spb_representation.h File Reference

SPB Representation. More...

#include <IMP.h>
#include <IMP/atom.h>
#include <IMP/core.h>
#include "spb_config.h"

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Namespaces
	IMP
	Base functionality and abstract base classes for representation, scoring and sampling.
	IMP::spb
	Classes, functions and executables for modeling of the Spindle Pole Body.

Functions
atom::Molecules	IMP::spb::create_coiled_coil (Model *m, std::string name, std::string filename_A, std::string filename_B, int nbeads, display::Color colore, int copy, algebra::Vector3D x0, int offset=0)
atom::Molecule	IMP::spb::create_GFP (Model *m, std::string name, int copy, container::ListSingletonContainer *lsc, algebra::Vector3D x0, core::MonteCarloMovers &mvs, spb::SPBParameters mydata, Particle *SideXY, Particle *SideZ)
atom::Molecule	IMP::spb::create_merged_protein (Model *m, RestraintSet *allrs, std::string name, atom::Molecules proteins, int copy, double kappa, double dist=-1.0)
atom::Molecule	IMP::spb::create_protein (Model *m, RestraintSet *allrs, std::string name, double mass, int nbeads, display::Color color, int copy, double kappa, algebra::Vector3D x0, bool use_connectivity, int start_residue=1, int length=-1)
atom::Molecule	IMP::spb::create_protein (Model *m, std::string name, std::string filename, int nbeads, display::Color colore, int copy, algebra::Vector3D x0, int offset=0, bool makerigid=true)
atom::Hierarchies	IMP::spb::create_representation (Model *m, RestraintSet *allrs, spb::SPBParameters mydata, container::ListSingletonContainer *CP_ps, container::ListSingletonContainer *IL2_ps, core::MonteCarloMovers &mvs, Particle *SideXY, Particle *SideZ, int iseed)
void	IMP::spb::load_restart (atom::Hierarchies &all_mol, spb::SPBParameters mydata)
void	IMP::spb::recenter_rb (core::RigidBody &rb, core::XYZRs &rbps, algebra::Vector3D x0, bool coiledcoil=false)

Detailed Description

SPB Representation.

Copyright 2007-2018 IMP Inventors. All rights reserved.

Definition in file spb_representation.h.