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Re: [IMP-users] compilation bus error



I would recommend updating to svn head (check out svn.salilab.org/imp/trunk). We probably should remove mentions of the stable branch from the manual (or figure out a better scheme for updating it).
   --Daniel




On Jan 21, 2011, at 10:51 AM, Robert Brynmor Fenwick wrote:


OK, I have managed to get the code to compile by removing the use of the cgal, I have however found another error that seems to be a problem with the saxs module:

Traceback (most recent call last):
  File "foxs_sax_fitting_6.py", line 39, in <module>
    IMP.core.XYZR(particles[i]).set_radius(radius)
  File "/Users/fenwick/opt/imp_stable/lib/python2.5/site-packages/IMP/core/__init__.py", line 579, in set_radius
    def set_radius(self, *args): return _IMP_core.XYZR_set_radius(self, *args)
_IMP.UsageException: Cannot set value "radius" from particle Atom N as it is not there.


On 21 January 2011 18:40, Ben Webb <">> wrote:
On 1/21/11 9:35 AM, Daniel Russel wrote:
> My guess is that you checked things in between my checking in patches
> last night and found IMP in an inconsistent state.

No, this is the stable branch. It's from the last time the nightly build
succeeded, which was in late October. It won't be in an inconsistent state.

       Ben
--
">                      http://salilab.org/~ben/
"It is a capital mistake to theorize before one has data."
       - Sir Arthur Conan Doyle
_______________________________________________



--
R. Bryn Fenwick
">
Post-doctoral fellow
Chemistry and Molecular Pharmacology Programme
Institute for Research in Biomedicine (IRB Barcelona)
Parc Científic de Barcelona
Baldiri Reixac 10, 08028 Barcelona, SPAIN
Tel. (+34) 9340 20460
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