IMP Manual
for IMP version 2.6.1
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We build and test IMP on Windows, built with the Microsoft Visual Studio compilers (we use Visual Studio Express 2010 SP1 for 32-bit Windows, and VS Express 2012 for 64-bit). One complication is that different packages are compiled with different versions of Visual Studio, and mixing the different runtimes (msvc*.dll) can cause odd behavior; therefore, we recommend building most of the dependencies from source code using the same version of Visual Studio that you're going to use to build IMP. The basic procedure is as follows:
C:\Program Files\GnuWin32
. The sources, however, must be installed in a path that doesn't contain spaces (otherwise the Boost build will fail). We chose C:\zlib
.C:\Program Files\boost_1_53_0
), thenset INCLUDE=C:\Program Files\GnuWin32\include
bjam link=shared runtime-link=shared -sNO_ZLIB=0 -sZLIB_SOURCE=C:\zlib\1.2.3\zlib-1.2.3
cmake.exe -G "Visual Studio 10" -DHDF5_ENABLE_SZIP_SUPPORT:BOOL=OFF -DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=ON -DHDF5_BUILD_HL_LIB:BOOL=ON -DZLIB_INCLUDE_DIR="C:\Program Files\GnuWin32\include" -DZLIB_LIBRARY="C:\Program Files\GnuWin32\lib\zlib.lib" -DBUILD_SHARED_LIBS:BOOL=ON ..
libfftw3-3.lib
to fftw3.lib
to help cmake find itsrc\gsl\1.8\gsl-1.8\VC8
subdirectorylibgsl.dll
and libgslcblas.dll
to a suitable location (we used C:\Program Files\gsl-1.8\lib
)libTAU.lib
to TAU.lib
to help cmake find it.opencv_*.lib
to a similar file without the version extension (e.g. copy opencv_ml244.lib
to opencv_ml.lib
) to help cmake find itSet up IMP by running something similar to
cmake <imp_source_directory> -DCMAKE_BUILD_TYPE=Release -DCMAKE_CXX_FLAGS="/DBOOST_ALL_DYN_LINK /EHsc /D_HDF5USEDLL_ /DWIN32 /DGSL_DLL" -G "NMake Makefiles"
/bigobj
to CMAKE_CXX_CFLAGS
.setup_environment.bat
file to set up the environment so all the programs and Python modules can be found. (This batch file needs to be run only once, not for each test.)