[IMP-users] Re: How to use zip PDBs with IMP-FOXS (such as with the online version of FOXS)
To:
Subject: [IMP-users] Re: How to use zip PDBs with IMP-FOXS (such as with the online version of FOXS)
From: Ben Webb <>
Date: Thu, 19 Jan 2023 13:20:22 -0800
On 1/19/23 11:06 AM, sammahdi1994--- via IMP-users wrote:
> I am attempting to run FOXS with 200+ PDBs. For this purpose I have
> downloaded IMP since the online version of FOXS can only use 100PDBs.
> However, I don't see an option in the tutorial or the help command for
> uploading a zip containing multiple PDBs.
It's a command line tool - there's no reason for it to handle zip files
since you can already do that (with other command line tools). FoXS can
handle any number of PDBs and/or profiles on the command line, so just
unzip your file first and then give FoXS as many of the PDBs as you want.
Ben
--
https://salilab.org/~ben/
"It is a capital mistake to theorize before one has data."
- Sir Arthur Conan Doyle