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IMP Reference Guide  2.6.2
The Integrative Modeling Platform
foxs/__init__.py
1 # This file was automatically generated by SWIG (http://www.swig.org).
2 # Version 3.0.8
3 #
4 # Do not make changes to this file unless you know what you are doing--modify
5 # the SWIG interface file instead.
6 
7 # This wrapper is part of IMP,
8 # Copyright 2007-2016 IMP Inventors. All rights reserved.
9 
10 from __future__ import print_function, division, absolute_import
11 
12 
13 
14 
15 from sys import version_info
16 if version_info >= (2, 6, 0):
17  def swig_import_helper():
18  from os.path import dirname
19  import imp
20  fp = None
21  try:
22  fp, pathname, description = imp.find_module('_IMP_foxs', [dirname(__file__)])
23  except ImportError:
24  import _IMP_foxs
25  return _IMP_foxs
26  if fp is not None:
27  try:
28  _mod = imp.load_module('_IMP_foxs', fp, pathname, description)
29  finally:
30  fp.close()
31  return _mod
32  _IMP_foxs = swig_import_helper()
33  del swig_import_helper
34 else:
35  import _IMP_foxs
36 del version_info
37 try:
38  _swig_property = property
39 except NameError:
40  pass # Python < 2.2 doesn't have 'property'.
41 
42 
43 def _swig_setattr_nondynamic(self, class_type, name, value, static=1):
44  if (name == "thisown"):
45  return self.this.own(value)
46  if (name == "this"):
47  if type(value).__name__ == 'SwigPyObject':
48  self.__dict__[name] = value
49  return
50  method = class_type.__swig_setmethods__.get(name, None)
51  if method:
52  return method(self, value)
53  if (not static):
54  object.__setattr__(self, name, value)
55  else:
56  raise AttributeError("You cannot add attributes to %s" % self)
57 
58 
59 def _swig_setattr(self, class_type, name, value):
60  return _swig_setattr_nondynamic(self, class_type, name, value, 0)
61 
62 
63 def _swig_getattr_nondynamic(self, class_type, name, static=1):
64  if (name == "thisown"):
65  return self.this.own()
66  method = class_type.__swig_getmethods__.get(name, None)
67  if method:
68  return method(self)
69  if (not static):
70  return object.__getattr__(self, name)
71  else:
72  raise AttributeError(name)
73 
74 def _swig_getattr(self, class_type, name):
75  return _swig_getattr_nondynamic(self, class_type, name, 0)
76 
77 
78 def _swig_repr(self):
79  try:
80  strthis = "proxy of " + self.this.__repr__()
81  except Exception:
82  strthis = ""
83  return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
84 
85 try:
86  _object = object
87  _newclass = 1
88 except AttributeError:
89  class _object:
90  pass
91  _newclass = 0
92 
93 
94 
95 def _swig_setattr_nondynamic_method(set):
96  def set_attr(self, name, value):
97  if (name == "thisown"):
98  return self.this.own(value)
99  if hasattr(self, name) or (name == "this"):
100  set(self, name, value)
101  else:
102  raise AttributeError("You cannot add attributes to %s" % self)
103  return set_attr
104 
105 
106 try:
107  import weakref
108  weakref_proxy = weakref.proxy
109 except Exception:
110  weakref_proxy = lambda x: x
111 
112 
113 class IMP_FOXS_SwigPyIterator(object):
114  """Proxy of C++ swig::IMP_FOXS_SwigPyIterator class."""
115 
116  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
117 
118  def __init__(self, *args, **kwargs):
119  raise AttributeError("No constructor defined - class is abstract")
120  __repr__ = _swig_repr
121  __swig_destroy__ = _IMP_foxs.delete_IMP_FOXS_SwigPyIterator
122  __del__ = lambda self: None
123 
124  def value(self):
125  """value(IMP_FOXS_SwigPyIterator self) -> PyObject *"""
126  return _IMP_foxs.IMP_FOXS_SwigPyIterator_value(self)
127 
128 
129  def incr(self, n=1):
130  """
131  incr(IMP_FOXS_SwigPyIterator self, size_t n=1) -> IMP_FOXS_SwigPyIterator
132  incr(IMP_FOXS_SwigPyIterator self) -> IMP_FOXS_SwigPyIterator
133  """
134  return _IMP_foxs.IMP_FOXS_SwigPyIterator_incr(self, n)
135 
136 
137  def decr(self, n=1):
138  """
139  decr(IMP_FOXS_SwigPyIterator self, size_t n=1) -> IMP_FOXS_SwigPyIterator
140  decr(IMP_FOXS_SwigPyIterator self) -> IMP_FOXS_SwigPyIterator
141  """
142  return _IMP_foxs.IMP_FOXS_SwigPyIterator_decr(self, n)
143 
144 
145  def distance(self, x):
146  """distance(IMP_FOXS_SwigPyIterator self, IMP_FOXS_SwigPyIterator x) -> ptrdiff_t"""
147  return _IMP_foxs.IMP_FOXS_SwigPyIterator_distance(self, x)
148 
149 
150  def equal(self, x):
151  """equal(IMP_FOXS_SwigPyIterator self, IMP_FOXS_SwigPyIterator x) -> bool"""
152  return _IMP_foxs.IMP_FOXS_SwigPyIterator_equal(self, x)
153 
154 
155  def copy(self):
156  """copy(IMP_FOXS_SwigPyIterator self) -> IMP_FOXS_SwigPyIterator"""
157  return _IMP_foxs.IMP_FOXS_SwigPyIterator_copy(self)
158 
159 
160  def next(self):
161  """next(IMP_FOXS_SwigPyIterator self) -> PyObject *"""
162  return _IMP_foxs.IMP_FOXS_SwigPyIterator_next(self)
163 
164 
165  def __next__(self):
166  """__next__(IMP_FOXS_SwigPyIterator self) -> PyObject *"""
167  return _IMP_foxs.IMP_FOXS_SwigPyIterator___next__(self)
168 
169 
170  def previous(self):
171  """previous(IMP_FOXS_SwigPyIterator self) -> PyObject *"""
172  return _IMP_foxs.IMP_FOXS_SwigPyIterator_previous(self)
173 
174 
175  def advance(self, n):
176  """advance(IMP_FOXS_SwigPyIterator self, ptrdiff_t n) -> IMP_FOXS_SwigPyIterator"""
177  return _IMP_foxs.IMP_FOXS_SwigPyIterator_advance(self, n)
178 
179 
180  def __eq__(self, x):
181  """__eq__(IMP_FOXS_SwigPyIterator self, IMP_FOXS_SwigPyIterator x) -> bool"""
182  return _IMP_foxs.IMP_FOXS_SwigPyIterator___eq__(self, x)
183 
184 
185  def __ne__(self, x):
186  """__ne__(IMP_FOXS_SwigPyIterator self, IMP_FOXS_SwigPyIterator x) -> bool"""
187  return _IMP_foxs.IMP_FOXS_SwigPyIterator___ne__(self, x)
188 
189 
190  def __iadd__(self, n):
191  """__iadd__(IMP_FOXS_SwigPyIterator self, ptrdiff_t n) -> IMP_FOXS_SwigPyIterator"""
192  return _IMP_foxs.IMP_FOXS_SwigPyIterator___iadd__(self, n)
193 
194 
195  def __isub__(self, n):
196  """__isub__(IMP_FOXS_SwigPyIterator self, ptrdiff_t n) -> IMP_FOXS_SwigPyIterator"""
197  return _IMP_foxs.IMP_FOXS_SwigPyIterator___isub__(self, n)
198 
199 
200  def __add__(self, n):
201  """__add__(IMP_FOXS_SwigPyIterator self, ptrdiff_t n) -> IMP_FOXS_SwigPyIterator"""
202  return _IMP_foxs.IMP_FOXS_SwigPyIterator___add__(self, n)
203 
204 
205  def __sub__(self, *args):
206  """
207  __sub__(IMP_FOXS_SwigPyIterator self, ptrdiff_t n) -> IMP_FOXS_SwigPyIterator
208  __sub__(IMP_FOXS_SwigPyIterator self, IMP_FOXS_SwigPyIterator x) -> ptrdiff_t
209  """
210  return _IMP_foxs.IMP_FOXS_SwigPyIterator___sub__(self, *args)
211 
212  def __iter__(self):
213  return self
214 IMP_FOXS_SwigPyIterator_swigregister = _IMP_foxs.IMP_FOXS_SwigPyIterator_swigregister
215 IMP_FOXS_SwigPyIterator_swigregister(IMP_FOXS_SwigPyIterator)
216 
217 
218 _value_types=[]
219 _object_types=[]
220 _raii_types=[]
221 _plural_types=[]
222 
223 
224 _IMP_foxs.IMP_DEBUG_swigconstant(_IMP_foxs)
225 IMP_DEBUG = _IMP_foxs.IMP_DEBUG
226 
227 _IMP_foxs.IMP_RELEASE_swigconstant(_IMP_foxs)
228 IMP_RELEASE = _IMP_foxs.IMP_RELEASE
229 
230 _IMP_foxs.IMP_SILENT_swigconstant(_IMP_foxs)
231 IMP_SILENT = _IMP_foxs.IMP_SILENT
232 
233 _IMP_foxs.IMP_PROGRESS_swigconstant(_IMP_foxs)
234 IMP_PROGRESS = _IMP_foxs.IMP_PROGRESS
235 
236 _IMP_foxs.IMP_TERSE_swigconstant(_IMP_foxs)
237 IMP_TERSE = _IMP_foxs.IMP_TERSE
238 
239 _IMP_foxs.IMP_VERBOSE_swigconstant(_IMP_foxs)
240 IMP_VERBOSE = _IMP_foxs.IMP_VERBOSE
241 
242 _IMP_foxs.IMP_MEMORY_swigconstant(_IMP_foxs)
243 IMP_MEMORY = _IMP_foxs.IMP_MEMORY
244 
245 _IMP_foxs.IMP_NONE_swigconstant(_IMP_foxs)
246 IMP_NONE = _IMP_foxs.IMP_NONE
247 
248 _IMP_foxs.IMP_USAGE_swigconstant(_IMP_foxs)
249 IMP_USAGE = _IMP_foxs.IMP_USAGE
250 
251 _IMP_foxs.IMP_INTERNAL_swigconstant(_IMP_foxs)
252 IMP_INTERNAL = _IMP_foxs.IMP_INTERNAL
253 
254 _IMP_foxs.IMP_KERNEL_HAS_LOG4CXX_swigconstant(_IMP_foxs)
255 IMP_KERNEL_HAS_LOG4CXX = _IMP_foxs.IMP_KERNEL_HAS_LOG4CXX
256 
257 _IMP_foxs.IMP_COMPILER_HAS_AUTO_swigconstant(_IMP_foxs)
258 IMP_COMPILER_HAS_AUTO = _IMP_foxs.IMP_COMPILER_HAS_AUTO
259 
260 _IMP_foxs.IMP_COMPILER_HAS_DEBUG_VECTOR_swigconstant(_IMP_foxs)
261 IMP_COMPILER_HAS_DEBUG_VECTOR = _IMP_foxs.IMP_COMPILER_HAS_DEBUG_VECTOR
262 
263 _IMP_foxs.IMP_COMPILER_HAS_UNIQUE_PTR_swigconstant(_IMP_foxs)
264 IMP_COMPILER_HAS_UNIQUE_PTR = _IMP_foxs.IMP_COMPILER_HAS_UNIQUE_PTR
265 
266 _IMP_foxs.IMP_KERNEL_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
267 IMP_KERNEL_HAS_BOOST_RANDOM = _IMP_foxs.IMP_KERNEL_HAS_BOOST_RANDOM
268 
269 _IMP_foxs.IMP_KERNEL_HAS_GPERFTOOLS_swigconstant(_IMP_foxs)
270 IMP_KERNEL_HAS_GPERFTOOLS = _IMP_foxs.IMP_KERNEL_HAS_GPERFTOOLS
271 
272 _IMP_foxs.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER_swigconstant(_IMP_foxs)
273 IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER = _IMP_foxs.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER
274 
275 _IMP_foxs.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER_swigconstant(_IMP_foxs)
276 IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER = _IMP_foxs.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER
277 
278 _IMP_foxs.IMPKERNEL_SHOW_WARNINGS_swigconstant(_IMP_foxs)
279 IMPKERNEL_SHOW_WARNINGS = _IMP_foxs.IMPKERNEL_SHOW_WARNINGS
280 
281 import sys
282 class _DirectorObjects(object):
283  """@internal Simple class to keep references to director objects
284  to prevent premature deletion."""
285  def __init__(self):
286  self._objects = []
287  def register(self, obj):
288  """Take a reference to a director object; will only work for
289  refcounted C++ classes"""
290  if hasattr(obj, 'get_ref_count'):
291  self._objects.append(obj)
292  def cleanup(self):
293  """Only drop our reference and allow cleanup by Python if no other
294  Python references exist (we hold 3 references: one in self._objects,
295  one in x, and one in the argument list for getrefcount) *and* no
296  other C++ references exist (the Python object always holds one)"""
297  objs = [x for x in self._objects if sys.getrefcount(x) > 3 \
298  or x.get_ref_count() > 1]
299 # Do in two steps so the references are kept until the end of the
300 # function (deleting references may trigger a fresh call to this method)
301  self._objects = objs
302  def get_object_count(self):
303  """Get number of director objects (useful for testing only)"""
304  return len(self._objects)
305 _director_objects = _DirectorObjects()
306 
307 class _ostream(object):
308  """Proxy of C++ std::ostream class."""
309 
310  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
311 
312  def __init__(self, *args, **kwargs):
313  raise AttributeError("No constructor defined")
314  __repr__ = _swig_repr
315 
316  def write(self, osa_buf):
317  """write(_ostream self, char const * osa_buf)"""
318  return _IMP_foxs._ostream_write(self, osa_buf)
319 
320 _ostream_swigregister = _IMP_foxs._ostream_swigregister
321 _ostream_swigregister(_ostream)
322 
323 
324 _IMP_foxs.IMP_COMPILER_HAS_OVERRIDE_swigconstant(_IMP_foxs)
325 IMP_COMPILER_HAS_OVERRIDE = _IMP_foxs.IMP_COMPILER_HAS_OVERRIDE
326 
327 _IMP_foxs.IMP_COMPILER_HAS_FINAL_swigconstant(_IMP_foxs)
328 IMP_COMPILER_HAS_FINAL = _IMP_foxs.IMP_COMPILER_HAS_FINAL
329 
330 _IMP_foxs.IMP_HAS_NOEXCEPT_swigconstant(_IMP_foxs)
331 IMP_HAS_NOEXCEPT = _IMP_foxs.IMP_HAS_NOEXCEPT
332 import IMP
333 
334 _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
335 IMP_BENCHMARK_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_FILESYSTEM
336 
337 _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
338 IMP_BENCHMARK_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_PROGRAMOPTIONS
339 
340 _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
341 IMP_BENCHMARK_HAS_BOOST_RANDOM = _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_RANDOM
342 
343 _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
344 IMP_BENCHMARK_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_SYSTEM
345 
346 _IMP_foxs.IMPBENCHMARK_SHOW_WARNINGS_swigconstant(_IMP_foxs)
347 IMPBENCHMARK_SHOW_WARNINGS = _IMP_foxs.IMPBENCHMARK_SHOW_WARNINGS
348 import IMP.benchmark
349 
350 _IMP_foxs.IMP_CGAL_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
351 IMP_CGAL_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_CGAL_HAS_BOOST_FILESYSTEM
352 
353 _IMP_foxs.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
354 IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS
355 
356 _IMP_foxs.IMP_CGAL_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
357 IMP_CGAL_HAS_BOOST_RANDOM = _IMP_foxs.IMP_CGAL_HAS_BOOST_RANDOM
358 
359 _IMP_foxs.IMP_CGAL_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
360 IMP_CGAL_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_CGAL_HAS_BOOST_SYSTEM
361 
362 _IMP_foxs.IMPCGAL_SHOW_WARNINGS_swigconstant(_IMP_foxs)
363 IMPCGAL_SHOW_WARNINGS = _IMP_foxs.IMPCGAL_SHOW_WARNINGS
364 import IMP.cgal
365 
366 _IMP_foxs.IMP_ALGEBRA_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
367 IMP_ALGEBRA_HAS_IMP_CGAL = _IMP_foxs.IMP_ALGEBRA_HAS_IMP_CGAL
368 
369 _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
370 IMP_ALGEBRA_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM
371 
372 _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
373 IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS
374 
375 _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
376 IMP_ALGEBRA_HAS_BOOST_RANDOM = _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_RANDOM
377 
378 _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
379 IMP_ALGEBRA_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_SYSTEM
380 
381 _IMP_foxs.IMP_ALGEBRA_HAS_CGAL_swigconstant(_IMP_foxs)
382 IMP_ALGEBRA_HAS_CGAL = _IMP_foxs.IMP_ALGEBRA_HAS_CGAL
383 
384 _IMP_foxs.IMP_ALGEBRA_HAS_ANN_swigconstant(_IMP_foxs)
385 IMP_ALGEBRA_HAS_ANN = _IMP_foxs.IMP_ALGEBRA_HAS_ANN
386 
387 _IMP_foxs.IMPALGEBRA_SHOW_WARNINGS_swigconstant(_IMP_foxs)
388 IMPALGEBRA_SHOW_WARNINGS = _IMP_foxs.IMPALGEBRA_SHOW_WARNINGS
389 import IMP.algebra
390 
391 _IMP_foxs.IMP_DISPLAY_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
392 IMP_DISPLAY_HAS_IMP_CGAL = _IMP_foxs.IMP_DISPLAY_HAS_IMP_CGAL
393 
394 _IMP_foxs.IMP_DISPLAY_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
395 IMP_DISPLAY_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_DISPLAY_HAS_BOOST_FILESYSTEM
396 
397 _IMP_foxs.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
398 IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS
399 
400 _IMP_foxs.IMP_DISPLAY_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
401 IMP_DISPLAY_HAS_BOOST_RANDOM = _IMP_foxs.IMP_DISPLAY_HAS_BOOST_RANDOM
402 
403 _IMP_foxs.IMP_DISPLAY_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
404 IMP_DISPLAY_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_DISPLAY_HAS_BOOST_SYSTEM
405 
406 _IMP_foxs.IMP_DISPLAY_HAS_CGAL_swigconstant(_IMP_foxs)
407 IMP_DISPLAY_HAS_CGAL = _IMP_foxs.IMP_DISPLAY_HAS_CGAL
408 
409 _IMP_foxs.IMPDISPLAY_SHOW_WARNINGS_swigconstant(_IMP_foxs)
410 IMPDISPLAY_SHOW_WARNINGS = _IMP_foxs.IMPDISPLAY_SHOW_WARNINGS
411 import IMP.display
412 
413 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
414 IMP_SCORE_FUNCTOR_HAS_IMP_CGAL = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL
415 
416 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
417 IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM
418 
419 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
420 IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS
421 
422 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
423 IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM
424 
425 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
426 IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM
427 
428 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_CGAL_swigconstant(_IMP_foxs)
429 IMP_SCORE_FUNCTOR_HAS_CGAL = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_CGAL
430 
431 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_HDF5_swigconstant(_IMP_foxs)
432 IMP_SCORE_FUNCTOR_HAS_HDF5 = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_HDF5
433 
434 _IMP_foxs.IMPSCOREFUNCTOR_SHOW_WARNINGS_swigconstant(_IMP_foxs)
435 IMPSCOREFUNCTOR_SHOW_WARNINGS = _IMP_foxs.IMPSCOREFUNCTOR_SHOW_WARNINGS
436 import IMP.score_functor
437 
438 _IMP_foxs.IMP_CORE_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
439 IMP_CORE_HAS_IMP_CGAL = _IMP_foxs.IMP_CORE_HAS_IMP_CGAL
440 
441 _IMP_foxs.IMP_CORE_HAS_IMP_KERNEL_swigconstant(_IMP_foxs)
442 IMP_CORE_HAS_IMP_KERNEL = _IMP_foxs.IMP_CORE_HAS_IMP_KERNEL
443 
444 _IMP_foxs.IMP_CORE_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
445 IMP_CORE_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_CORE_HAS_BOOST_FILESYSTEM
446 
447 _IMP_foxs.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
448 IMP_CORE_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS
449 
450 _IMP_foxs.IMP_CORE_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
451 IMP_CORE_HAS_BOOST_RANDOM = _IMP_foxs.IMP_CORE_HAS_BOOST_RANDOM
452 
453 _IMP_foxs.IMP_CORE_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
454 IMP_CORE_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_CORE_HAS_BOOST_SYSTEM
455 
456 _IMP_foxs.IMP_CORE_HAS_CGAL_swigconstant(_IMP_foxs)
457 IMP_CORE_HAS_CGAL = _IMP_foxs.IMP_CORE_HAS_CGAL
458 
459 _IMP_foxs.IMP_CORE_HAS_HDF5_swigconstant(_IMP_foxs)
460 IMP_CORE_HAS_HDF5 = _IMP_foxs.IMP_CORE_HAS_HDF5
461 
462 _IMP_foxs.IMPCORE_SHOW_WARNINGS_swigconstant(_IMP_foxs)
463 IMPCORE_SHOW_WARNINGS = _IMP_foxs.IMPCORE_SHOW_WARNINGS
464 import IMP.core
465 
466 _IMP_foxs.IMP_CONTAINER_HAS_IMP_ALGEBRA_swigconstant(_IMP_foxs)
467 IMP_CONTAINER_HAS_IMP_ALGEBRA = _IMP_foxs.IMP_CONTAINER_HAS_IMP_ALGEBRA
468 
469 _IMP_foxs.IMP_CONTAINER_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
470 IMP_CONTAINER_HAS_IMP_CGAL = _IMP_foxs.IMP_CONTAINER_HAS_IMP_CGAL
471 
472 _IMP_foxs.IMP_CONTAINER_HAS_IMP_DISPLAY_swigconstant(_IMP_foxs)
473 IMP_CONTAINER_HAS_IMP_DISPLAY = _IMP_foxs.IMP_CONTAINER_HAS_IMP_DISPLAY
474 
475 _IMP_foxs.IMP_CONTAINER_HAS_IMP_KERNEL_swigconstant(_IMP_foxs)
476 IMP_CONTAINER_HAS_IMP_KERNEL = _IMP_foxs.IMP_CONTAINER_HAS_IMP_KERNEL
477 
478 _IMP_foxs.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_foxs)
479 IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR = _IMP_foxs.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR
480 
481 _IMP_foxs.IMP_CONTAINER_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
482 IMP_CONTAINER_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_CONTAINER_HAS_BOOST_FILESYSTEM
483 
484 _IMP_foxs.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
485 IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS
486 
487 _IMP_foxs.IMP_CONTAINER_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
488 IMP_CONTAINER_HAS_BOOST_RANDOM = _IMP_foxs.IMP_CONTAINER_HAS_BOOST_RANDOM
489 
490 _IMP_foxs.IMP_CONTAINER_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
491 IMP_CONTAINER_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_CONTAINER_HAS_BOOST_SYSTEM
492 
493 _IMP_foxs.IMP_CONTAINER_HAS_CGAL_swigconstant(_IMP_foxs)
494 IMP_CONTAINER_HAS_CGAL = _IMP_foxs.IMP_CONTAINER_HAS_CGAL
495 
496 _IMP_foxs.IMP_CONTAINER_HAS_HDF5_swigconstant(_IMP_foxs)
497 IMP_CONTAINER_HAS_HDF5 = _IMP_foxs.IMP_CONTAINER_HAS_HDF5
498 
499 _IMP_foxs.IMPCONTAINER_SHOW_WARNINGS_swigconstant(_IMP_foxs)
500 IMPCONTAINER_SHOW_WARNINGS = _IMP_foxs.IMPCONTAINER_SHOW_WARNINGS
501 import IMP.container
502 
503 _IMP_foxs.IMP_ATOM_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
504 IMP_ATOM_HAS_IMP_CGAL = _IMP_foxs.IMP_ATOM_HAS_IMP_CGAL
505 
506 _IMP_foxs.IMP_ATOM_HAS_IMP_KERNEL_swigconstant(_IMP_foxs)
507 IMP_ATOM_HAS_IMP_KERNEL = _IMP_foxs.IMP_ATOM_HAS_IMP_KERNEL
508 
509 _IMP_foxs.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_foxs)
510 IMP_ATOM_HAS_IMP_SCORE_FUNCTOR = _IMP_foxs.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR
511 
512 _IMP_foxs.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
513 IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS
514 
515 _IMP_foxs.IMP_ATOM_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
516 IMP_ATOM_HAS_BOOST_RANDOM = _IMP_foxs.IMP_ATOM_HAS_BOOST_RANDOM
517 
518 _IMP_foxs.IMP_ATOM_HAS_BOOST_REGEX_swigconstant(_IMP_foxs)
519 IMP_ATOM_HAS_BOOST_REGEX = _IMP_foxs.IMP_ATOM_HAS_BOOST_REGEX
520 
521 _IMP_foxs.IMP_ATOM_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
522 IMP_ATOM_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_ATOM_HAS_BOOST_SYSTEM
523 
524 _IMP_foxs.IMP_ATOM_HAS_CGAL_swigconstant(_IMP_foxs)
525 IMP_ATOM_HAS_CGAL = _IMP_foxs.IMP_ATOM_HAS_CGAL
526 
527 _IMP_foxs.IMP_ATOM_HAS_HDF5_swigconstant(_IMP_foxs)
528 IMP_ATOM_HAS_HDF5 = _IMP_foxs.IMP_ATOM_HAS_HDF5
529 
530 _IMP_foxs.IMPATOM_SHOW_WARNINGS_swigconstant(_IMP_foxs)
531 IMPATOM_SHOW_WARNINGS = _IMP_foxs.IMPATOM_SHOW_WARNINGS
532 
533 _IMP_foxs.IMP_ATOM_TYPE_INDEX_swigconstant(_IMP_foxs)
534 IMP_ATOM_TYPE_INDEX = _IMP_foxs.IMP_ATOM_TYPE_INDEX
535 
536 _IMP_foxs.IMP_RESIDUE_TYPE_INDEX_swigconstant(_IMP_foxs)
537 IMP_RESIDUE_TYPE_INDEX = _IMP_foxs.IMP_RESIDUE_TYPE_INDEX
538 
539 _IMP_foxs.IMP_HIERARCHY_TYPE_INDEX_swigconstant(_IMP_foxs)
540 IMP_HIERARCHY_TYPE_INDEX = _IMP_foxs.IMP_HIERARCHY_TYPE_INDEX
541 import IMP.atom
542 
543 _IMP_foxs.IMP_SAXS_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
544 IMP_SAXS_HAS_IMP_CGAL = _IMP_foxs.IMP_SAXS_HAS_IMP_CGAL
545 
546 _IMP_foxs.IMP_SAXS_HAS_IMP_CONTAINER_swigconstant(_IMP_foxs)
547 IMP_SAXS_HAS_IMP_CONTAINER = _IMP_foxs.IMP_SAXS_HAS_IMP_CONTAINER
548 
549 _IMP_foxs.IMP_SAXS_HAS_IMP_DISPLAY_swigconstant(_IMP_foxs)
550 IMP_SAXS_HAS_IMP_DISPLAY = _IMP_foxs.IMP_SAXS_HAS_IMP_DISPLAY
551 
552 _IMP_foxs.IMP_SAXS_HAS_IMP_KERNEL_swigconstant(_IMP_foxs)
553 IMP_SAXS_HAS_IMP_KERNEL = _IMP_foxs.IMP_SAXS_HAS_IMP_KERNEL
554 
555 _IMP_foxs.IMP_SAXS_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_foxs)
556 IMP_SAXS_HAS_IMP_SCORE_FUNCTOR = _IMP_foxs.IMP_SAXS_HAS_IMP_SCORE_FUNCTOR
557 
558 _IMP_foxs.IMP_SAXS_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
559 IMP_SAXS_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_SAXS_HAS_BOOST_FILESYSTEM
560 
561 _IMP_foxs.IMP_SAXS_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
562 IMP_SAXS_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_SAXS_HAS_BOOST_PROGRAMOPTIONS
563 
564 _IMP_foxs.IMP_SAXS_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
565 IMP_SAXS_HAS_BOOST_RANDOM = _IMP_foxs.IMP_SAXS_HAS_BOOST_RANDOM
566 
567 _IMP_foxs.IMP_SAXS_HAS_BOOST_REGEX_swigconstant(_IMP_foxs)
568 IMP_SAXS_HAS_BOOST_REGEX = _IMP_foxs.IMP_SAXS_HAS_BOOST_REGEX
569 
570 _IMP_foxs.IMP_SAXS_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
571 IMP_SAXS_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_SAXS_HAS_BOOST_SYSTEM
572 
573 _IMP_foxs.IMP_SAXS_HAS_CGAL_swigconstant(_IMP_foxs)
574 IMP_SAXS_HAS_CGAL = _IMP_foxs.IMP_SAXS_HAS_CGAL
575 
576 _IMP_foxs.IMP_SAXS_HAS_HDF5_swigconstant(_IMP_foxs)
577 IMP_SAXS_HAS_HDF5 = _IMP_foxs.IMP_SAXS_HAS_HDF5
578 
579 _IMP_foxs.IMPSAXS_SHOW_WARNINGS_swigconstant(_IMP_foxs)
580 IMPSAXS_SHOW_WARNINGS = _IMP_foxs.IMPSAXS_SHOW_WARNINGS
581 import IMP.saxs
582 
583 _IMP_foxs.IMP_FOXS_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
584 IMP_FOXS_HAS_IMP_CGAL = _IMP_foxs.IMP_FOXS_HAS_IMP_CGAL
585 
586 _IMP_foxs.IMP_FOXS_HAS_IMP_CONTAINER_swigconstant(_IMP_foxs)
587 IMP_FOXS_HAS_IMP_CONTAINER = _IMP_foxs.IMP_FOXS_HAS_IMP_CONTAINER
588 
589 _IMP_foxs.IMP_FOXS_HAS_IMP_DISPLAY_swigconstant(_IMP_foxs)
590 IMP_FOXS_HAS_IMP_DISPLAY = _IMP_foxs.IMP_FOXS_HAS_IMP_DISPLAY
591 
592 _IMP_foxs.IMP_FOXS_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_foxs)
593 IMP_FOXS_HAS_IMP_SCORE_FUNCTOR = _IMP_foxs.IMP_FOXS_HAS_IMP_SCORE_FUNCTOR
594 
595 _IMP_foxs.IMP_FOXS_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
596 IMP_FOXS_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_FOXS_HAS_BOOST_FILESYSTEM
597 
598 _IMP_foxs.IMP_FOXS_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
599 IMP_FOXS_HAS_BOOST_RANDOM = _IMP_foxs.IMP_FOXS_HAS_BOOST_RANDOM
600 
601 _IMP_foxs.IMP_FOXS_HAS_BOOST_REGEX_swigconstant(_IMP_foxs)
602 IMP_FOXS_HAS_BOOST_REGEX = _IMP_foxs.IMP_FOXS_HAS_BOOST_REGEX
603 
604 _IMP_foxs.IMP_FOXS_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
605 IMP_FOXS_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_FOXS_HAS_BOOST_SYSTEM
606 
607 _IMP_foxs.IMP_FOXS_HAS_CGAL_swigconstant(_IMP_foxs)
608 IMP_FOXS_HAS_CGAL = _IMP_foxs.IMP_FOXS_HAS_CGAL
609 
610 _IMP_foxs.IMP_FOXS_HAS_HDF5_swigconstant(_IMP_foxs)
611 IMP_FOXS_HAS_HDF5 = _IMP_foxs.IMP_FOXS_HAS_HDF5
612 
613 _IMP_foxs.IMPFOXS_SHOW_WARNINGS_swigconstant(_IMP_foxs)
614 IMPFOXS_SHOW_WARNINGS = _IMP_foxs.IMPFOXS_SHOW_WARNINGS
615 
616 def get_module_version():
617  """get_module_version() -> std::string const"""
618  return _IMP_foxs.get_module_version()
619 
620 def get_example_path(fname):
621  """get_example_path(std::string fname) -> std::string"""
622  return _IMP_foxs.get_example_path(fname)
623 
624 def get_data_path(fname):
625  """get_data_path(std::string fname) -> std::string"""
626  return _IMP_foxs.get_data_path(fname)
627 
628 from . import _version_check
629 _version_check.check_version(get_module_version())
630 __version__ = get_module_version()
631 
632 
633 
Various classes to hold sets of particles.
Make CGAL functionality available to IMP.
Composable functors to implement scores via compile-time composition.
Basic functionality that is expected to be used by a wide variety of IMP users.
General purpose algebraic and geometric methods that are expected to be used by a wide variety of IMP...
std::string get_example_path(std::string file_name)
Return the full path to one of this module's example files.
Output IMP model data in various file formats.
Functionality for loading, creating, manipulating and scoring atomic structures.
Support for developing and analyzing benchmarks of IMP code.
std::string get_data_path(std::string file_name)
Return the full path to one of this module's data files.
Support for small angle X-ray scattering (SAXS) data.