10 from __future__
import print_function, division, absolute_import
15 from sys
import version_info
16 if version_info >= (2, 6, 0):
17 def swig_import_helper():
18 from os.path
import dirname
22 fp, pathname, description = imp.find_module(
'_IMP_pepdock', [dirname(__file__)])
28 _mod = imp.load_module(
'_IMP_pepdock', fp, pathname, description)
32 _IMP_pepdock = swig_import_helper()
33 del swig_import_helper
38 _swig_property = property
43 def _swig_setattr_nondynamic(self, class_type, name, value, static=1):
44 if (name ==
"thisown"):
45 return self.this.own(value)
47 if type(value).__name__ ==
'SwigPyObject':
48 self.__dict__[name] = value
50 method = class_type.__swig_setmethods__.get(name,
None)
52 return method(self, value)
54 object.__setattr__(self, name, value)
56 raise AttributeError(
"You cannot add attributes to %s" % self)
59 def _swig_setattr(self, class_type, name, value):
60 return _swig_setattr_nondynamic(self, class_type, name, value, 0)
63 def _swig_getattr_nondynamic(self, class_type, name, static=1):
64 if (name ==
"thisown"):
65 return self.this.own()
66 method = class_type.__swig_getmethods__.get(name,
None)
70 return object.__getattr__(self, name)
72 raise AttributeError(name)
74 def _swig_getattr(self, class_type, name):
75 return _swig_getattr_nondynamic(self, class_type, name, 0)
80 strthis =
"proxy of " + self.this.__repr__()
83 return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
88 except AttributeError:
95 def _swig_setattr_nondynamic_method(set):
96 def set_attr(self, name, value):
97 if (name ==
"thisown"):
98 return self.this.own(value)
99 if hasattr(self, name)
or (name ==
"this"):
100 set(self, name, value)
102 raise AttributeError(
"You cannot add attributes to %s" % self)
108 weakref_proxy = weakref.proxy
110 weakref_proxy =
lambda x: x
113 class IMP_PEPDOCK_SwigPyIterator(object):
114 """Proxy of C++ swig::IMP_PEPDOCK_SwigPyIterator class"""
115 thisown = _swig_property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
'The membership flag')
117 def __init__(self, *args, **kwargs):
118 raise AttributeError(
"No constructor defined - class is abstract")
119 __repr__ = _swig_repr
120 __swig_destroy__ = _IMP_pepdock.delete_IMP_PEPDOCK_SwigPyIterator
121 __del__ =
lambda self:
None
124 """value(IMP_PEPDOCK_SwigPyIterator self) -> PyObject *"""
125 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_value(self)
130 incr(IMP_PEPDOCK_SwigPyIterator self, size_t n=1) -> IMP_PEPDOCK_SwigPyIterator
131 incr(IMP_PEPDOCK_SwigPyIterator self) -> IMP_PEPDOCK_SwigPyIterator
133 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_incr(self, n)
138 decr(IMP_PEPDOCK_SwigPyIterator self, size_t n=1) -> IMP_PEPDOCK_SwigPyIterator
139 decr(IMP_PEPDOCK_SwigPyIterator self) -> IMP_PEPDOCK_SwigPyIterator
141 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_decr(self, n)
144 def distance(self, x):
145 """distance(IMP_PEPDOCK_SwigPyIterator self, IMP_PEPDOCK_SwigPyIterator x) -> ptrdiff_t"""
146 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_distance(self, x)
150 """equal(IMP_PEPDOCK_SwigPyIterator self, IMP_PEPDOCK_SwigPyIterator x) -> bool"""
151 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_equal(self, x)
155 """copy(IMP_PEPDOCK_SwigPyIterator self) -> IMP_PEPDOCK_SwigPyIterator"""
156 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_copy(self)
160 """next(IMP_PEPDOCK_SwigPyIterator self) -> PyObject *"""
161 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_next(self)
165 """__next__(IMP_PEPDOCK_SwigPyIterator self) -> PyObject *"""
166 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___next__(self)
170 """previous(IMP_PEPDOCK_SwigPyIterator self) -> PyObject *"""
171 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_previous(self)
174 def advance(self, n):
175 """advance(IMP_PEPDOCK_SwigPyIterator self, ptrdiff_t n) -> IMP_PEPDOCK_SwigPyIterator"""
176 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_advance(self, n)
180 """__eq__(IMP_PEPDOCK_SwigPyIterator self, IMP_PEPDOCK_SwigPyIterator x) -> bool"""
181 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___eq__(self, x)
185 """__ne__(IMP_PEPDOCK_SwigPyIterator self, IMP_PEPDOCK_SwigPyIterator x) -> bool"""
186 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___ne__(self, x)
189 def __iadd__(self, n):
190 """__iadd__(IMP_PEPDOCK_SwigPyIterator self, ptrdiff_t n) -> IMP_PEPDOCK_SwigPyIterator"""
191 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___iadd__(self, n)
194 def __isub__(self, n):
195 """__isub__(IMP_PEPDOCK_SwigPyIterator self, ptrdiff_t n) -> IMP_PEPDOCK_SwigPyIterator"""
196 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___isub__(self, n)
199 def __add__(self, n):
200 """__add__(IMP_PEPDOCK_SwigPyIterator self, ptrdiff_t n) -> IMP_PEPDOCK_SwigPyIterator"""
201 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___add__(self, n)
204 def __sub__(self, *args):
206 __sub__(IMP_PEPDOCK_SwigPyIterator self, ptrdiff_t n) -> IMP_PEPDOCK_SwigPyIterator
207 __sub__(IMP_PEPDOCK_SwigPyIterator self, IMP_PEPDOCK_SwigPyIterator x) -> ptrdiff_t
209 return _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator___sub__(self, *args)
213 IMP_PEPDOCK_SwigPyIterator_swigregister = _IMP_pepdock.IMP_PEPDOCK_SwigPyIterator_swigregister
214 IMP_PEPDOCK_SwigPyIterator_swigregister(IMP_PEPDOCK_SwigPyIterator)
223 _IMP_pepdock.IMP_DEBUG_swigconstant(_IMP_pepdock)
224 IMP_DEBUG = _IMP_pepdock.IMP_DEBUG
226 _IMP_pepdock.IMP_RELEASE_swigconstant(_IMP_pepdock)
227 IMP_RELEASE = _IMP_pepdock.IMP_RELEASE
229 _IMP_pepdock.IMP_SILENT_swigconstant(_IMP_pepdock)
230 IMP_SILENT = _IMP_pepdock.IMP_SILENT
232 _IMP_pepdock.IMP_PROGRESS_swigconstant(_IMP_pepdock)
233 IMP_PROGRESS = _IMP_pepdock.IMP_PROGRESS
235 _IMP_pepdock.IMP_TERSE_swigconstant(_IMP_pepdock)
236 IMP_TERSE = _IMP_pepdock.IMP_TERSE
238 _IMP_pepdock.IMP_VERBOSE_swigconstant(_IMP_pepdock)
239 IMP_VERBOSE = _IMP_pepdock.IMP_VERBOSE
241 _IMP_pepdock.IMP_MEMORY_swigconstant(_IMP_pepdock)
242 IMP_MEMORY = _IMP_pepdock.IMP_MEMORY
244 _IMP_pepdock.IMP_NONE_swigconstant(_IMP_pepdock)
245 IMP_NONE = _IMP_pepdock.IMP_NONE
247 _IMP_pepdock.IMP_USAGE_swigconstant(_IMP_pepdock)
248 IMP_USAGE = _IMP_pepdock.IMP_USAGE
250 _IMP_pepdock.IMP_INTERNAL_swigconstant(_IMP_pepdock)
251 IMP_INTERNAL = _IMP_pepdock.IMP_INTERNAL
253 _IMP_pepdock.IMP_KERNEL_HAS_LOG4CXX_swigconstant(_IMP_pepdock)
254 IMP_KERNEL_HAS_LOG4CXX = _IMP_pepdock.IMP_KERNEL_HAS_LOG4CXX
256 _IMP_pepdock.IMP_COMPILER_HAS_AUTO_swigconstant(_IMP_pepdock)
257 IMP_COMPILER_HAS_AUTO = _IMP_pepdock.IMP_COMPILER_HAS_AUTO
259 _IMP_pepdock.IMP_COMPILER_HAS_DEBUG_VECTOR_swigconstant(_IMP_pepdock)
260 IMP_COMPILER_HAS_DEBUG_VECTOR = _IMP_pepdock.IMP_COMPILER_HAS_DEBUG_VECTOR
262 _IMP_pepdock.IMP_COMPILER_HAS_UNIQUE_PTR_swigconstant(_IMP_pepdock)
263 IMP_COMPILER_HAS_UNIQUE_PTR = _IMP_pepdock.IMP_COMPILER_HAS_UNIQUE_PTR
265 _IMP_pepdock.IMP_KERNEL_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
266 IMP_KERNEL_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_KERNEL_HAS_BOOST_RANDOM
268 _IMP_pepdock.IMP_KERNEL_HAS_GPERFTOOLS_swigconstant(_IMP_pepdock)
269 IMP_KERNEL_HAS_GPERFTOOLS = _IMP_pepdock.IMP_KERNEL_HAS_GPERFTOOLS
271 _IMP_pepdock.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER_swigconstant(_IMP_pepdock)
272 IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER = _IMP_pepdock.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER
274 _IMP_pepdock.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER_swigconstant(_IMP_pepdock)
275 IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER = _IMP_pepdock.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER
277 _IMP_pepdock.IMPKERNEL_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
278 IMPKERNEL_SHOW_WARNINGS = _IMP_pepdock.IMPKERNEL_SHOW_WARNINGS
281 class _DirectorObjects(object):
282 """@internal Simple class to keep references to director objects
283 to prevent premature deletion."""
286 def register(self, obj):
287 """Take a reference to a director object; will only work for
288 refcounted C++ classes"""
289 if hasattr(obj,
'get_ref_count'):
290 self._objects.append(obj)
292 """Only drop our reference and allow cleanup by Python if no other
293 Python references exist (we hold 3 references: one in self._objects,
294 one in x, and one in the argument list for getrefcount) *and* no
295 other C++ references exist (the Python object always holds one)"""
296 objs = [x
for x
in self._objects
if sys.getrefcount(x) > 3 \
297 or x.get_ref_count() > 1]
301 def get_object_count(self):
302 """Get number of director objects (useful for testing only)"""
303 return len(self._objects)
304 _director_objects = _DirectorObjects()
306 class _ostream(object):
307 """Proxy of C++ std::ostream class"""
308 thisown = _swig_property(
lambda x: x.this.own(),
lambda x, v: x.this.own(v), doc=
'The membership flag')
310 def __init__(self, *args, **kwargs):
311 raise AttributeError(
"No constructor defined")
312 __repr__ = _swig_repr
314 def write(self, osa_buf):
315 """write(_ostream self, char const * osa_buf)"""
316 return _IMP_pepdock._ostream_write(self, osa_buf)
318 _ostream_swigregister = _IMP_pepdock._ostream_swigregister
319 _ostream_swigregister(_ostream)
322 _IMP_pepdock.IMP_COMPILER_HAS_OVERRIDE_swigconstant(_IMP_pepdock)
323 IMP_COMPILER_HAS_OVERRIDE = _IMP_pepdock.IMP_COMPILER_HAS_OVERRIDE
325 _IMP_pepdock.IMP_COMPILER_HAS_FINAL_swigconstant(_IMP_pepdock)
326 IMP_COMPILER_HAS_FINAL = _IMP_pepdock.IMP_COMPILER_HAS_FINAL
328 _IMP_pepdock.IMP_HAS_NOEXCEPT_swigconstant(_IMP_pepdock)
329 IMP_HAS_NOEXCEPT = _IMP_pepdock.IMP_HAS_NOEXCEPT
332 _IMP_pepdock.IMP_CGAL_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
333 IMP_CGAL_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_CGAL_HAS_BOOST_FILESYSTEM
335 _IMP_pepdock.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
336 IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS
338 _IMP_pepdock.IMP_CGAL_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
339 IMP_CGAL_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_CGAL_HAS_BOOST_RANDOM
341 _IMP_pepdock.IMP_CGAL_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
342 IMP_CGAL_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_CGAL_HAS_BOOST_SYSTEM
344 _IMP_pepdock.IMPCGAL_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
345 IMPCGAL_SHOW_WARNINGS = _IMP_pepdock.IMPCGAL_SHOW_WARNINGS
348 _IMP_pepdock.IMP_ALGEBRA_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
349 IMP_ALGEBRA_HAS_IMP_CGAL = _IMP_pepdock.IMP_ALGEBRA_HAS_IMP_CGAL
351 _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
352 IMP_ALGEBRA_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM
354 _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
355 IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS
357 _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
358 IMP_ALGEBRA_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_RANDOM
360 _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
361 IMP_ALGEBRA_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_ALGEBRA_HAS_BOOST_SYSTEM
363 _IMP_pepdock.IMP_ALGEBRA_HAS_CGAL_swigconstant(_IMP_pepdock)
364 IMP_ALGEBRA_HAS_CGAL = _IMP_pepdock.IMP_ALGEBRA_HAS_CGAL
366 _IMP_pepdock.IMP_ALGEBRA_HAS_ANN_swigconstant(_IMP_pepdock)
367 IMP_ALGEBRA_HAS_ANN = _IMP_pepdock.IMP_ALGEBRA_HAS_ANN
369 _IMP_pepdock.IMPALGEBRA_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
370 IMPALGEBRA_SHOW_WARNINGS = _IMP_pepdock.IMPALGEBRA_SHOW_WARNINGS
373 _IMP_pepdock.IMP_DISPLAY_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
374 IMP_DISPLAY_HAS_IMP_CGAL = _IMP_pepdock.IMP_DISPLAY_HAS_IMP_CGAL
376 _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
377 IMP_DISPLAY_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_FILESYSTEM
379 _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
380 IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS
382 _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
383 IMP_DISPLAY_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_RANDOM
385 _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
386 IMP_DISPLAY_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_DISPLAY_HAS_BOOST_SYSTEM
388 _IMP_pepdock.IMP_DISPLAY_HAS_CGAL_swigconstant(_IMP_pepdock)
389 IMP_DISPLAY_HAS_CGAL = _IMP_pepdock.IMP_DISPLAY_HAS_CGAL
391 _IMP_pepdock.IMPDISPLAY_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
392 IMPDISPLAY_SHOW_WARNINGS = _IMP_pepdock.IMPDISPLAY_SHOW_WARNINGS
395 _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
396 IMP_SCORE_FUNCTOR_HAS_IMP_CGAL = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL
398 _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
399 IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM
401 _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
402 IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS
404 _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
405 IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM
407 _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
408 IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM
410 _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_CGAL_swigconstant(_IMP_pepdock)
411 IMP_SCORE_FUNCTOR_HAS_CGAL = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_CGAL
413 _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_HDF5_swigconstant(_IMP_pepdock)
414 IMP_SCORE_FUNCTOR_HAS_HDF5 = _IMP_pepdock.IMP_SCORE_FUNCTOR_HAS_HDF5
416 _IMP_pepdock.IMPSCOREFUNCTOR_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
417 IMPSCOREFUNCTOR_SHOW_WARNINGS = _IMP_pepdock.IMPSCOREFUNCTOR_SHOW_WARNINGS
420 _IMP_pepdock.IMP_STATISTICS_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
421 IMP_STATISTICS_HAS_IMP_CGAL = _IMP_pepdock.IMP_STATISTICS_HAS_IMP_CGAL
423 _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
424 IMP_STATISTICS_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_FILESYSTEM
426 _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
427 IMP_STATISTICS_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_PROGRAMOPTIONS
429 _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
430 IMP_STATISTICS_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_RANDOM
432 _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
433 IMP_STATISTICS_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_STATISTICS_HAS_BOOST_SYSTEM
435 _IMP_pepdock.IMP_STATISTICS_HAS_CGAL_swigconstant(_IMP_pepdock)
436 IMP_STATISTICS_HAS_CGAL = _IMP_pepdock.IMP_STATISTICS_HAS_CGAL
438 _IMP_pepdock.IMPSTATISTICS_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
439 IMPSTATISTICS_SHOW_WARNINGS = _IMP_pepdock.IMPSTATISTICS_SHOW_WARNINGS
442 _IMP_pepdock.IMP_CORE_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
443 IMP_CORE_HAS_IMP_CGAL = _IMP_pepdock.IMP_CORE_HAS_IMP_CGAL
445 _IMP_pepdock.IMP_CORE_HAS_IMP_KERNEL_swigconstant(_IMP_pepdock)
446 IMP_CORE_HAS_IMP_KERNEL = _IMP_pepdock.IMP_CORE_HAS_IMP_KERNEL
448 _IMP_pepdock.IMP_CORE_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
449 IMP_CORE_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_CORE_HAS_BOOST_FILESYSTEM
451 _IMP_pepdock.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
452 IMP_CORE_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS
454 _IMP_pepdock.IMP_CORE_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
455 IMP_CORE_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_CORE_HAS_BOOST_RANDOM
457 _IMP_pepdock.IMP_CORE_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
458 IMP_CORE_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_CORE_HAS_BOOST_SYSTEM
460 _IMP_pepdock.IMP_CORE_HAS_CGAL_swigconstant(_IMP_pepdock)
461 IMP_CORE_HAS_CGAL = _IMP_pepdock.IMP_CORE_HAS_CGAL
463 _IMP_pepdock.IMP_CORE_HAS_HDF5_swigconstant(_IMP_pepdock)
464 IMP_CORE_HAS_HDF5 = _IMP_pepdock.IMP_CORE_HAS_HDF5
466 _IMP_pepdock.IMPCORE_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
467 IMPCORE_SHOW_WARNINGS = _IMP_pepdock.IMPCORE_SHOW_WARNINGS
470 _IMP_pepdock.IMP_CONTAINER_HAS_IMP_ALGEBRA_swigconstant(_IMP_pepdock)
471 IMP_CONTAINER_HAS_IMP_ALGEBRA = _IMP_pepdock.IMP_CONTAINER_HAS_IMP_ALGEBRA
473 _IMP_pepdock.IMP_CONTAINER_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
474 IMP_CONTAINER_HAS_IMP_CGAL = _IMP_pepdock.IMP_CONTAINER_HAS_IMP_CGAL
476 _IMP_pepdock.IMP_CONTAINER_HAS_IMP_DISPLAY_swigconstant(_IMP_pepdock)
477 IMP_CONTAINER_HAS_IMP_DISPLAY = _IMP_pepdock.IMP_CONTAINER_HAS_IMP_DISPLAY
479 _IMP_pepdock.IMP_CONTAINER_HAS_IMP_KERNEL_swigconstant(_IMP_pepdock)
480 IMP_CONTAINER_HAS_IMP_KERNEL = _IMP_pepdock.IMP_CONTAINER_HAS_IMP_KERNEL
482 _IMP_pepdock.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_pepdock)
483 IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR = _IMP_pepdock.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR
485 _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
486 IMP_CONTAINER_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_FILESYSTEM
488 _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
489 IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS
491 _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
492 IMP_CONTAINER_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_RANDOM
494 _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
495 IMP_CONTAINER_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_CONTAINER_HAS_BOOST_SYSTEM
497 _IMP_pepdock.IMP_CONTAINER_HAS_CGAL_swigconstant(_IMP_pepdock)
498 IMP_CONTAINER_HAS_CGAL = _IMP_pepdock.IMP_CONTAINER_HAS_CGAL
500 _IMP_pepdock.IMP_CONTAINER_HAS_HDF5_swigconstant(_IMP_pepdock)
501 IMP_CONTAINER_HAS_HDF5 = _IMP_pepdock.IMP_CONTAINER_HAS_HDF5
503 _IMP_pepdock.IMPCONTAINER_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
504 IMPCONTAINER_SHOW_WARNINGS = _IMP_pepdock.IMPCONTAINER_SHOW_WARNINGS
507 _IMP_pepdock.IMP_ATOM_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
508 IMP_ATOM_HAS_IMP_CGAL = _IMP_pepdock.IMP_ATOM_HAS_IMP_CGAL
510 _IMP_pepdock.IMP_ATOM_HAS_IMP_KERNEL_swigconstant(_IMP_pepdock)
511 IMP_ATOM_HAS_IMP_KERNEL = _IMP_pepdock.IMP_ATOM_HAS_IMP_KERNEL
513 _IMP_pepdock.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_pepdock)
514 IMP_ATOM_HAS_IMP_SCORE_FUNCTOR = _IMP_pepdock.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR
516 _IMP_pepdock.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
517 IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS
519 _IMP_pepdock.IMP_ATOM_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
520 IMP_ATOM_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_ATOM_HAS_BOOST_RANDOM
522 _IMP_pepdock.IMP_ATOM_HAS_BOOST_REGEX_swigconstant(_IMP_pepdock)
523 IMP_ATOM_HAS_BOOST_REGEX = _IMP_pepdock.IMP_ATOM_HAS_BOOST_REGEX
525 _IMP_pepdock.IMP_ATOM_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
526 IMP_ATOM_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_ATOM_HAS_BOOST_SYSTEM
528 _IMP_pepdock.IMP_ATOM_HAS_CGAL_swigconstant(_IMP_pepdock)
529 IMP_ATOM_HAS_CGAL = _IMP_pepdock.IMP_ATOM_HAS_CGAL
531 _IMP_pepdock.IMP_ATOM_HAS_HDF5_swigconstant(_IMP_pepdock)
532 IMP_ATOM_HAS_HDF5 = _IMP_pepdock.IMP_ATOM_HAS_HDF5
534 _IMP_pepdock.IMPATOM_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
535 IMPATOM_SHOW_WARNINGS = _IMP_pepdock.IMPATOM_SHOW_WARNINGS
537 _IMP_pepdock.IMP_ATOM_TYPE_INDEX_swigconstant(_IMP_pepdock)
538 IMP_ATOM_TYPE_INDEX = _IMP_pepdock.IMP_ATOM_TYPE_INDEX
540 _IMP_pepdock.IMP_RESIDUE_TYPE_INDEX_swigconstant(_IMP_pepdock)
541 IMP_RESIDUE_TYPE_INDEX = _IMP_pepdock.IMP_RESIDUE_TYPE_INDEX
543 _IMP_pepdock.IMP_HIERARCHY_TYPE_INDEX_swigconstant(_IMP_pepdock)
544 IMP_HIERARCHY_TYPE_INDEX = _IMP_pepdock.IMP_HIERARCHY_TYPE_INDEX
547 _IMP_pepdock.IMP_RMF_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
548 IMP_RMF_HAS_IMP_CGAL = _IMP_pepdock.IMP_RMF_HAS_IMP_CGAL
550 _IMP_pepdock.IMP_RMF_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_pepdock)
551 IMP_RMF_HAS_IMP_SCORE_FUNCTOR = _IMP_pepdock.IMP_RMF_HAS_IMP_SCORE_FUNCTOR
553 _IMP_pepdock.IMP_RMF_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
554 IMP_RMF_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_RMF_HAS_BOOST_FILESYSTEM
556 _IMP_pepdock.IMP_RMF_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
557 IMP_RMF_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_RMF_HAS_BOOST_PROGRAMOPTIONS
559 _IMP_pepdock.IMP_RMF_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
560 IMP_RMF_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_RMF_HAS_BOOST_RANDOM
562 _IMP_pepdock.IMP_RMF_HAS_BOOST_REGEX_swigconstant(_IMP_pepdock)
563 IMP_RMF_HAS_BOOST_REGEX = _IMP_pepdock.IMP_RMF_HAS_BOOST_REGEX
565 _IMP_pepdock.IMP_RMF_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
566 IMP_RMF_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_RMF_HAS_BOOST_SYSTEM
568 _IMP_pepdock.IMP_RMF_HAS_CGAL_swigconstant(_IMP_pepdock)
569 IMP_RMF_HAS_CGAL = _IMP_pepdock.IMP_RMF_HAS_CGAL
571 _IMP_pepdock.IMP_RMF_HAS_HDF5_swigconstant(_IMP_pepdock)
572 IMP_RMF_HAS_HDF5 = _IMP_pepdock.IMP_RMF_HAS_HDF5
574 _IMP_pepdock.IMPRMF_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
575 IMPRMF_SHOW_WARNINGS = _IMP_pepdock.IMPRMF_SHOW_WARNINGS
579 _IMP_pepdock.IMP_DOMINO_HAS_IMP_ATOM_swigconstant(_IMP_pepdock)
580 IMP_DOMINO_HAS_IMP_ATOM = _IMP_pepdock.IMP_DOMINO_HAS_IMP_ATOM
582 _IMP_pepdock.IMP_DOMINO_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
583 IMP_DOMINO_HAS_IMP_CGAL = _IMP_pepdock.IMP_DOMINO_HAS_IMP_CGAL
585 _IMP_pepdock.IMP_DOMINO_HAS_IMP_KERNEL_swigconstant(_IMP_pepdock)
586 IMP_DOMINO_HAS_IMP_KERNEL = _IMP_pepdock.IMP_DOMINO_HAS_IMP_KERNEL
588 _IMP_pepdock.IMP_DOMINO_HAS_IMP_RMF_swigconstant(_IMP_pepdock)
589 IMP_DOMINO_HAS_IMP_RMF = _IMP_pepdock.IMP_DOMINO_HAS_IMP_RMF
591 _IMP_pepdock.IMP_DOMINO_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_pepdock)
592 IMP_DOMINO_HAS_IMP_SCORE_FUNCTOR = _IMP_pepdock.IMP_DOMINO_HAS_IMP_SCORE_FUNCTOR
594 _IMP_pepdock.IMP_DOMINO_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
595 IMP_DOMINO_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_DOMINO_HAS_BOOST_FILESYSTEM
597 _IMP_pepdock.IMP_DOMINO_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
598 IMP_DOMINO_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_DOMINO_HAS_BOOST_PROGRAMOPTIONS
600 _IMP_pepdock.IMP_DOMINO_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
601 IMP_DOMINO_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_DOMINO_HAS_BOOST_RANDOM
603 _IMP_pepdock.IMP_DOMINO_HAS_BOOST_REGEX_swigconstant(_IMP_pepdock)
604 IMP_DOMINO_HAS_BOOST_REGEX = _IMP_pepdock.IMP_DOMINO_HAS_BOOST_REGEX
606 _IMP_pepdock.IMP_DOMINO_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
607 IMP_DOMINO_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_DOMINO_HAS_BOOST_SYSTEM
609 _IMP_pepdock.IMP_DOMINO_HAS_CGAL_swigconstant(_IMP_pepdock)
610 IMP_DOMINO_HAS_CGAL = _IMP_pepdock.IMP_DOMINO_HAS_CGAL
612 _IMP_pepdock.IMP_DOMINO_HAS_HDF5_swigconstant(_IMP_pepdock)
613 IMP_DOMINO_HAS_HDF5 = _IMP_pepdock.IMP_DOMINO_HAS_HDF5
615 _IMP_pepdock.IMP_DOMINO_HAS_RMF_swigconstant(_IMP_pepdock)
616 IMP_DOMINO_HAS_RMF = _IMP_pepdock.IMP_DOMINO_HAS_RMF
618 _IMP_pepdock.IMPDOMINO_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
619 IMPDOMINO_SHOW_WARNINGS = _IMP_pepdock.IMPDOMINO_SHOW_WARNINGS
623 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_ALGEBRA_swigconstant(_IMP_pepdock)
624 IMP_PEPDOCK_HAS_IMP_ALGEBRA = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_ALGEBRA
626 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_ATOM_swigconstant(_IMP_pepdock)
627 IMP_PEPDOCK_HAS_IMP_ATOM = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_ATOM
629 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_CGAL_swigconstant(_IMP_pepdock)
630 IMP_PEPDOCK_HAS_IMP_CGAL = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_CGAL
632 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_DISPLAY_swigconstant(_IMP_pepdock)
633 IMP_PEPDOCK_HAS_IMP_DISPLAY = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_DISPLAY
635 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_KERNEL_swigconstant(_IMP_pepdock)
636 IMP_PEPDOCK_HAS_IMP_KERNEL = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_KERNEL
638 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_RMF_swigconstant(_IMP_pepdock)
639 IMP_PEPDOCK_HAS_IMP_RMF = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_RMF
641 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_pepdock)
642 IMP_PEPDOCK_HAS_IMP_SCORE_FUNCTOR = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_SCORE_FUNCTOR
644 _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_STATISTICS_swigconstant(_IMP_pepdock)
645 IMP_PEPDOCK_HAS_IMP_STATISTICS = _IMP_pepdock.IMP_PEPDOCK_HAS_IMP_STATISTICS
647 _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_pepdock)
648 IMP_PEPDOCK_HAS_BOOST_FILESYSTEM = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_FILESYSTEM
650 _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_GRAPH_swigconstant(_IMP_pepdock)
651 IMP_PEPDOCK_HAS_BOOST_GRAPH = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_GRAPH
653 _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_pepdock)
654 IMP_PEPDOCK_HAS_BOOST_PROGRAMOPTIONS = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_PROGRAMOPTIONS
656 _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_RANDOM_swigconstant(_IMP_pepdock)
657 IMP_PEPDOCK_HAS_BOOST_RANDOM = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_RANDOM
659 _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_REGEX_swigconstant(_IMP_pepdock)
660 IMP_PEPDOCK_HAS_BOOST_REGEX = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_REGEX
662 _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_SYSTEM_swigconstant(_IMP_pepdock)
663 IMP_PEPDOCK_HAS_BOOST_SYSTEM = _IMP_pepdock.IMP_PEPDOCK_HAS_BOOST_SYSTEM
665 _IMP_pepdock.IMP_PEPDOCK_HAS_CGAL_swigconstant(_IMP_pepdock)
666 IMP_PEPDOCK_HAS_CGAL = _IMP_pepdock.IMP_PEPDOCK_HAS_CGAL
668 _IMP_pepdock.IMP_PEPDOCK_HAS_HDF5_swigconstant(_IMP_pepdock)
669 IMP_PEPDOCK_HAS_HDF5 = _IMP_pepdock.IMP_PEPDOCK_HAS_HDF5
671 _IMP_pepdock.IMP_PEPDOCK_HAS_RMF_swigconstant(_IMP_pepdock)
672 IMP_PEPDOCK_HAS_RMF = _IMP_pepdock.IMP_PEPDOCK_HAS_RMF
674 _IMP_pepdock.IMPPEPDOCK_SHOW_WARNINGS_swigconstant(_IMP_pepdock)
675 IMPPEPDOCK_SHOW_WARNINGS = _IMP_pepdock.IMPPEPDOCK_SHOW_WARNINGS
677 def get_module_version():
678 """get_module_version() -> std::string const"""
679 return _IMP_pepdock.get_module_version()
682 """get_example_path(std::string fname) -> std::string"""
683 return _IMP_pepdock.get_example_path(fname)
686 """get_data_path(std::string fname) -> std::string"""
687 return _IMP_pepdock.get_data_path(fname)
689 from .
import _version_check
690 _version_check.check_version(get_module_version())
691 __version__ = get_module_version()
std::string get_data_path(std::string file_name)
Return the full path to one of this module's data files.
Various classes to hold sets of particles.
Make CGAL functionality available to IMP.
Composable functors to implement scores via compile-time composition.
Code to compute statistical measures.
std::string get_example_path(std::string file_name)
Return the full path to one of this module's example files.
Basic functionality that is expected to be used by a wide variety of IMP users.
General purpose algebraic and geometric methods that are expected to be used by a wide variety of IMP...
Output IMP model data in various file formats.
Functionality for loading, creating, manipulating and scoring atomic structures.
Support for the RMF file format for storing hierarchical molecular data and markup.
Divide-and-conquer inferential optimization in discrete space.