IMP logo
IMP Reference Guide  2.12.0
The Integrative Modeling Platform
IMP::npctransport::BipartitePairsStatisticsOptimizerState Member List

This is the complete list of members for IMP::npctransport::BipartitePairsStatisticsOptimizerState, including all inherited members.

BipartitePairsStatisticsOptimizerState(IMP::npctransport::Statistics *statistics_manager, InteractionType interaction_type, const ParticlesTemp &particlesI, const ParticlesTemp &particlesII, double contact_range=1.0, double slack=1.0)IMP::npctransport::BipartitePairsStatisticsOptimizerState
clear_caches()IMP::Objectvirtual
do_destroy()IMP::Objectprotectedvirtual
do_get_inputs() const IMP::OptimizerStateprotectedvirtual
do_get_interactions() const IMP::ModelObjectprotectedvirtual
do_get_outputs() const IMP::OptimizerStateprotectedvirtual
do_set_is_optimizing(bool) (defined in IMP::OptimizerState)IMP::OptimizerStateprotectedvirtual
do_update(unsigned int call_num)IMP::npctransport::BipartitePairsStatisticsOptimizerStateprotectedvirtual
get_average_fraction_bound_particle_sites_I() const IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_average_fraction_bound_particle_sites_II() const IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_average_fraction_bound_particles_I() const IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_average_fraction_bound_particles_II() const IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_average_fraction_nonspecific_interactions_I() const IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_average_fraction_nonspecific_interactions_II() const IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_average_number_of_contacts() const IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_average_off_per_bound_I_per_ns() const IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_average_off_per_bound_II_per_ns() const IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_average_off_per_contact_per_ns() const IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_average_on_per_missing_contact_per_ns() const IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_average_on_per_unbound_I_per_ns() const IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_average_on_per_unbound_II_per_ns() const IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_check_level() const (defined in IMP::Object)IMP::Object
get_has_dependencies() const IMP::ModelObject
get_has_required_score_states() const IMP::ModelObject
get_inputs() const IMP::ModelObject
get_interaction_type() const IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_interactions() const IMP::ModelObject
get_log_level() const (defined in IMP::Object)IMP::Object
get_misc_stats_period_ns() const (defined in IMP::npctransport::BipartitePairsStatisticsOptimizerState)IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_model() const (defined in IMP::ModelObject)IMP::ModelObject
get_name() const (defined in IMP::Object)IMP::Object
get_number_of_particles_1()IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_number_of_particles_2()IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_number_of_updates() const IMP::OptimizerState
get_off_I_stats_period_ns() const (defined in IMP::npctransport::BipartitePairsStatisticsOptimizerState)IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_off_II_stats_period_ns() const (defined in IMP::npctransport::BipartitePairsStatisticsOptimizerState)IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_off_stats_period_ns() const (defined in IMP::npctransport::BipartitePairsStatisticsOptimizerState)IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_on_I_stats_period_ns() const (defined in IMP::npctransport::BipartitePairsStatisticsOptimizerState)IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_on_II_stats_period_ns() const (defined in IMP::npctransport::BipartitePairsStatisticsOptimizerState)IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_on_stats_period_ns() const (defined in IMP::npctransport::BipartitePairsStatisticsOptimizerState)IMP::npctransport::BipartitePairsStatisticsOptimizerState
get_optimizer() const (defined in IMP::OptimizerState)IMP::OptimizerState
get_outputs() const IMP::ModelObject
get_period() const IMP::OptimizerState
get_required_score_states() const IMP::ModelObject
get_type_name() const IMP::npctransport::BipartitePairsStatisticsOptimizerStatevirtual
get_version_info() const IMP::npctransport::BipartitePairsStatisticsOptimizerStatevirtual
handle_set_has_required_score_states(bool)IMP::ModelObjectprotectedvirtual
ModelObject(Model *m, std::string name) (defined in IMP::ModelObject)IMP::ModelObject
NonCopyable() (defined in IMP::NonCopyable)IMP::NonCopyableprotected
Object(std::string name)IMP::Objectprotected
OptimizerState(Model *m, std::string name)IMP::OptimizerState
reset()IMP::npctransport::BipartitePairsStatisticsOptimizerStatevirtual
set_check_level(CheckLevel l)IMP::Object
set_has_dependencies(bool tf)IMP::ModelObject
set_has_required_score_states(bool tf)IMP::ModelObject
set_is_optimizing(bool)IMP::OptimizerStatevirtual
set_log_level(LogLevel l)IMP::Object
set_name(std::string name) (defined in IMP::Object)IMP::Object
set_number_of_updates(unsigned int n)IMP::OptimizerState
set_period(unsigned int p)IMP::OptimizerState
set_was_used(bool tf) const IMP::Object
show(std::ostream &out=std::cout) const (defined in IMP::Object)IMP::Object
update()IMP::OptimizerStatevirtual
update_always()IMP::OptimizerState
~BipartitePairsStatisticsOptimizerState() (defined in IMP::npctransport::BipartitePairsStatisticsOptimizerState)IMP::npctransport::BipartitePairsStatisticsOptimizerStateprotectedvirtual
~ModelObject() (defined in IMP::ModelObject)IMP::ModelObject
~Object() (defined in IMP::Object)IMP::Objectvirtual