IMP::atom::WritePDBOptimizerState Class Reference

#include <IMP/atom/pdb.h>

Inheritance diagram for IMP::atom::WritePDBOptimizerState:

Public Member Functions
	WritePDBOptimizerState (const atom::Hierarchies &mh, std::string file_name)
void	set_period (unsigned int p)
void	write (std::string file_name, unsigned int call=0, bool append=false) const
Public Member Functions inherited from IMP::kernel::OptimizerState
	OptimizerState (std::string name="OptimizerState %1%")
Optimizer *	get_optimizer () const
virtual void	set_is_optimizing (bool)
virtual void	update ()=0
	Called when the Optimizer accepts a new conformation.
Public Member Functions inherited from IMP::base::Object
virtual void	clear_caches ()
virtual IMP::base::VersionInfo	get_version_info () const =0
	Get information about the module and version of the object.
void	set_check_level (CheckLevel l)
void	set_log_level (LogLevel l)
	Set the logging level used in this object. More...
void	set_was_used (bool tf) const
void	show (std::ostream &out=std::cout) const
const std::string &	get_name () const
void	set_name (std::string name)

Related Functions
(Note that these are not member functions.)
typedef IMP::base::Vector < IMP::base::WeakPointer < WritePDBOptimizerState > >	WritePDBOptimizerStatesTemp
Related Functions inherited from IMP::kernel::OptimizerState
typedef IMP::base::Vector < IMP::base::WeakPointer < OptimizerState > >	OptimizerStatesTemp
Related Functions inherited from IMP::base::Object
typedef IMP::base::Vector < IMP::base::WeakPointer < Object > >	ObjectsTemp

Additional Inherited Members
Protected Member Functions inherited from IMP::base::Object
	Object (std::string name)
	Construct an object with the given name. More...
Protected Attributes inherited from IMP::kernel::OptimizerState
UncheckedWeakPointer< Optimizer >	optimizer_

Detailed Description

This writes a PDB file at the specified interval during optimization. If the file name contains %1% then a new file is written each time with the %1% replaced by the index. Otherwise a new model is written each time to the same file.

Definition at line 443 of file pdb.h.

Constructor & Destructor Documentation

IMP::atom::WritePDBOptimizerState::WritePDBOptimizerState	(	const atom::Hierarchies &	mh,
		std::string	file_name
	)

Write to a file generated from the passed filename every skip_steps steps. The file_name constructor argument should contain "%1%" if you don't want to write the same file each time.

Definition at line 443 of file pdb.h.

Friends And Related Function Documentation

typedef IMP::base::Vector<IMP::base::WeakPointer< WritePDBOptimizerState > > WritePDBOptimizerStatesTemp

related

Pass a set of objects.

Definition at line 443 of file pdb.h.

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The documentation for this class was generated from the following file:

• pdb.h