ref_count() > 1]
265 def get_object_count(self):
266 """Get number of director objects (useful for testing only)"""
267 return len(self._objects)
268 _director_objects = _DirectorObjects()
270 class _ostream(object):
271 """Proxy of C++ std::ostream class."""
273 thisown = _swig_property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
'The membership flag')
275 def __init__(self, *args, **kwargs):
276 raise AttributeError(
"No constructor defined")
277 __repr__ = _swig_repr
279 def write(self, osa_buf):
280 """write(_ostream self, char const * osa_buf)"""
281 return _IMP_pepdock._ostream_write(self, osa_buf)
283 _ostream_swigregister = _IMP_pepdock._ostream_swigregister
284 _ostream_swigregister(_ostream)
286 IMP_COMPILER_HAS_OVERRIDE = _IMP_pepdock.IMP_COMPILER_HAS_OVERRIDE
287 IMP_COMPILER_HAS_FINAL = _IMP_pepdock.IMP_COMPILER_HAS_FINAL
288 IMP_HAS_NOEXCEPT = _IMP_pepdock.IMP_HAS_NOEXCEPT
289 IMP_C_OPEN_BINARY = _IMP_pepdock.IMP_C_OPEN_BINARY
291 IMP_CGAL_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_CGAL_HAS_BOOST_FILESYSTEM
292 IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS
293 IMP_CGAL_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_CGAL_HAS_BOOST_RANDOM
294 IMP_CGAL_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_CGAL_HAS_BOOST_SYSTEM
295 IMP_CGAL_HAS_NUMPY = _IMP_pepdock.IMP_CGAL_HAS_NUMPY
296 IMPCGAL_SHOW_WARNINGS = _IMP_pepdock.IMPCGAL_SHOW_WARNINGS
298 IMP_ALGEBRA_HAS_IMP_CGAL = _IMP_pepdock.IMP_ALGEBRA_HAS_IMP_CGAL
299 IMP_ALGEBRA_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM
300 IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS
301 IMP_ALGEBRA_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_RANDOM
302 IMP_ALGEBRA_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_SYSTEM
303 IMP_ALGEBRA_HAS_CGAL = _IMP_pepdock.IMP_ALGEBRA_HAS_CGAL
304 IMP_ALGEBRA_HAS_NUMPY = _IMP_pepdock.IMP_ALGEBRA_HAS_NUMPY
305 IMP_ALGEBRA_HAS_ANN = _IMP_pepdock.IMP_ALGEBRA_HAS_ANN
306 IMPALGEBRA_SHOW_WARNINGS = _IMP_pepdock.IMPALGEBRA_SHOW_WARNINGS
308 IMP_DISPLAY_HAS_IMP_CGAL = _IMP_pepdock.IMP_DISPLAY_HAS_IMP_CGAL
309 IMP_DISPLAY_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_FILESYSTEM
310 IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS
311 IMP_DISPLAY_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_RANDOM
312 IMP_DISPLAY_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_SYSTEM
313 IMP_DISPLAY_HAS_CGAL = _IMP_pepdock.IMP_DISPLAY_HAS_CGAL
314 IMP_DISPLAY_HAS_NUMPY = _IMP_pepdock.IMP_DISPLAY_HAS_NUMPY
315 IMPDISPLAY_SHOW_WARNINGS = _IMP_pepdock.IMPDISPLAY_SHOW_WARNINGS
317 IMP_SCORE_FUNCTOR_HAS_IMP_CGAL = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL
318 IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM
319 IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS
320 IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM
321 IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM
322 IMP_SCORE_FUNCTOR_HAS_CGAL = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_CGAL
323 IMP_SCORE_FUNCTOR_HAS_HDF5 = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_HDF5
324 IMP_SCORE_FUNCTOR_HAS_NUMPY = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_NUMPY
325 IMPSCOREFUNCTOR_SHOW_WARNINGS = _IMP_pepdock.IMPSCOREFUNCTOR_SHOW_WARNINGS
327 IMP_STATISTICS_HAS_IMP_CGAL = _IMP_pepdock.IMP_STATISTICS_HAS_IMP_CGAL
328 IMP_STATISTICS_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_FILESYSTEM
329 IMP_STATISTICS_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_PROGRAMOPTIONS
330 IMP_STATISTICS_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_RANDOM
331 IMP_STATISTICS_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_SYSTEM
332 IMP_STATISTICS_HAS_CGAL = _IMP_pepdock.IMP_STATISTICS_HAS_CGAL
333 IMP_STATISTICS_HAS_NUMPY = _IMP_pepdock.IMP_STATISTICS_HAS_NUMPY
334 IMPSTATISTICS_SHOW_WARNINGS = _IMP_pepdock.IMPSTATISTICS_SHOW_WARNINGS
336 IMP_CORE_HAS_IMP_CGAL = _IMP_pepdock.IMP_CORE_HAS_IMP_CGAL
337 IMP_CORE_HAS_IMP_KERNEL = _IMP_pepdock.IMP_CORE_HAS_IMP_KERNEL
338 IMP_CORE_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_CORE_HAS_BOOST_FILESYSTEM
339 IMP_CORE_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS
340 IMP_CORE_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_CORE_HAS_BOOST_RANDOM
341 IMP_CORE_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_CORE_HAS_BOOST_SYSTEM
342 IMP_CORE_HAS_CGAL = _IMP_pepdock.IMP_CORE_HAS_CGAL
343 IMP_CORE_HAS_HDF5 = _IMP_pepdock.IMP_CORE_HAS_HDF5
344 IMP_CORE_HAS_NUMPY = _IMP_pepdock.IMP_CORE_HAS_NUMPY
345 IMPCORE_SHOW_WARNINGS = _IMP_pepdock.IMPCORE_SHOW_WARNINGS
347 IMP_CONTAINER_HAS_IMP_ALGEBRA = _IMP_pepdock.IMP_CONTAINER_HAS_IMP_ALGEBRA
348 IMP_CONTAINER_HAS_IMP_CGAL = _IMP_pepdock.IMP_CONTAINER_HAS_IMP_CGAL
349 IMP_CONTAINER_HAS_IMP_DISPLAY = _IMP_pepdock.IMP_CONTAINER_HAS_IMP_DISPLAY
350 IMP_CONTAINER_HAS_IMP_KERNEL = _IMP_pepdock.IMP_CONTAINER_HAS_IMP_KERNEL
351 IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR = _IMP_pepdock.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR
352 IMP_CONTAINER_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_FILESYSTEM
353 IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS
354 IMP_CONTAINER_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_RANDOM
355 IMP_CONTAINER_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_SYSTEM
356 IMP_CONTAINER_HAS_CGAL = _IMP_pepdock.IMP_CONTAINER_HAS_CGAL
357 IMP_CONTAINER_HAS_HDF5 = _IMP_pepdock.IMP_CONTAINER_HAS_HDF5
358 IMP_CONTAINER_HAS_NUMPY = _IMP_pepdock.IMP_CONTAINER_HAS_NUMPY
359 IMP_CONTAINER_HAS_PYTHON_IHM = _IMP_pepdock.IMP_CONTAINER_HAS_PYTHON_IHM
360 IMP_CONTAINER_HAS_GOOGLE_DENSE_HASH_MAP = _IMP_pepdock.IMP_CONTAINER_HAS_GOOGLE_DENSE_HASH_MAP
361 IMP_CONTAINER_HAS_ROBIN_MAP = _IMP_pepdock.IMP_CONTAINER_HAS_ROBIN_MAP
362 IMPCONTAINER_SHOW_WARNINGS = _IMP_pepdock.IMPCONTAINER_SHOW_WARNINGS
364 IMP_ATOM_HAS_IMP_CGAL = _IMP_pepdock.IMP_ATOM_HAS_IMP_CGAL
365 IMP_ATOM_HAS_IMP_KERNEL = _IMP_pepdock.IMP_ATOM_HAS_IMP_KERNEL
366 IMP_ATOM_HAS_IMP_SCORE_FUNCTOR = _IMP_pepdock.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR
367 IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS
368 IMP_ATOM_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_ATOM_HAS_BOOST_RANDOM
369 IMP_ATOM_HAS_BOOST_REGEX = _IMP_pepdock.IMP_ATOM_HAS_BOOST_REGEX
370 IMP_ATOM_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_ATOM_HAS_BOOST_SYSTEM
371 IMP_ATOM_HAS_CGAL = _IMP_pepdock.IMP_ATOM_HAS_CGAL
372 IMP_ATOM_HAS_HDF5 = _IMP_pepdock.IMP_ATOM_HAS_HDF5
373 IMP_ATOM_HAS_NUMPY = _IMP_pepdock.IMP_ATOM_HAS_NUMPY
374 IMP_ATOM_HAS_PYTHON_IHM = _IMP_pepdock.IMP_ATOM_HAS_PYTHON_IHM
375 IMPATOM_SHOW_WARNINGS = _IMP_pepdock.IMPATOM_SHOW_WARNINGS
376 IMP_ATOM_TYPE_INDEX = _IMP_pepdock.IMP_ATOM_TYPE_INDEX
377 IMP_RESIDUE_TYPE_INDEX = _IMP_pepdock.IMP_RESIDUE_TYPE_INDEX
378 IMP_HIERARCHY_TYPE_INDEX = _IMP_pepdock.IMP_HIERARCHY_TYPE_INDEX
379 IMP_CHAIN_TYPE_INDEX = _IMP_pepdock.IMP_CHAIN_TYPE_INDEX
381 IMP_RMF_HAS_IMP_CGAL = _IMP_pepdock.IMP_RMF_HAS_IMP_CGAL
382 IMP_RMF_HAS_IMP_SCORE_FUNCTOR = _IMP_pepdock.IMP_RMF_HAS_IMP_SCORE_FUNCTOR
383 IMP_RMF_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_RMF_HAS_BOOST_FILESYSTEM
384 IMP_RMF_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_RMF_HAS_BOOST_PROGRAMOPTIONS
385 IMP_RMF_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_RMF_HAS_BOOST_RANDOM
386 IMP_RMF_HAS_BOOST_REGEX = _IMP_pepdock.IMP_RMF_HAS_BOOST_REGEX
387 IMP_RMF_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_RMF_HAS_BOOST_SYSTEM
388 IMP_RMF_HAS_CGAL = _IMP_pepdock.IMP_RMF_HAS_CGAL
389 IMP_RMF_HAS_HDF5 = _IMP_pepdock.IMP_RMF_HAS_HDF5
390 IMP_RMF_HAS_NUMPY = _IMP_pepdock.IMP_RMF_HAS_NUMPY
391 IMP_RMF_HAS_PYTHON_IHM = _IMP_pepdock.IMP_RMF_HAS_PYTHON_IHM
392 IMPRMF_SHOW_WARNINGS = _IMP_pepdock.IMPRMF_SHOW_WARNINGS
395 IMP_DOMINO_HAS_IMP_ATOM = _IMP_pepdock.IMP_DOMINO_HAS_IMP_ATOM
396 IMP_DOMINO_HAS_IMP_CGAL = _IMP_pepdock.IMP_DOMINO_HAS_IMP_CGAL
397 IMP_DOMINO_HAS_IMP_KERNEL = _IMP_pepdock.IMP_DOMINO_HAS_IMP_KERNEL
398 IMP_DOMINO_HAS_IMP_RMF = _IMP_pepdock.IMP_DOMINO_HAS_IMP_RMF
399 IMP_DOMINO_HAS_IMP_SCORE_FUNCTOR = _IMP_pepdock.IMP_DOMINO_HAS_IMP_SCORE_FUNCTOR
400 IMP_DOMINO_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_DOMINO_HAS_BOOST_FILESYSTEM
401 IMP_DOMINO_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_DOMINO_HAS_BOOST_PROGRAMOPTIONS
402 IMP_DOMINO_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_DOMINO_HAS_BOOST_RANDOM
403 IMP_DOMINO_HAS_BOOST_REGEX = _IMP_pepdock.IMP_DOMINO_HAS_BOOST_REGEX
404 IMP_DOMINO_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_DOMINO_HAS_BOOST_SYSTEM
405 IMP_DOMINO_HAS_CGAL = _IMP_pepdock.IMP_DOMINO_HAS_CGAL
406 IMP_DOMINO_HAS_HDF5 = _IMP_pepdock.IMP_DOMINO_HAS_HDF5
407 IMP_DOMINO_HAS_NUMPY = _IMP_pepdock.IMP_DOMINO_HAS_NUMPY
408 IMP_DOMINO_HAS_RMF = _IMP_pepdock.IMP_DOMINO_HAS_RMF
409 IMP_DOMINO_HAS_PYTHON_IHM = _IMP_pepdock.IMP_DOMINO_HAS_PYTHON_IHM
410 IMPDOMINO_SHOW_WARNINGS = _IMP_pepdock.IMPDOMINO_SHOW_WARNINGS
413 IMP_PEPDOCK_HAS_IMP_ALGEBRA = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_ALGEBRA
414 IMP_PEPDOCK_HAS_IMP_ATOM = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_ATOM
415 IMP_PEPDOCK_HAS_IMP_CGAL = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_CGAL
416 IMP_PEPDOCK_HAS_IMP_DISPLAY = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_DISPLAY
417 IMP_PEPDOCK_HAS_IMP_KERNEL = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_KERNEL
418 IMP_PEPDOCK_HAS_IMP_RMF = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_RMF
419 IMP_PEPDOCK_HAS_IMP_SCORE_FUNCTOR = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_SCORE_FUNCTOR
420 IMP_PEPDOCK_HAS_IMP_STATISTICS = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_STATISTICS
421 IMP_PEPDOCK_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_FILESYSTEM
422 IMP_PEPDOCK_HAS_BOOST_GRAPH = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_GRAPH
423 IMP_PEPDOCK_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_PROGRAMOPTIONS
424 IMP_PEPDOCK_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_RANDOM
425 IMP_PEPDOCK_HAS_BOOST_REGEX = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_REGEX
426 IMP_PEPDOCK_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_SYSTEM
427 IMP_PEPDOCK_HAS_CGAL = _IMP_pepdock.IMP_PEPDOCK_HAS_CGAL
428 IMP_PEPDOCK_HAS_HDF5 = _IMP_pepdock.IMP_PEPDOCK_HAS_HDF5
429 IMP_PEPDOCK_HAS_NUMPY = _IMP_pepdock.IMP_PEPDOCK_HAS_NUMPY
430 IMP_PEPDOCK_HAS_RMF = _IMP_pepdock.IMP_PEPDOCK_HAS_RMF
431 IMP_PEPDOCK_HAS_PYTHON_IHM = _IMP_pepdock.IMP_PEPDOCK_HAS_PYTHON_IHM
432 IMPPEPDOCK_SHOW_WARNINGS = _IMP_pepdock.IMPPEPDOCK_SHOW_WARNINGS
434 def get_module_version():
435 """get_module_version() -> std::string const"""
436 return _IMP_pepdock.get_module_version()
439 """get_example_path(std::string fname) -> std::string"""
440 return _IMP_pepdock.get_example_path(fname)
443 """get_data_path(std::string fname) -> std::string"""
444 return _IMP_pepdock.get_data_path(fname)
446 from .
import _version_check
447 _version_check.check_version(get_module_version())
448 __version__ = get_module_version()
std::string get_data_path(std::string file_name)
Return the full path to one of this module's data files.
Various classes to hold sets of particles.
Make CGAL functionality available to IMP.
Composable functors to implement scores via compile-time composition.
Code to compute statistical measures.
std::string get_example_path(std::string file_name)
Return the full path to one of this module's example files.
Basic functionality that is expected to be used by a wide variety of IMP users.
General purpose algebraic and geometric methods that are expected to be used by a wide variety of IMP...
Output IMP model data in various file formats.
Functionality for loading, creating, manipulating and scoring atomic structures.
Support for the RMF file format for storing hierarchical molecular data and markup.
Divide-and-conquer inferential optimization in discrete space.