10 from __future__
import print_function, division, absolute_import
15 from sys
import version_info
16 if version_info >= (2, 6, 0):
17 def swig_import_helper():
18 from os.path
import dirname
22 fp, pathname, description = imp.find_module(
'_IMP_pepdock', [dirname(__file__)])
28 _mod = imp.load_module(
'_IMP_pepdock', fp, pathname, description)
32 _IMP_pepdock = swig_import_helper()
33 del swig_import_helper
38 _swig_property = property
43 def _swig_setattr_nondynamic(self, class_type, name, value, static=1):
44 if (name ==
"thisown"):
45 return self.this.own(value)
47 if type(value).__name__ ==
'SwigPyObject':
48 self.__dict__[name] = value
50 method = class_type.__swig_setmethods__.get(name,
None)
52 return method(self, value)
54 object.__setattr__(self, name, value)
56 raise AttributeError(
"You cannot add attributes to %s" % self)
59 def _swig_setattr(self, class_type, name, value):
60 return _swig_setattr_nondynamic(self, class_type, name, value, 0)
63 def _swig_getattr_nondynamic(self, class_type, name, static=1):
64 if (name ==
"thisown"):
65 return self.this.own()
66 method = class_type.__swig_getmethods__.get(name,
None)
70 return object.__getattr__(self, name)
72 raise AttributeError(name)
74 def _swig_getattr(self, class_type, name):
75 return _swig_getattr_nondynamic(self, class_type, name, 0)
80 strthis =
"proxy of " + self.this.__repr__()
83 return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
88 except AttributeError:
95 def _swig_setattr_nondynamic_method(set):
96 def set_attr(self, name, value):
97 if (name ==
"thisown"):
98 return self.this.own(value)
99 if hasattr(self, name)
or (name ==
"this"):
100 set(self, name, value)
102 raise AttributeError(
"You cannot add attributes to %s" % self)
108 weakref_proxy = weakref.proxy
110 weakref_proxy =
lambda x: x
113 class IMP_PEPDOCK_SwigPyIterator(object):
114 """Proxy of C++ swig::IMP_PEPDOCK_SwigPyIterator class."""
116 thisown = _swig_property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
'The membership flag')
118 def __init__(self, *args, **kwargs):
119 raise AttributeError(
"No constructor defined - class is abstract")
120 __repr__ = _swig_repr
121 __swig_destroy__ = _IMP_pepdock.delete_IMP_PEPDOCK_SwigPyIterator
122 __del__ =
lambda self:
None
125 """value(IMP_PEPDOCK_SwigPyIterator self) -> PyObject *"""
126 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_value(self)
131 incr(IMP_PEPDOCK_SwigPyIterator self, size_t n=1) -> IMP_PEPDOCK_SwigPyIterator
132 incr(IMP_PEPDOCK_SwigPyIterator self) -> IMP_PEPDOCK_SwigPyIterator
134 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_incr(self, n)
139 decr(IMP_PEPDOCK_SwigPyIterator self, size_t n=1) -> IMP_PEPDOCK_SwigPyIterator
140 decr(IMP_PEPDOCK_SwigPyIterator self) -> IMP_PEPDOCK_SwigPyIterator
142 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_decr(self, n)
145 def distance(self, x):
146 """distance(IMP_PEPDOCK_SwigPyIterator self, IMP_PEPDOCK_SwigPyIterator x) -> ptrdiff_t"""
147 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_distance(self, x)
151 """equal(IMP_PEPDOCK_SwigPyIterator self, IMP_PEPDOCK_SwigPyIterator x) -> bool"""
152 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_equal(self, x)
156 """copy(IMP_PEPDOCK_SwigPyIterator self) -> IMP_PEPDOCK_SwigPyIterator"""
157 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_copy(self)
161 """next(IMP_PEPDOCK_SwigPyIterator self) -> PyObject *"""
162 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_next(self)
166 """__next__(IMP_PEPDOCK_SwigPyIterator self) -> PyObject *"""
167 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___next__(self)
171 """previous(IMP_PEPDOCK_SwigPyIterator self) -> PyObject *"""
172 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_previous(self)
175 def advance(self, n):
176 """advance(IMP_PEPDOCK_SwigPyIterator self, ptrdiff_t n) -> IMP_PEPDOCK_SwigPyIterator"""
177 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_advance(self, n)
181 """__eq__(IMP_PEPDOCK_SwigPyIterator self, IMP_PEPDOCK_SwigPyIterator x) -> bool"""
182 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___eq__(self, x)
186 """__ne__(IMP_PEPDOCK_SwigPyIterator self, IMP_PEPDOCK_SwigPyIterator x) -> bool"""
187 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___ne__(self, x)
190 def __iadd__(self, n):
191 """__iadd__(IMP_PEPDOCK_SwigPyIterator self, ptrdiff_t n) -> IMP_PEPDOCK_SwigPyIterator"""
192 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___iadd__(self, n)
195 def __isub__(self, n):
196 """__isub__(IMP_PEPDOCK_SwigPyIterator self, ptrdiff_t n) -> IMP_PEPDOCK_SwigPyIterator"""
197 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___isub__(self, n)
200 def __add__(self, n):
201 """__add__(IMP_PEPDOCK_SwigPyIterator self, ptrdiff_t n) -> IMP_PEPDOCK_SwigPyIterator"""
202 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___add__(self, n)
205 def __sub__(self, *args):
207 __sub__(IMP_PEPDOCK_SwigPyIterator self, ptrdiff_t n) -> IMP_PEPDOCK_SwigPyIterator
208 __sub__(IMP_PEPDOCK_SwigPyIterator self, IMP_PEPDOCK_SwigPyIterator x) -> ptrdiff_t
210 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___sub__(self, *args)
214 IMP_PEPDOCK_SwigPyIterator_swigregister = _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_swigregister
215 IMP_PEPDOCK_SwigPyIterator_swigregister(IMP_PEPDOCK_SwigPyIterator)
224 _IMP_pepdock.IMP_DEBUG_swigconstant(_IMP_pepdock)
225 IMP_DEBUG = _IMP_pepdock.IMP_DEBUG
227 _IMP_pepdock.IMP_RELEASE_swigconstant(_IMP_pepdock)
228 IMP_RELEASE = _IMP_pepdock.IMP_RELEASE
230 _IMP_pepdock.IMP_SILENT_swigconstant(_IMP_pepdock)
231 IMP_SILENT = _IMP_pepdock.IMP_SILENT
233 _IMP_pepdock.IMP_PROGRESS_swigconstant(_IMP_pepdock)
234 IMP_PROGRESS = _IMP_pepdock.IMP_PROGRESS
236 _IMP_pepdock.IMP_TERSE_swigconstant(_IMP_pepdock)
237 IMP_TERSE = _IMP_pepdock.IMP_TERSE
239 _IMP_pepdock.IMP_VERBOSE_swigconstant(_IMP_pepdock)
240 IMP_VERBOSE = _IMP_pepdock.IMP_VERBOSE
242 _IMP_pepdock.IMP_MEMORY_swigconstant(_IMP_pepdock)
243 IMP_MEMORY = _IMP_pepdock.IMP_MEMORY
245 _IMP_pepdock.IMP_NONE_swigconstant(_IMP_pepdock)
246 IMP_NONE = _IMP_pepdock.IMP_NONE
248 _IMP_pepdock.IMP_USAGE_swigconstant(_IMP_pepdock)
249 IMP_USAGE = _IMP_pepdock.IMP_USAGE
251 _IMP_pepdock.IMP_INTERNAL_swigconstant(_IMP_pepdock)
252 IMP_INTERNAL = _IMP_pepdock.IMP_INTERNAL
254 _IMP_pepdock.IMP_KERNEL_HAS_LOG4CXX_swigconstant(_IMP_pepdock)
255 IMP_KERNEL_HAS_LOG4CXX = _IMP_pepdock.IMP_KERNEL_HAS_LOG4CXX
257 _IMP_pepdock.IMP_COMPILER_HAS_AUTO_swigconstant(_IMP_pepdock)
258 IMP_COMPILER_HAS_AUTO = _IMP_pepdock.IMP_COMPILER_HAS_AUTO
260 _IMP_pepdock.IMP_COMPILER_HAS_DEBUG_VECTOR_swigconstant(_IMP_pepdock)
261 IMP_COMPILER_HAS_DEBUG_VECTOR = _IMP_pepdock.IMP_COMPILER_HAS_DEBUG_VECTOR
263 _IMP_pepdock.IMP_COMPILER_HAS_UNIQUE_PTR_swigconstant(_IMP_pepdock)
264 IMP_COMPILER_HAS_UNIQUE_PTR = _IMP_pepdock.IMP_COMPILER_HAS_UNIQUE_PTR
266 _IMP_pepdock.IMP_KERNEL_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
267 IMP_KERNEL_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_KERNEL_HAS_BOOST_RANDOM
269 _IMP_pepdock.IMP_KERNEL_HAS_GPERFTOOLS_swigconstant(_IMP_pepdock)
270 IMP_KERNEL_HAS_GPERFTOOLS = _IMP_pepdock.IMP_KERNEL_HAS_GPERFTOOLS
272 _IMP_pepdock.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER_swigconstant(_IMP_pepdock)
273 IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER = _IMP_pepdock.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER
275 _IMP_pepdock.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER_swigconstant(_IMP_pepdock)
276 IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER = _IMP_pepdock.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER
278 _IMP_pepdock.IMPKERNEL_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
279 IMPKERNEL_SHOW_WARNINGS = _IMP_pepdock.IMPKERNEL_SHOW_WARNINGS
282 class _DirectorObjects(object):
283 """@internal Simple class to keep references to director objects
284 to prevent premature deletion."""
287 def register(self, obj):
288 """Take a reference to a director object; will only work for
289 refcounted C++ classes"""
290 if hasattr(obj,
'get_ref_count'):
291 self._objects.append(obj)
293 """Only drop our reference and allow cleanup by Python if no other
294 Python references exist (we hold 3 references: one in self._objects,
295 one in x, and one in the argument list for getrefcount) *and* no
296 other C++ references exist (the Python object always holds one)"""
297 objs = [x
for x
in self._objects
if sys.getrefcount(x) > 3 \
298 or x.get_ref_count() > 1]
302 def get_object_count(self):
303 """Get number of director objects (useful for testing only)"""
304 return len(self._objects)
305 _director_objects = _DirectorObjects()
307 class _ostream(object):
308 """Proxy of C++ std::ostream class."""
310 thisown = _swig_property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
'The membership flag')
312 def __init__(self, *args, **kwargs):
313 raise AttributeError(
"No constructor defined")
314 __repr__ = _swig_repr
316 def write(self, osa_buf):
317 """write(_ostream self, char const * osa_buf)"""
318 return _IMP_pepdock._ostream_write(self, osa_buf)
320 _ostream_swigregister = _IMP_pepdock._ostream_swigregister
321 _ostream_swigregister(_ostream)
324 _IMP_pepdock.IMP_COMPILER_HAS_OVERRIDE_swigconstant(_IMP_pepdock)
325 IMP_COMPILER_HAS_OVERRIDE = _IMP_pepdock.IMP_COMPILER_HAS_OVERRIDE
327 _IMP_pepdock.IMP_COMPILER_HAS_FINAL_swigconstant(_IMP_pepdock)
328 IMP_COMPILER_HAS_FINAL = _IMP_pepdock.IMP_COMPILER_HAS_FINAL
330 _IMP_pepdock.IMP_HAS_NOEXCEPT_swigconstant(_IMP_pepdock)
331 IMP_HAS_NOEXCEPT = _IMP_pepdock.IMP_HAS_NOEXCEPT
334 _IMP_pepdock.IMP_CGAL_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
335 IMP_CGAL_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_CGAL_HAS_BOOST_FILESYSTEM
337 _IMP_pepdock.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
338 IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS
340 _IMP_pepdock.IMP_CGAL_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
341 IMP_CGAL_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_CGAL_HAS_BOOST_RANDOM
343 _IMP_pepdock.IMP_CGAL_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
344 IMP_CGAL_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_CGAL_HAS_BOOST_SYSTEM
346 _IMP_pepdock.IMPCGAL_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
347 IMPCGAL_SHOW_WARNINGS = _IMP_pepdock.IMPCGAL_SHOW_WARNINGS
350 _IMP_pepdock.IMP_ALGEBRA_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
351 IMP_ALGEBRA_HAS_IMP_CGAL = _IMP_pepdock.IMP_ALGEBRA_HAS_IMP_CGAL
353 _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
354 IMP_ALGEBRA_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM
356 _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
357 IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS
359 _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
360 IMP_ALGEBRA_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_RANDOM
362 _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
363 IMP_ALGEBRA_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_SYSTEM
365 _IMP_pepdock.IMP_ALGEBRA_HAS_CGAL_swigconstant(_IMP_pepdock)
366 IMP_ALGEBRA_HAS_CGAL = _IMP_pepdock.IMP_ALGEBRA_HAS_CGAL
368 _IMP_pepdock.IMP_ALGEBRA_HAS_ANN_swigconstant(_IMP_pepdock)
369 IMP_ALGEBRA_HAS_ANN = _IMP_pepdock.IMP_ALGEBRA_HAS_ANN
371 _IMP_pepdock.IMPALGEBRA_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
372 IMPALGEBRA_SHOW_WARNINGS = _IMP_pepdock.IMPALGEBRA_SHOW_WARNINGS
375 _IMP_pepdock.IMP_DISPLAY_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
376 IMP_DISPLAY_HAS_IMP_CGAL = _IMP_pepdock.IMP_DISPLAY_HAS_IMP_CGAL
378 _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
379 IMP_DISPLAY_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_FILESYSTEM
381 _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
382 IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS
384 _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
385 IMP_DISPLAY_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_RANDOM
387 _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
388 IMP_DISPLAY_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_SYSTEM
390 _IMP_pepdock.IMP_DISPLAY_HAS_CGAL_swigconstant(_IMP_pepdock)
391 IMP_DISPLAY_HAS_CGAL = _IMP_pepdock.IMP_DISPLAY_HAS_CGAL
393 _IMP_pepdock.IMPDISPLAY_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
394 IMPDISPLAY_SHOW_WARNINGS = _IMP_pepdock.IMPDISPLAY_SHOW_WARNINGS
397 _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
398 IMP_SCORE_FUNCTOR_HAS_IMP_CGAL = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL
400 _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
401 IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM
403 _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
404 IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS
406 _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
407 IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM
409 _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
410 IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM
412 _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_CGAL_swigconstant(_IMP_pepdock)
413 IMP_SCORE_FUNCTOR_HAS_CGAL = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_CGAL
415 _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_HDF5_swigconstant(_IMP_pepdock)
416 IMP_SCORE_FUNCTOR_HAS_HDF5 = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_HDF5
418 _IMP_pepdock.IMPSCOREFUNCTOR_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
419 IMPSCOREFUNCTOR_SHOW_WARNINGS = _IMP_pepdock.IMPSCOREFUNCTOR_SHOW_WARNINGS
422 _IMP_pepdock.IMP_STATISTICS_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
423 IMP_STATISTICS_HAS_IMP_CGAL = _IMP_pepdock.IMP_STATISTICS_HAS_IMP_CGAL
425 _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
426 IMP_STATISTICS_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_FILESYSTEM
428 _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
429 IMP_STATISTICS_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_PROGRAMOPTIONS
431 _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
432 IMP_STATISTICS_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_RANDOM
434 _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
435 IMP_STATISTICS_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_SYSTEM
437 _IMP_pepdock.IMP_STATISTICS_HAS_CGAL_swigconstant(_IMP_pepdock)
438 IMP_STATISTICS_HAS_CGAL = _IMP_pepdock.IMP_STATISTICS_HAS_CGAL
440 _IMP_pepdock.IMPSTATISTICS_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
441 IMPSTATISTICS_SHOW_WARNINGS = _IMP_pepdock.IMPSTATISTICS_SHOW_WARNINGS
444 _IMP_pepdock.IMP_CORE_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
445 IMP_CORE_HAS_IMP_CGAL = _IMP_pepdock.IMP_CORE_HAS_IMP_CGAL
447 _IMP_pepdock.IMP_CORE_HAS_IMP_KERNEL_swigconstant(_IMP_pepdock)
448 IMP_CORE_HAS_IMP_KERNEL = _IMP_pepdock.IMP_CORE_HAS_IMP_KERNEL
450 _IMP_pepdock.IMP_CORE_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
451 IMP_CORE_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_CORE_HAS_BOOST_FILESYSTEM
453 _IMP_pepdock.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
454 IMP_CORE_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS
456 _IMP_pepdock.IMP_CORE_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
457 IMP_CORE_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_CORE_HAS_BOOST_RANDOM
459 _IMP_pepdock.IMP_CORE_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
460 IMP_CORE_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_CORE_HAS_BOOST_SYSTEM
462 _IMP_pepdock.IMP_CORE_HAS_CGAL_swigconstant(_IMP_pepdock)
463 IMP_CORE_HAS_CGAL = _IMP_pepdock.IMP_CORE_HAS_CGAL
465 _IMP_pepdock.IMP_CORE_HAS_HDF5_swigconstant(_IMP_pepdock)
466 IMP_CORE_HAS_HDF5 = _IMP_pepdock.IMP_CORE_HAS_HDF5
468 _IMP_pepdock.IMPCORE_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
469 IMPCORE_SHOW_WARNINGS = _IMP_pepdock.IMPCORE_SHOW_WARNINGS
472 _IMP_pepdock.IMP_CONTAINER_HAS_IMP_ALGEBRA_swigconstant(_IMP_pepdock)
473 IMP_CONTAINER_HAS_IMP_ALGEBRA = _IMP_pepdock.IMP_CONTAINER_HAS_IMP_ALGEBRA
475 _IMP_pepdock.IMP_CONTAINER_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
476 IMP_CONTAINER_HAS_IMP_CGAL = _IMP_pepdock.IMP_CONTAINER_HAS_IMP_CGAL
478 _IMP_pepdock.IMP_CONTAINER_HAS_IMP_DISPLAY_swigconstant(_IMP_pepdock)
479 IMP_CONTAINER_HAS_IMP_DISPLAY = _IMP_pepdock.IMP_CONTAINER_HAS_IMP_DISPLAY
481 _IMP_pepdock.IMP_CONTAINER_HAS_IMP_KERNEL_swigconstant(_IMP_pepdock)
482 IMP_CONTAINER_HAS_IMP_KERNEL = _IMP_pepdock.IMP_CONTAINER_HAS_IMP_KERNEL
484 _IMP_pepdock.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_pepdock)
485 IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR = _IMP_pepdock.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR
487 _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
488 IMP_CONTAINER_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_FILESYSTEM
490 _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
491 IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS
493 _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
494 IMP_CONTAINER_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_RANDOM
496 _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
497 IMP_CONTAINER_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_SYSTEM
499 _IMP_pepdock.IMP_CONTAINER_HAS_CGAL_swigconstant(_IMP_pepdock)
500 IMP_CONTAINER_HAS_CGAL = _IMP_pepdock.IMP_CONTAINER_HAS_CGAL
502 _IMP_pepdock.IMP_CONTAINER_HAS_HDF5_swigconstant(_IMP_pepdock)
503 IMP_CONTAINER_HAS_HDF5 = _IMP_pepdock.IMP_CONTAINER_HAS_HDF5
505 _IMP_pepdock.IMPCONTAINER_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
506 IMPCONTAINER_SHOW_WARNINGS = _IMP_pepdock.IMPCONTAINER_SHOW_WARNINGS
509 _IMP_pepdock.IMP_ATOM_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
510 IMP_ATOM_HAS_IMP_CGAL = _IMP_pepdock.IMP_ATOM_HAS_IMP_CGAL
512 _IMP_pepdock.IMP_ATOM_HAS_IMP_KERNEL_swigconstant(_IMP_pepdock)
513 IMP_ATOM_HAS_IMP_KERNEL = _IMP_pepdock.IMP_ATOM_HAS_IMP_KERNEL
515 _IMP_pepdock.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_pepdock)
516 IMP_ATOM_HAS_IMP_SCORE_FUNCTOR = _IMP_pepdock.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR
518 _IMP_pepdock.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
519 IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS
521 _IMP_pepdock.IMP_ATOM_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
522 IMP_ATOM_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_ATOM_HAS_BOOST_RANDOM
524 _IMP_pepdock.IMP_ATOM_HAS_BOOST_REGEX_swigconstant(_IMP_pepdock)
525 IMP_ATOM_HAS_BOOST_REGEX = _IMP_pepdock.IMP_ATOM_HAS_BOOST_REGEX
527 _IMP_pepdock.IMP_ATOM_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
528 IMP_ATOM_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_ATOM_HAS_BOOST_SYSTEM
530 _IMP_pepdock.IMP_ATOM_HAS_CGAL_swigconstant(_IMP_pepdock)
531 IMP_ATOM_HAS_CGAL = _IMP_pepdock.IMP_ATOM_HAS_CGAL
533 _IMP_pepdock.IMP_ATOM_HAS_HDF5_swigconstant(_IMP_pepdock)
534 IMP_ATOM_HAS_HDF5 = _IMP_pepdock.IMP_ATOM_HAS_HDF5
536 _IMP_pepdock.IMPATOM_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
537 IMPATOM_SHOW_WARNINGS = _IMP_pepdock.IMPATOM_SHOW_WARNINGS
539 _IMP_pepdock.IMP_ATOM_TYPE_INDEX_swigconstant(_IMP_pepdock)
540 IMP_ATOM_TYPE_INDEX = _IMP_pepdock.IMP_ATOM_TYPE_INDEX
542 _IMP_pepdock.IMP_RESIDUE_TYPE_INDEX_swigconstant(_IMP_pepdock)
543 IMP_RESIDUE_TYPE_INDEX = _IMP_pepdock.IMP_RESIDUE_TYPE_INDEX
545 _IMP_pepdock.IMP_HIERARCHY_TYPE_INDEX_swigconstant(_IMP_pepdock)
546 IMP_HIERARCHY_TYPE_INDEX = _IMP_pepdock.IMP_HIERARCHY_TYPE_INDEX
549 _IMP_pepdock.IMP_RMF_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
550 IMP_RMF_HAS_IMP_CGAL = _IMP_pepdock.IMP_RMF_HAS_IMP_CGAL
552 _IMP_pepdock.IMP_RMF_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_pepdock)
553 IMP_RMF_HAS_IMP_SCORE_FUNCTOR = _IMP_pepdock.IMP_RMF_HAS_IMP_SCORE_FUNCTOR
555 _IMP_pepdock.IMP_RMF_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
556 IMP_RMF_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_RMF_HAS_BOOST_FILESYSTEM
558 _IMP_pepdock.IMP_RMF_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
559 IMP_RMF_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_RMF_HAS_BOOST_PROGRAMOPTIONS
561 _IMP_pepdock.IMP_RMF_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
562 IMP_RMF_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_RMF_HAS_BOOST_RANDOM
564 _IMP_pepdock.IMP_RMF_HAS_BOOST_REGEX_swigconstant(_IMP_pepdock)
565 IMP_RMF_HAS_BOOST_REGEX = _IMP_pepdock.IMP_RMF_HAS_BOOST_REGEX
567 _IMP_pepdock.IMP_RMF_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
568 IMP_RMF_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_RMF_HAS_BOOST_SYSTEM
570 _IMP_pepdock.IMP_RMF_HAS_CGAL_swigconstant(_IMP_pepdock)
571 IMP_RMF_HAS_CGAL = _IMP_pepdock.IMP_RMF_HAS_CGAL
573 _IMP_pepdock.IMP_RMF_HAS_HDF5_swigconstant(_IMP_pepdock)
574 IMP_RMF_HAS_HDF5 = _IMP_pepdock.IMP_RMF_HAS_HDF5
576 _IMP_pepdock.IMPRMF_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
577 IMPRMF_SHOW_WARNINGS = _IMP_pepdock.IMPRMF_SHOW_WARNINGS
581 _IMP_pepdock.IMP_DOMINO_HAS_IMP_ATOM_swigconstant(_IMP_pepdock)
582 IMP_DOMINO_HAS_IMP_ATOM = _IMP_pepdock.IMP_DOMINO_HAS_IMP_ATOM
584 _IMP_pepdock.IMP_DOMINO_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
585 IMP_DOMINO_HAS_IMP_CGAL = _IMP_pepdock.IMP_DOMINO_HAS_IMP_CGAL
587 _IMP_pepdock.IMP_DOMINO_HAS_IMP_KERNEL_swigconstant(_IMP_pepdock)
588 IMP_DOMINO_HAS_IMP_KERNEL = _IMP_pepdock.IMP_DOMINO_HAS_IMP_KERNEL
590 _IMP_pepdock.IMP_DOMINO_HAS_IMP_RMF_swigconstant(_IMP_pepdock)
591 IMP_DOMINO_HAS_IMP_RMF = _IMP_pepdock.IMP_DOMINO_HAS_IMP_RMF
593 _IMP_pepdock.IMP_DOMINO_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_pepdock)
594 IMP_DOMINO_HAS_IMP_SCORE_FUNCTOR = _IMP_pepdock.IMP_DOMINO_HAS_IMP_SCORE_FUNCTOR
596 _IMP_pepdock.IMP_DOMINO_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
597 IMP_DOMINO_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_DOMINO_HAS_BOOST_FILESYSTEM
599 _IMP_pepdock.IMP_DOMINO_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
600 IMP_DOMINO_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_DOMINO_HAS_BOOST_PROGRAMOPTIONS
602 _IMP_pepdock.IMP_DOMINO_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
603 IMP_DOMINO_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_DOMINO_HAS_BOOST_RANDOM
605 _IMP_pepdock.IMP_DOMINO_HAS_BOOST_REGEX_swigconstant(_IMP_pepdock)
606 IMP_DOMINO_HAS_BOOST_REGEX = _IMP_pepdock.IMP_DOMINO_HAS_BOOST_REGEX
608 _IMP_pepdock.IMP_DOMINO_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
609 IMP_DOMINO_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_DOMINO_HAS_BOOST_SYSTEM
611 _IMP_pepdock.IMP_DOMINO_HAS_CGAL_swigconstant(_IMP_pepdock)
612 IMP_DOMINO_HAS_CGAL = _IMP_pepdock.IMP_DOMINO_HAS_CGAL
614 _IMP_pepdock.IMP_DOMINO_HAS_HDF5_swigconstant(_IMP_pepdock)
615 IMP_DOMINO_HAS_HDF5 = _IMP_pepdock.IMP_DOMINO_HAS_HDF5
617 _IMP_pepdock.IMP_DOMINO_HAS_RMF_swigconstant(_IMP_pepdock)
618 IMP_DOMINO_HAS_RMF = _IMP_pepdock.IMP_DOMINO_HAS_RMF
620 _IMP_pepdock.IMPDOMINO_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
621 IMPDOMINO_SHOW_WARNINGS = _IMP_pepdock.IMPDOMINO_SHOW_WARNINGS
625 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_ALGEBRA_swigconstant(_IMP_pepdock)
626 IMP_PEPDOCK_HAS_IMP_ALGEBRA = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_ALGEBRA
628 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_ATOM_swigconstant(_IMP_pepdock)
629 IMP_PEPDOCK_HAS_IMP_ATOM = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_ATOM
631 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
632 IMP_PEPDOCK_HAS_IMP_CGAL = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_CGAL
634 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_DISPLAY_swigconstant(_IMP_pepdock)
635 IMP_PEPDOCK_HAS_IMP_DISPLAY = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_DISPLAY
637 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_KERNEL_swigconstant(_IMP_pepdock)
638 IMP_PEPDOCK_HAS_IMP_KERNEL = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_KERNEL
640 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_RMF_swigconstant(_IMP_pepdock)
641 IMP_PEPDOCK_HAS_IMP_RMF = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_RMF
643 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_pepdock)
644 IMP_PEPDOCK_HAS_IMP_SCORE_FUNCTOR = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_SCORE_FUNCTOR
646 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_STATISTICS_swigconstant(_IMP_pepdock)
647 IMP_PEPDOCK_HAS_IMP_STATISTICS = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_STATISTICS
649 _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
650 IMP_PEPDOCK_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_FILESYSTEM
652 _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_GRAPH_swigconstant(_IMP_pepdock)
653 IMP_PEPDOCK_HAS_BOOST_GRAPH = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_GRAPH
655 _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
656 IMP_PEPDOCK_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_PROGRAMOPTIONS
658 _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
659 IMP_PEPDOCK_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_RANDOM
661 _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_REGEX_swigconstant(_IMP_pepdock)
662 IMP_PEPDOCK_HAS_BOOST_REGEX = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_REGEX
664 _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
665 IMP_PEPDOCK_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_SYSTEM
667 _IMP_pepdock.IMP_PEPDOCK_HAS_CGAL_swigconstant(_IMP_pepdock)
668 IMP_PEPDOCK_HAS_CGAL = _IMP_pepdock.IMP_PEPDOCK_HAS_CGAL
670 _IMP_pepdock.IMP_PEPDOCK_HAS_HDF5_swigconstant(_IMP_pepdock)
671 IMP_PEPDOCK_HAS_HDF5 = _IMP_pepdock.IMP_PEPDOCK_HAS_HDF5
673 _IMP_pepdock.IMP_PEPDOCK_HAS_RMF_swigconstant(_IMP_pepdock)
674 IMP_PEPDOCK_HAS_RMF = _IMP_pepdock.IMP_PEPDOCK_HAS_RMF
676 _IMP_pepdock.IMPPEPDOCK_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
677 IMPPEPDOCK_SHOW_WARNINGS = _IMP_pepdock.IMPPEPDOCK_SHOW_WARNINGS
679 def get_module_version():
680 """get_module_version() -> std::string const"""
681 return _IMP_pepdock.get_module_version()
684 """get_example_path(std::string fname) -> std::string"""
685 return _IMP_pepdock.get_example_path(fname)
688 """get_data_path(std::string fname) -> std::string"""
689 return _IMP_pepdock.get_data_path(fname)
691 from .
import _version_check
692 _version_check.check_version(get_module_version())
693 __version__ = get_module_version()
std::string get_data_path(std::string file_name)
Return the full path to one of this module's data files.
Various classes to hold sets of particles.
Make CGAL functionality available to IMP.
Composable functors to implement scores via compile-time composition.
Code to compute statistical measures.
std::string get_example_path(std::string file_name)
Return the full path to one of this module's example files.
Basic functionality that is expected to be used by a wide variety of IMP users.
General purpose algebraic and geometric methods that are expected to be used by a wide variety of IMP...
Output IMP model data in various file formats.
Functionality for loading, creating, manipulating and scoring atomic structures.
Support for the RMF file format for storing hierarchical molecular data and markup.
Divide-and-conquer inferential optimization in discrete space.