42 pa = r.add_type([ds[0], ds[1]])
43 pb = r.add_type([ds[2], ds[3]])
44 pc = r.add_type([ds[4]])
45 pd = r.add_type([ds[5]])
51 i1 = r.add_composite([pa, pa, pb, pb, pc])
52 i2 = r.add_composite([pa, pb, pb, pc], i1)
53 i3 = r.add_composite([pa, pa, pb, pb], i1)
54 i4 = r.add_composite([pa, pb], i1)
55 i5 = r.add_composite([pa, pb, pb], i2)
56 i6 = r.add_composite([pb, pc], i2)
57 i7 = r.add_composite([pa, pa, pb], i3)
58 i8 = r.add_composite([pa, pb], i5)
Strings setup_from_argv(const Strings &argv, std::string description, std::string positional_description, int num_positional)
Upper bound harmonic function (non-zero when feature > mean)
static XYZ setup_particle(Model *m, ParticleIndex pi)
Class for storing model, its restraints, constraints, and particles.
Basic functionality that is expected to be used by a wide variety of IMP users.
General purpose algebraic and geometric methods that are expected to be used by a wide variety of IMP...
Class to handle individual model particles.
Ensure that a set of particles remains connected with one another.