home
about
news
download
doc
source
systems
tests
bugs
contact
IMP Reference Guide
2.10.0
The Integrative Modeling Platform
IMP Manual
Reference Guide
Tutorial Index
Modules
Classes
Examples
Class List
Class Index
Class Hierarchy
Class Members
IMP
core
MonteCarlo
IMP::core::MonteCarlo Member List
This is the complete list of members for
IMP::core::MonteCarlo
, including all inherited members.
add_mover
(MonteCarloMover *obj) (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
add_movers
(const MonteCarloMovers &objs) (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
add_optimizer_state
(OptimizerState *obj) (defined in
IMP::Optimizer
)
IMP::Optimizer
add_optimizer_states
(const OptimizerStates &objs) (defined in
IMP::Optimizer
)
IMP::Optimizer
clear_caches
()
IMP::Object
virtual
clear_movers
() (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
clear_optimizer_states
() (defined in
IMP::Optimizer
)
IMP::Optimizer
do_accept_or_reject_move
(double score, double last, double proposal_ratio)
IMP::core::MonteCarlo
protected
do_accept_or_reject_move
(double score, double proposal_ratio) (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
protected
do_destroy
()
IMP::Object
protected
virtual
do_evaluate
(const ParticleIndexes &moved) const
IMP::core::MonteCarlo
protected
virtual
do_get_inputs
() const
IMP::Optimizer
protected
virtual
do_get_interactions
() const
IMP::ModelObject
protected
virtual
do_get_outputs
() const
IMP::Optimizer
protected
virtual
do_move
() (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
protected
do_optimize
(unsigned int max_steps)
IMP::core::MonteCarlo
protected
virtual
do_step
()
IMP::core::MonteCarlo
protected
virtual
get_best_accepted_energy
() const
IMP::core::MonteCarlo
get_check_level
() const (defined in
IMP::Object
)
IMP::Object
get_has_dependencies
() const
IMP::ModelObject
get_has_movers
() (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
get_has_optimizer_states
() (defined in
IMP::Optimizer
)
IMP::Optimizer
get_has_required_score_states
() const
IMP::ModelObject
get_incremental_scoring_function
() const (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
get_inputs
() const
IMP::ModelObject
get_interactions
() const
IMP::ModelObject
get_kt
() const (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
get_last_accepted_energy
() const
IMP::core::MonteCarlo
get_last_score
() const
IMP::Optimizer
get_log_level
() const (defined in
IMP::Object
)
IMP::Object
get_maximum_difference
() const (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
get_model
() const (defined in
IMP::ModelObject
)
IMP::ModelObject
get_movable_particles
() const
IMP::core::MonteCarlo
protected
get_mover
(unsigned int i) const (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
get_movers
() const (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
get_name
() const (defined in
IMP::Object
)
IMP::Object
get_number_of_accepted_steps
() const
IMP::core::MonteCarlo
get_number_of_downward_steps
() const
IMP::core::MonteCarlo
get_number_of_movers
() const (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
get_number_of_optimizer_states
() const (defined in
IMP::Optimizer
)
IMP::Optimizer
get_number_of_proposed_steps
() const
IMP::core::MonteCarlo
get_number_of_upward_steps
() const
IMP::core::MonteCarlo
get_optimizer_state
(unsigned int i) const (defined in
IMP::Optimizer
)
IMP::Optimizer
get_optimizer_state_inputs
() const (defined in
IMP::Optimizer
)
IMP::Optimizer
protected
get_optimizer_states
() const (defined in
IMP::Optimizer
)
IMP::Optimizer
get_outputs
() const
IMP::ModelObject
get_required_score_states
() const
IMP::ModelObject
get_score_threshold
() const
IMP::core::MonteCarlo
get_scoring_function
() const
IMP::Optimizer
get_stop_on_good_score
() const (defined in
IMP::Optimizer
)
IMP::Optimizer
get_type_name
() const (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
virtual
get_use_incremental_scoring_function
() const (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
get_version_info
() const
IMP::core::MonteCarlo
virtual
handle_set_has_required_score_states
(bool)
IMP::ModelObject
protected
virtual
ModelObject
(Model *m, std::string name) (defined in
IMP::ModelObject
)
IMP::ModelObject
MonteCarlo
(Model *m) (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
NonCopyable
() (defined in
IMP::NonCopyable
)
IMP::NonCopyable
protected
Object
(std::string name)
IMP::Object
protected
optimize
(unsigned int max_steps)
IMP::Optimizer
Optimizer
(Model *m, std::string name="Optimizer %1%") (defined in
IMP::Optimizer
)
IMP::Optimizer
remove_mover
(MonteCarloMover *d) (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
remove_movers
(const MonteCarloMovers &d) (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
remove_optimizer_state
(OptimizerState *d) (defined in
IMP::Optimizer
)
IMP::Optimizer
remove_optimizer_states
(const OptimizerStates &d) (defined in
IMP::Optimizer
)
IMP::Optimizer
reserve_movers
(unsigned int sz) (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
reserve_optimizer_states
(unsigned int sz) (defined in
IMP::Optimizer
)
IMP::Optimizer
reset_statistics
() (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
set_check_level
(CheckLevel l)
IMP::Object
set_has_dependencies
(bool tf)
IMP::ModelObject
set_has_required_score_states
(bool tf)
IMP::ModelObject
set_incremental_scoring_function
(IncrementalScoringFunction *isf)
IMP::core::MonteCarlo
set_kt
(Float t) (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
set_log_level
(LogLevel l)
IMP::Object
set_maximum_difference
(double d)
IMP::core::MonteCarlo
set_movers
(const MonteCarloMovers &ps) (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
set_movers_order
(const MonteCarloMovers &objs) (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
set_name
(std::string name) (defined in
IMP::Object
)
IMP::Object
set_optimizer_states
(const OptimizerStates &ps) (defined in
IMP::Optimizer
)
IMP::Optimizer
set_optimizer_states_order
(const OptimizerStates &objs) (defined in
IMP::Optimizer
)
IMP::Optimizer
set_return_best
(bool tf)
IMP::core::MonteCarlo
set_score_threshold
(double s)
IMP::core::MonteCarlo
set_scoring_function
(ScoringFunctionAdaptor sf)
IMP::Optimizer
virtual
set_stop_on_good_score
(bool tf)
IMP::Optimizer
set_was_used
(bool tf) const
IMP::Object
show
(std::ostream &out=std::cout) const (defined in
IMP::Object
)
IMP::Object
update_states
() const
IMP::Optimizer
protected
~ModelObject
() (defined in
IMP::ModelObject
)
IMP::ModelObject
~MonteCarlo
() (defined in
IMP::core::MonteCarlo
)
IMP::core::MonteCarlo
protected
virtual
~Object
() (defined in
IMP::Object
)
IMP::Object
virtual