31 o.set_scoring_function([evr])
Lower bound harmonic function (non-zero when feature < mean)
Strings setup_from_argv(const Strings &argv, std::string description, std::string positional_description, int num_positional)
Various classes to hold sets of particles.
XYZRs create_xyzr_particles(Model *m, unsigned int num, Float radius, Float box_side=10)
Create a set of particles with random coordinates.
Simple conjugate gradients optimizer.
A score on the distance between the surfaces of two spheres.
Return all close ordered pairs of particles taken from the two SingletonContainers.
Class for storing model, its restraints, constraints, and particles.
Store a list of ParticleIndexes.
Basic functionality that is expected to be used by a wide variety of IMP users.
Applies a PairScore to each Pair in a list.