IMP logo
IMP Reference Guide  2.6.1
The Integrative Modeling Platform
score_functor/__init__.py
1 # This file was automatically generated by SWIG (http://www.swig.org).
2 # Version 3.0.7
3 #
4 # Do not make changes to this file unless you know what you are doing--modify
5 # the SWIG interface file instead.
6 
7 # This wrapper is part of IMP,
8 # Copyright 2007-2016 IMP Inventors. All rights reserved.
9 
10 from __future__ import print_function, division, absolute_import
11 
12 
13 
14 
15 from sys import version_info
16 if version_info >= (2, 6, 0):
17  def swig_import_helper():
18  from os.path import dirname
19  import imp
20  fp = None
21  try:
22  fp, pathname, description = imp.find_module('_IMP_score_functor', [dirname(__file__)])
23  except ImportError:
24  import _IMP_score_functor
25  return _IMP_score_functor
26  if fp is not None:
27  try:
28  _mod = imp.load_module('_IMP_score_functor', fp, pathname, description)
29  finally:
30  fp.close()
31  return _mod
32  _IMP_score_functor = swig_import_helper()
33  del swig_import_helper
34 else:
35  import _IMP_score_functor
36 del version_info
37 try:
38  _swig_property = property
39 except NameError:
40  pass # Python < 2.2 doesn't have 'property'.
41 
42 
43 def _swig_setattr_nondynamic(self, class_type, name, value, static=1):
44  if (name == "thisown"):
45  return self.this.own(value)
46  if (name == "this"):
47  if type(value).__name__ == 'SwigPyObject':
48  self.__dict__[name] = value
49  return
50  method = class_type.__swig_setmethods__.get(name, None)
51  if method:
52  return method(self, value)
53  if (not static):
54  object.__setattr__(self, name, value)
55  else:
56  raise AttributeError("You cannot add attributes to %s" % self)
57 
58 
59 def _swig_setattr(self, class_type, name, value):
60  return _swig_setattr_nondynamic(self, class_type, name, value, 0)
61 
62 
63 def _swig_getattr_nondynamic(self, class_type, name, static=1):
64  if (name == "thisown"):
65  return self.this.own()
66  method = class_type.__swig_getmethods__.get(name, None)
67  if method:
68  return method(self)
69  if (not static):
70  return object.__getattr__(self, name)
71  else:
72  raise AttributeError(name)
73 
74 def _swig_getattr(self, class_type, name):
75  return _swig_getattr_nondynamic(self, class_type, name, 0)
76 
77 
78 def _swig_repr(self):
79  try:
80  strthis = "proxy of " + self.this.__repr__()
81  except:
82  strthis = ""
83  return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
84 
85 try:
86  _object = object
87  _newclass = 1
88 except AttributeError:
89  class _object:
90  pass
91  _newclass = 0
92 
93 
94 
95 def _swig_setattr_nondynamic_method(set):
96  def set_attr(self, name, value):
97  if (name == "thisown"):
98  return self.this.own(value)
99  if hasattr(self, name) or (name == "this"):
100  set(self, name, value)
101  else:
102  raise AttributeError("You cannot add attributes to %s" % self)
103  return set_attr
104 
105 
106 try:
107  import weakref
108  weakref_proxy = weakref.proxy
109 except:
110  weakref_proxy = lambda x: x
111 
112 
113 class IMP_SCORE_FUNCTOR_SwigPyIterator(object):
114  """Proxy of C++ swig::IMP_SCORE_FUNCTOR_SwigPyIterator class"""
115  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
116 
117  def __init__(self, *args, **kwargs):
118  raise AttributeError("No constructor defined - class is abstract")
119  __repr__ = _swig_repr
120  __swig_destroy__ = _IMP_score_functor.delete_IMP_SCORE_FUNCTOR_SwigPyIterator
121  __del__ = lambda self: None
122 
123  def value(self):
124  """value(IMP_SCORE_FUNCTOR_SwigPyIterator self) -> PyObject *"""
125  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_value(self)
126 
127 
128  def incr(self, n=1):
129  """
130  incr(IMP_SCORE_FUNCTOR_SwigPyIterator self, size_t n=1) -> IMP_SCORE_FUNCTOR_SwigPyIterator
131  incr(IMP_SCORE_FUNCTOR_SwigPyIterator self) -> IMP_SCORE_FUNCTOR_SwigPyIterator
132  """
133  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_incr(self, n)
134 
135 
136  def decr(self, n=1):
137  """
138  decr(IMP_SCORE_FUNCTOR_SwigPyIterator self, size_t n=1) -> IMP_SCORE_FUNCTOR_SwigPyIterator
139  decr(IMP_SCORE_FUNCTOR_SwigPyIterator self) -> IMP_SCORE_FUNCTOR_SwigPyIterator
140  """
141  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_decr(self, n)
142 
143 
144  def distance(self, x):
145  """distance(IMP_SCORE_FUNCTOR_SwigPyIterator self, IMP_SCORE_FUNCTOR_SwigPyIterator x) -> ptrdiff_t"""
146  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_distance(self, x)
147 
148 
149  def equal(self, x):
150  """equal(IMP_SCORE_FUNCTOR_SwigPyIterator self, IMP_SCORE_FUNCTOR_SwigPyIterator x) -> bool"""
151  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_equal(self, x)
152 
153 
154  def copy(self):
155  """copy(IMP_SCORE_FUNCTOR_SwigPyIterator self) -> IMP_SCORE_FUNCTOR_SwigPyIterator"""
156  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_copy(self)
157 
158 
159  def next(self):
160  """next(IMP_SCORE_FUNCTOR_SwigPyIterator self) -> PyObject *"""
161  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_next(self)
162 
163 
164  def __next__(self):
165  """__next__(IMP_SCORE_FUNCTOR_SwigPyIterator self) -> PyObject *"""
166  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator___next__(self)
167 
168 
169  def previous(self):
170  """previous(IMP_SCORE_FUNCTOR_SwigPyIterator self) -> PyObject *"""
171  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_previous(self)
172 
173 
174  def advance(self, n):
175  """advance(IMP_SCORE_FUNCTOR_SwigPyIterator self, ptrdiff_t n) -> IMP_SCORE_FUNCTOR_SwigPyIterator"""
176  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_advance(self, n)
177 
178 
179  def __eq__(self, x):
180  """__eq__(IMP_SCORE_FUNCTOR_SwigPyIterator self, IMP_SCORE_FUNCTOR_SwigPyIterator x) -> bool"""
181  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator___eq__(self, x)
182 
183 
184  def __ne__(self, x):
185  """__ne__(IMP_SCORE_FUNCTOR_SwigPyIterator self, IMP_SCORE_FUNCTOR_SwigPyIterator x) -> bool"""
186  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator___ne__(self, x)
187 
188 
189  def __iadd__(self, n):
190  """__iadd__(IMP_SCORE_FUNCTOR_SwigPyIterator self, ptrdiff_t n) -> IMP_SCORE_FUNCTOR_SwigPyIterator"""
191  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator___iadd__(self, n)
192 
193 
194  def __isub__(self, n):
195  """__isub__(IMP_SCORE_FUNCTOR_SwigPyIterator self, ptrdiff_t n) -> IMP_SCORE_FUNCTOR_SwigPyIterator"""
196  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator___isub__(self, n)
197 
198 
199  def __add__(self, n):
200  """__add__(IMP_SCORE_FUNCTOR_SwigPyIterator self, ptrdiff_t n) -> IMP_SCORE_FUNCTOR_SwigPyIterator"""
201  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator___add__(self, n)
202 
203 
204  def __sub__(self, *args):
205  """
206  __sub__(IMP_SCORE_FUNCTOR_SwigPyIterator self, ptrdiff_t n) -> IMP_SCORE_FUNCTOR_SwigPyIterator
207  __sub__(IMP_SCORE_FUNCTOR_SwigPyIterator self, IMP_SCORE_FUNCTOR_SwigPyIterator x) -> ptrdiff_t
208  """
209  return _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator___sub__(self, *args)
210 
211  def __iter__(self):
212  return self
213 IMP_SCORE_FUNCTOR_SwigPyIterator_swigregister = _IMP_score_functor.IMP_SCORE_FUNCTOR_SwigPyIterator_swigregister
214 IMP_SCORE_FUNCTOR_SwigPyIterator_swigregister(IMP_SCORE_FUNCTOR_SwigPyIterator)
215 
216 
217 _value_types=[]
218 _object_types=[]
219 _raii_types=[]
220 _plural_types=[]
221 
222 
223 _IMP_score_functor.IMP_DEBUG_swigconstant(_IMP_score_functor)
224 IMP_DEBUG = _IMP_score_functor.IMP_DEBUG
225 
226 _IMP_score_functor.IMP_RELEASE_swigconstant(_IMP_score_functor)
227 IMP_RELEASE = _IMP_score_functor.IMP_RELEASE
228 
229 _IMP_score_functor.IMP_SILENT_swigconstant(_IMP_score_functor)
230 IMP_SILENT = _IMP_score_functor.IMP_SILENT
231 
232 _IMP_score_functor.IMP_PROGRESS_swigconstant(_IMP_score_functor)
233 IMP_PROGRESS = _IMP_score_functor.IMP_PROGRESS
234 
235 _IMP_score_functor.IMP_TERSE_swigconstant(_IMP_score_functor)
236 IMP_TERSE = _IMP_score_functor.IMP_TERSE
237 
238 _IMP_score_functor.IMP_VERBOSE_swigconstant(_IMP_score_functor)
239 IMP_VERBOSE = _IMP_score_functor.IMP_VERBOSE
240 
241 _IMP_score_functor.IMP_MEMORY_swigconstant(_IMP_score_functor)
242 IMP_MEMORY = _IMP_score_functor.IMP_MEMORY
243 
244 _IMP_score_functor.IMP_NONE_swigconstant(_IMP_score_functor)
245 IMP_NONE = _IMP_score_functor.IMP_NONE
246 
247 _IMP_score_functor.IMP_USAGE_swigconstant(_IMP_score_functor)
248 IMP_USAGE = _IMP_score_functor.IMP_USAGE
249 
250 _IMP_score_functor.IMP_INTERNAL_swigconstant(_IMP_score_functor)
251 IMP_INTERNAL = _IMP_score_functor.IMP_INTERNAL
252 
253 _IMP_score_functor.IMP_KERNEL_HAS_LOG4CXX_swigconstant(_IMP_score_functor)
254 IMP_KERNEL_HAS_LOG4CXX = _IMP_score_functor.IMP_KERNEL_HAS_LOG4CXX
255 
256 _IMP_score_functor.IMP_COMPILER_HAS_AUTO_swigconstant(_IMP_score_functor)
257 IMP_COMPILER_HAS_AUTO = _IMP_score_functor.IMP_COMPILER_HAS_AUTO
258 
259 _IMP_score_functor.IMP_COMPILER_HAS_DEBUG_VECTOR_swigconstant(_IMP_score_functor)
260 IMP_COMPILER_HAS_DEBUG_VECTOR = _IMP_score_functor.IMP_COMPILER_HAS_DEBUG_VECTOR
261 
262 _IMP_score_functor.IMP_COMPILER_HAS_UNIQUE_PTR_swigconstant(_IMP_score_functor)
263 IMP_COMPILER_HAS_UNIQUE_PTR = _IMP_score_functor.IMP_COMPILER_HAS_UNIQUE_PTR
264 
265 _IMP_score_functor.IMP_KERNEL_HAS_BOOST_RANDOM_swigconstant(_IMP_score_functor)
266 IMP_KERNEL_HAS_BOOST_RANDOM = _IMP_score_functor.IMP_KERNEL_HAS_BOOST_RANDOM
267 
268 _IMP_score_functor.IMP_KERNEL_HAS_GPERFTOOLS_swigconstant(_IMP_score_functor)
269 IMP_KERNEL_HAS_GPERFTOOLS = _IMP_score_functor.IMP_KERNEL_HAS_GPERFTOOLS
270 
271 _IMP_score_functor.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER_swigconstant(_IMP_score_functor)
272 IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER = _IMP_score_functor.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER
273 
274 _IMP_score_functor.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER_swigconstant(_IMP_score_functor)
275 IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER = _IMP_score_functor.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER
276 
277 _IMP_score_functor.IMPKERNEL_SHOW_WARNINGS_swigconstant(_IMP_score_functor)
278 IMPKERNEL_SHOW_WARNINGS = _IMP_score_functor.IMPKERNEL_SHOW_WARNINGS
279 
280 import sys
281 class _DirectorObjects(object):
282  """@internal Simple class to keep references to director objects
283  to prevent premature deletion."""
284  def __init__(self):
285  self._objects = []
286  def register(self, obj):
287  """Take a reference to a director object; will only work for
288  refcounted C++ classes"""
289  if hasattr(obj, 'get_ref_count'):
290  self._objects.append(obj)
291  def cleanup(self):
292  """Only drop our reference and allow cleanup by Python if no other
293  Python references exist (we hold 3 references: one in self._objects,
294  one in x, and one in the argument list for getrefcount) *and* no
295  other C++ references exist (the Python object always holds one)"""
296  objs = [x for x in self._objects if sys.getrefcount(x) > 3 \
297  or x.get_ref_count() > 1]
298 # Do in two steps so the references are kept until the end of the
299 # function (deleting references may trigger a fresh call to this method)
300  self._objects = objs
301  def get_object_count(self):
302  """Get number of director objects (useful for testing only)"""
303  return len(self._objects)
304 _director_objects = _DirectorObjects()
305 
306 class _ostream(object):
307  """Proxy of C++ std::ostream class"""
308  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
309 
310  def __init__(self, *args, **kwargs):
311  raise AttributeError("No constructor defined")
312  __repr__ = _swig_repr
313 
314  def write(self, osa_buf):
315  """write(_ostream self, char const * osa_buf)"""
316  return _IMP_score_functor._ostream_write(self, osa_buf)
317 
318 _ostream_swigregister = _IMP_score_functor._ostream_swigregister
319 _ostream_swigregister(_ostream)
320 
321 
322 _IMP_score_functor.IMP_COMPILER_HAS_OVERRIDE_swigconstant(_IMP_score_functor)
323 IMP_COMPILER_HAS_OVERRIDE = _IMP_score_functor.IMP_COMPILER_HAS_OVERRIDE
324 
325 _IMP_score_functor.IMP_COMPILER_HAS_FINAL_swigconstant(_IMP_score_functor)
326 IMP_COMPILER_HAS_FINAL = _IMP_score_functor.IMP_COMPILER_HAS_FINAL
327 
328 _IMP_score_functor.IMP_HAS_NOEXCEPT_swigconstant(_IMP_score_functor)
329 IMP_HAS_NOEXCEPT = _IMP_score_functor.IMP_HAS_NOEXCEPT
330 import IMP
331 
332 _IMP_score_functor.IMP_CGAL_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_score_functor)
333 IMP_CGAL_HAS_BOOST_FILESYSTEM = _IMP_score_functor.IMP_CGAL_HAS_BOOST_FILESYSTEM
334 
335 _IMP_score_functor.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_score_functor)
336 IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS = _IMP_score_functor.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS
337 
338 _IMP_score_functor.IMP_CGAL_HAS_BOOST_RANDOM_swigconstant(_IMP_score_functor)
339 IMP_CGAL_HAS_BOOST_RANDOM = _IMP_score_functor.IMP_CGAL_HAS_BOOST_RANDOM
340 
341 _IMP_score_functor.IMP_CGAL_HAS_BOOST_SYSTEM_swigconstant(_IMP_score_functor)
342 IMP_CGAL_HAS_BOOST_SYSTEM = _IMP_score_functor.IMP_CGAL_HAS_BOOST_SYSTEM
343 
344 _IMP_score_functor.IMPCGAL_SHOW_WARNINGS_swigconstant(_IMP_score_functor)
345 IMPCGAL_SHOW_WARNINGS = _IMP_score_functor.IMPCGAL_SHOW_WARNINGS
346 import IMP.cgal
347 
348 _IMP_score_functor.IMP_ALGEBRA_HAS_IMP_CGAL_swigconstant(_IMP_score_functor)
349 IMP_ALGEBRA_HAS_IMP_CGAL = _IMP_score_functor.IMP_ALGEBRA_HAS_IMP_CGAL
350 
351 _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_score_functor)
352 IMP_ALGEBRA_HAS_BOOST_FILESYSTEM = _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM
353 
354 _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_score_functor)
355 IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS = _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS
356 
357 _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_RANDOM_swigconstant(_IMP_score_functor)
358 IMP_ALGEBRA_HAS_BOOST_RANDOM = _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_RANDOM
359 
360 _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_SYSTEM_swigconstant(_IMP_score_functor)
361 IMP_ALGEBRA_HAS_BOOST_SYSTEM = _IMP_score_functor.IMP_ALGEBRA_HAS_BOOST_SYSTEM
362 
363 _IMP_score_functor.IMP_ALGEBRA_HAS_CGAL_swigconstant(_IMP_score_functor)
364 IMP_ALGEBRA_HAS_CGAL = _IMP_score_functor.IMP_ALGEBRA_HAS_CGAL
365 
366 _IMP_score_functor.IMP_ALGEBRA_HAS_ANN_swigconstant(_IMP_score_functor)
367 IMP_ALGEBRA_HAS_ANN = _IMP_score_functor.IMP_ALGEBRA_HAS_ANN
368 
369 _IMP_score_functor.IMPALGEBRA_SHOW_WARNINGS_swigconstant(_IMP_score_functor)
370 IMPALGEBRA_SHOW_WARNINGS = _IMP_score_functor.IMPALGEBRA_SHOW_WARNINGS
371 import IMP.algebra
372 
373 _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL_swigconstant(_IMP_score_functor)
374 IMP_SCORE_FUNCTOR_HAS_IMP_CGAL = _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL
375 
376 _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_score_functor)
377 IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM = _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM
378 
379 _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_score_functor)
380 IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS = _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS
381 
382 _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM_swigconstant(_IMP_score_functor)
383 IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM = _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM
384 
385 _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM_swigconstant(_IMP_score_functor)
386 IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM = _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM
387 
388 _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_CGAL_swigconstant(_IMP_score_functor)
389 IMP_SCORE_FUNCTOR_HAS_CGAL = _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_CGAL
390 
391 _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_HDF5_swigconstant(_IMP_score_functor)
392 IMP_SCORE_FUNCTOR_HAS_HDF5 = _IMP_score_functor.IMP_SCORE_FUNCTOR_HAS_HDF5
393 
394 _IMP_score_functor.IMPSCOREFUNCTOR_SHOW_WARNINGS_swigconstant(_IMP_score_functor)
395 IMPSCOREFUNCTOR_SHOW_WARNINGS = _IMP_score_functor.IMPSCOREFUNCTOR_SHOW_WARNINGS
396 class Score(object):
397  """Proxy of C++ IMP::score_functor::Score class"""
398  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
399  __repr__ = _swig_repr
400 
401  def __init__(self):
402  """__init__(IMP::score_functor::Score self) -> Score"""
403  this = _IMP_score_functor.new_Score()
404  try:
405  self.this.append(this)
406  except:
407  self.this = this
408 
409  def get_inputs(self, m, pis):
410  """get_inputs(Score self, Model m, IMP::ParticleIndexes const & pis) -> IMP::ModelObjectsTemp"""
411  return _IMP_score_functor.Score_get_inputs(self, m, pis)
412 
413 
414  def show(self, arg2):
415  """show(Score self, _ostream arg2)"""
416  return _IMP_score_functor.Score_show(self, arg2)
417 
418  __swig_destroy__ = _IMP_score_functor.delete_Score
419  __del__ = lambda self: None
420 Score_swigregister = _IMP_score_functor.Score_swigregister
421 Score_swigregister(Score)
422 
423 class _DopeBase(Score):
424  """Proxy of C++ IMP::score_functor::Statistical<(IMP::score_functor::DopeType,false,true)> class"""
425  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
426  __repr__ = _swig_repr
427 
428  def __init__(self, *args):
429  """
430  __init__(IMP::score_functor::Statistical<(IMP::score_functor::DopeType,false,true)> self, IntKey k, double threshold, TextInput data_file) -> _DopeBase
431  __init__(IMP::score_functor::Statistical<(IMP::score_functor::DopeType,false,true)> self, IntKey k, double threshold, TextInput data_file, unsigned int shift) -> _DopeBase
432  """
433  this = _IMP_score_functor.new__DopeBase(*args)
434  try:
435  self.this.append(this)
436  except:
437  self.this = this
438 
439  def get_score(self, m, pp, distance):
440  """get_score(_DopeBase self, Model m, IMP::ParticleIndexPair const & pp, double distance) -> double"""
441  return _IMP_score_functor._DopeBase_get_score(self, m, pp, distance)
442 
443 
444  def get_score_and_derivative(self, m, pp, distance):
445  """get_score_and_derivative(_DopeBase self, Model m, IMP::Array< 2,IMP::ParticleIndex > const & pp, double distance) -> IMP::DerivativePair"""
446  return _IMP_score_functor._DopeBase_get_score_and_derivative(self, m, pp, distance)
447 
448 
449  def get_maximum_range(self, arg2, arg3):
450  """get_maximum_range(_DopeBase self, Model arg2, IMP::ParticleIndexPair const & arg3) -> double"""
451  return _IMP_score_functor._DopeBase_get_maximum_range(self, arg2, arg3)
452 
453 
454  def get_is_trivially_zero(self, m, p, squared_distance):
455  """get_is_trivially_zero(_DopeBase self, Model m, IMP::ParticleIndexPair const & p, double squared_distance) -> bool"""
456  return _IMP_score_functor._DopeBase_get_is_trivially_zero(self, m, p, squared_distance)
457 
458  __swig_destroy__ = _IMP_score_functor.delete__DopeBase
459  __del__ = lambda self: None
460 _DopeBase_swigregister = _IMP_score_functor._DopeBase_swigregister
461 _DopeBase_swigregister(_DopeBase)
462 
463 class Dope(_DopeBase):
464  """Proxy of C++ IMP::score_functor::Dope class"""
465  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
466  __repr__ = _swig_repr
467 
468  def __init__(self, *args):
469  """
470  __init__(IMP::score_functor::Dope self, double threshold) -> Dope
471  __init__(IMP::score_functor::Dope self) -> Dope
472  __init__(IMP::score_functor::Dope self, double threshold, TextInput data_file) -> Dope
473  """
474  this = _IMP_score_functor.new_Dope(*args)
475  try:
476  self.this.append(this)
477  except:
478  self.this = this
479 
480  def get_dope_type_key():
481  """get_dope_type_key() -> IntKey"""
482  return _IMP_score_functor.Dope_get_dope_type_key()
483 
484  get_dope_type_key = staticmethod(get_dope_type_key)
485  __swig_destroy__ = _IMP_score_functor.delete_Dope
486  __del__ = lambda self: None
487 Dope_swigregister = _IMP_score_functor.Dope_swigregister
488 Dope_swigregister(Dope)
489 
490 def Dope_get_dope_type_key():
491  """Dope_get_dope_type_key() -> IntKey"""
492  return _IMP_score_functor.Dope_get_dope_type_key()
493 
494 class UnaryFunctionEvaluate(Score):
495  """Proxy of C++ IMP::score_functor::UnaryFunctionEvaluate class"""
496  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
497  __repr__ = _swig_repr
498 
499  def __init__(self, uf):
500  """__init__(IMP::score_functor::UnaryFunctionEvaluate self, UnaryFunction uf) -> UnaryFunctionEvaluate"""
501  this = _IMP_score_functor.new_UnaryFunctionEvaluate(uf)
502  try:
503  self.this.append(this)
504  except:
505  self.this = this
506  __swig_destroy__ = _IMP_score_functor.delete_UnaryFunctionEvaluate
507  __del__ = lambda self: None
508 UnaryFunctionEvaluate_swigregister = _IMP_score_functor.UnaryFunctionEvaluate_swigregister
509 UnaryFunctionEvaluate_swigregister(UnaryFunctionEvaluate)
510 
511 
512 def get_module_version():
513  """get_module_version() -> std::string const"""
514  return _IMP_score_functor.get_module_version()
515 
516 def get_example_path(fname):
517  """get_example_path(std::string fname) -> std::string"""
518  return _IMP_score_functor.get_example_path(fname)
519 
520 def get_data_path(fname):
521  """get_data_path(std::string fname) -> std::string"""
522  return _IMP_score_functor.get_data_path(fname)
523 
524 from . import _version_check
525 _version_check.check_version(get_module_version())
526 __version__ = get_module_version()
527 
528 
529 
Make CGAL functionality available to IMP.
std::string get_data_path(std::string file_name)
Return the full path to one of this module's data files.
std::string get_example_path(std::string file_name)
Return the full path to one of this module's example files.
std::ostream & show(Hierarchy h, std::ostream &out=std::cout)
Print the hierarchy using a given decorator to display each node.
General purpose algebraic and geometric methods that are expected to be used by a wide variety of IMP...