IMP logo
IMP Reference Guide  2.5.0
The Integrative Modeling Platform
foxs/__init__.py
1 # This file was automatically generated by SWIG (http://www.swig.org).
2 # Version 3.0.5
3 #
4 # Do not make changes to this file unless you know what you are doing--modify
5 # the SWIG interface file instead.
6 
7 # This wrapper is part of IMP,
8 # Copyright 2007-2015 IMP Inventors. All rights reserved.
9 
10 from __future__ import print_function, division, absolute_import
11 
12 
13 
14 
15 from sys import version_info
16 if version_info >= (2, 6, 0):
17  def swig_import_helper():
18  from os.path import dirname
19  import imp
20  fp = None
21  try:
22  fp, pathname, description = imp.find_module('_IMP_foxs', [dirname(__file__)])
23  except ImportError:
24  import _IMP_foxs
25  return _IMP_foxs
26  if fp is not None:
27  try:
28  _mod = imp.load_module('_IMP_foxs', fp, pathname, description)
29  finally:
30  fp.close()
31  return _mod
32  _IMP_foxs = swig_import_helper()
33  del swig_import_helper
34 else:
35  import _IMP_foxs
36 del version_info
37 try:
38  _swig_property = property
39 except NameError:
40  pass # Python < 2.2 doesn't have 'property'.
41 
42 
43 def _swig_setattr_nondynamic(self, class_type, name, value, static=1):
44  if (name == "thisown"):
45  return self.this.own(value)
46  if (name == "this"):
47  if type(value).__name__ == 'SwigPyObject':
48  self.__dict__[name] = value
49  return
50  method = class_type.__swig_setmethods__.get(name, None)
51  if method:
52  return method(self, value)
53  if (not static):
54  object.__setattr__(self, name, value)
55  else:
56  raise AttributeError("You cannot add attributes to %s" % self)
57 
58 
59 def _swig_setattr(self, class_type, name, value):
60  return _swig_setattr_nondynamic(self, class_type, name, value, 0)
61 
62 
63 def _swig_getattr_nondynamic(self, class_type, name, static=1):
64  if (name == "thisown"):
65  return self.this.own()
66  method = class_type.__swig_getmethods__.get(name, None)
67  if method:
68  return method(self)
69  if (not static):
70  return object.__getattr__(self, name)
71  else:
72  raise AttributeError(name)
73 
74 def _swig_getattr(self, class_type, name):
75  return _swig_getattr_nondynamic(self, class_type, name, 0)
76 
77 
78 def _swig_repr(self):
79  try:
80  strthis = "proxy of " + self.this.__repr__()
81  except:
82  strthis = ""
83  return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
84 
85 try:
86  _object = object
87  _newclass = 1
88 except AttributeError:
89  class _object:
90  pass
91  _newclass = 0
92 
93 
94 
95 def _swig_setattr_nondynamic_method(set):
96  def set_attr(self, name, value):
97  if (name == "thisown"):
98  return self.this.own(value)
99  if hasattr(self, name) or (name == "this"):
100  set(self, name, value)
101  else:
102  raise AttributeError("You cannot add attributes to %s" % self)
103  return set_attr
104 
105 
106 try:
107  import weakref
108  weakref_proxy = weakref.proxy
109 except:
110  weakref_proxy = lambda x: x
111 
112 
113 class IMP_FOXS_SwigPyIterator(object):
114  """Proxy of C++ swig::IMP_FOXS_SwigPyIterator class"""
115  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
116 
117  def __init__(self, *args, **kwargs):
118  raise AttributeError("No constructor defined - class is abstract")
119  __repr__ = _swig_repr
120  __swig_destroy__ = _IMP_foxs.delete_IMP_FOXS_SwigPyIterator
121  __del__ = lambda self: None
122 
123  def value(self):
124  """value(IMP_FOXS_SwigPyIterator self) -> PyObject *"""
125  return _IMP_foxs.IMP_FOXS_SwigPyIterator_value(self)
126 
127 
128  def incr(self, n=1):
129  """
130  incr(IMP_FOXS_SwigPyIterator self, size_t n=1) -> IMP_FOXS_SwigPyIterator
131  incr(IMP_FOXS_SwigPyIterator self) -> IMP_FOXS_SwigPyIterator
132  """
133  return _IMP_foxs.IMP_FOXS_SwigPyIterator_incr(self, n)
134 
135 
136  def decr(self, n=1):
137  """
138  decr(IMP_FOXS_SwigPyIterator self, size_t n=1) -> IMP_FOXS_SwigPyIterator
139  decr(IMP_FOXS_SwigPyIterator self) -> IMP_FOXS_SwigPyIterator
140  """
141  return _IMP_foxs.IMP_FOXS_SwigPyIterator_decr(self, n)
142 
143 
144  def distance(self, x):
145  """distance(IMP_FOXS_SwigPyIterator self, IMP_FOXS_SwigPyIterator x) -> ptrdiff_t"""
146  return _IMP_foxs.IMP_FOXS_SwigPyIterator_distance(self, x)
147 
148 
149  def equal(self, x):
150  """equal(IMP_FOXS_SwigPyIterator self, IMP_FOXS_SwigPyIterator x) -> bool"""
151  return _IMP_foxs.IMP_FOXS_SwigPyIterator_equal(self, x)
152 
153 
154  def copy(self):
155  """copy(IMP_FOXS_SwigPyIterator self) -> IMP_FOXS_SwigPyIterator"""
156  return _IMP_foxs.IMP_FOXS_SwigPyIterator_copy(self)
157 
158 
159  def next(self):
160  """next(IMP_FOXS_SwigPyIterator self) -> PyObject *"""
161  return _IMP_foxs.IMP_FOXS_SwigPyIterator_next(self)
162 
163 
164  def __next__(self):
165  """__next__(IMP_FOXS_SwigPyIterator self) -> PyObject *"""
166  return _IMP_foxs.IMP_FOXS_SwigPyIterator___next__(self)
167 
168 
169  def previous(self):
170  """previous(IMP_FOXS_SwigPyIterator self) -> PyObject *"""
171  return _IMP_foxs.IMP_FOXS_SwigPyIterator_previous(self)
172 
173 
174  def advance(self, n):
175  """advance(IMP_FOXS_SwigPyIterator self, ptrdiff_t n) -> IMP_FOXS_SwigPyIterator"""
176  return _IMP_foxs.IMP_FOXS_SwigPyIterator_advance(self, n)
177 
178 
179  def __eq__(self, x):
180  """__eq__(IMP_FOXS_SwigPyIterator self, IMP_FOXS_SwigPyIterator x) -> bool"""
181  return _IMP_foxs.IMP_FOXS_SwigPyIterator___eq__(self, x)
182 
183 
184  def __ne__(self, x):
185  """__ne__(IMP_FOXS_SwigPyIterator self, IMP_FOXS_SwigPyIterator x) -> bool"""
186  return _IMP_foxs.IMP_FOXS_SwigPyIterator___ne__(self, x)
187 
188 
189  def __iadd__(self, n):
190  """__iadd__(IMP_FOXS_SwigPyIterator self, ptrdiff_t n) -> IMP_FOXS_SwigPyIterator"""
191  return _IMP_foxs.IMP_FOXS_SwigPyIterator___iadd__(self, n)
192 
193 
194  def __isub__(self, n):
195  """__isub__(IMP_FOXS_SwigPyIterator self, ptrdiff_t n) -> IMP_FOXS_SwigPyIterator"""
196  return _IMP_foxs.IMP_FOXS_SwigPyIterator___isub__(self, n)
197 
198 
199  def __add__(self, n):
200  """__add__(IMP_FOXS_SwigPyIterator self, ptrdiff_t n) -> IMP_FOXS_SwigPyIterator"""
201  return _IMP_foxs.IMP_FOXS_SwigPyIterator___add__(self, n)
202 
203 
204  def __sub__(self, *args):
205  """
206  __sub__(IMP_FOXS_SwigPyIterator self, ptrdiff_t n) -> IMP_FOXS_SwigPyIterator
207  __sub__(IMP_FOXS_SwigPyIterator self, IMP_FOXS_SwigPyIterator x) -> ptrdiff_t
208  """
209  return _IMP_foxs.IMP_FOXS_SwigPyIterator___sub__(self, *args)
210 
211  def __iter__(self):
212  return self
213 IMP_FOXS_SwigPyIterator_swigregister = _IMP_foxs.IMP_FOXS_SwigPyIterator_swigregister
214 IMP_FOXS_SwigPyIterator_swigregister(IMP_FOXS_SwigPyIterator)
215 
216 _value_types=[]
217 _object_types=[]
218 _raii_types=[]
219 _plural_types=[]
220 
221 
222 _IMP_foxs.IMP_DEBUG_swigconstant(_IMP_foxs)
223 IMP_DEBUG = _IMP_foxs.IMP_DEBUG
224 
225 _IMP_foxs.IMP_RELEASE_swigconstant(_IMP_foxs)
226 IMP_RELEASE = _IMP_foxs.IMP_RELEASE
227 
228 _IMP_foxs.IMP_SILENT_swigconstant(_IMP_foxs)
229 IMP_SILENT = _IMP_foxs.IMP_SILENT
230 
231 _IMP_foxs.IMP_PROGRESS_swigconstant(_IMP_foxs)
232 IMP_PROGRESS = _IMP_foxs.IMP_PROGRESS
233 
234 _IMP_foxs.IMP_TERSE_swigconstant(_IMP_foxs)
235 IMP_TERSE = _IMP_foxs.IMP_TERSE
236 
237 _IMP_foxs.IMP_VERBOSE_swigconstant(_IMP_foxs)
238 IMP_VERBOSE = _IMP_foxs.IMP_VERBOSE
239 
240 _IMP_foxs.IMP_MEMORY_swigconstant(_IMP_foxs)
241 IMP_MEMORY = _IMP_foxs.IMP_MEMORY
242 
243 _IMP_foxs.IMP_NONE_swigconstant(_IMP_foxs)
244 IMP_NONE = _IMP_foxs.IMP_NONE
245 
246 _IMP_foxs.IMP_USAGE_swigconstant(_IMP_foxs)
247 IMP_USAGE = _IMP_foxs.IMP_USAGE
248 
249 _IMP_foxs.IMP_INTERNAL_swigconstant(_IMP_foxs)
250 IMP_INTERNAL = _IMP_foxs.IMP_INTERNAL
251 
252 _IMP_foxs.IMP_KERNEL_HAS_LOG4CXX_swigconstant(_IMP_foxs)
253 IMP_KERNEL_HAS_LOG4CXX = _IMP_foxs.IMP_KERNEL_HAS_LOG4CXX
254 
255 _IMP_foxs.IMP_COMPILER_HAS_AUTO_swigconstant(_IMP_foxs)
256 IMP_COMPILER_HAS_AUTO = _IMP_foxs.IMP_COMPILER_HAS_AUTO
257 
258 _IMP_foxs.IMP_COMPILER_HAS_DEBUG_VECTOR_swigconstant(_IMP_foxs)
259 IMP_COMPILER_HAS_DEBUG_VECTOR = _IMP_foxs.IMP_COMPILER_HAS_DEBUG_VECTOR
260 
261 _IMP_foxs.IMP_KERNEL_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
262 IMP_KERNEL_HAS_BOOST_RANDOM = _IMP_foxs.IMP_KERNEL_HAS_BOOST_RANDOM
263 
264 _IMP_foxs.IMP_KERNEL_HAS_GPERFTOOLS_swigconstant(_IMP_foxs)
265 IMP_KERNEL_HAS_GPERFTOOLS = _IMP_foxs.IMP_KERNEL_HAS_GPERFTOOLS
266 
267 _IMP_foxs.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER_swigconstant(_IMP_foxs)
268 IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER = _IMP_foxs.IMP_KERNEL_HAS_TCMALLOC_HEAPCHECKER
269 
270 _IMP_foxs.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER_swigconstant(_IMP_foxs)
271 IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER = _IMP_foxs.IMP_KERNEL_HAS_TCMALLOC_HEAPPROFILER
272 
273 _IMP_foxs.IMPKERNEL_SHOW_WARNINGS_swigconstant(_IMP_foxs)
274 IMPKERNEL_SHOW_WARNINGS = _IMP_foxs.IMPKERNEL_SHOW_WARNINGS
275 import sys
276 class _DirectorObjects(object):
277  """@internal Simple class to keep references to director objects
278  to prevent premature deletion."""
279  def __init__(self):
280  self._objects = []
281  def register(self, obj):
282  """Take a reference to a director object; will only work for
283  refcounted C++ classes"""
284  if hasattr(obj, 'get_ref_count'):
285  self._objects.append(obj)
286  def cleanup(self):
287  """Only drop our reference and allow cleanup by Python if no other
288  Python references exist (we hold 3 references: one in self._objects,
289  one in x, and one in the argument list for getrefcount) *and* no
290  other C++ references exist (the Python object always holds one)"""
291  objs = [x for x in self._objects if sys.getrefcount(x) > 3 \
292  or x.get_ref_count() > 1]
293  # Do in two steps so the references are kept until the end of the
294  # function (deleting references may trigger a fresh call to this method)
295  self._objects = objs
296  def get_object_count(self):
297  """Get number of director objects (useful for testing only)"""
298  return len(self._objects)
299 _director_objects = _DirectorObjects()
300 
301 class _ostream(object):
302  """Proxy of C++ std::ostream class"""
303  thisown = _swig_property(lambda x: x.this.own(), lambda x, v: x.this.own(v), doc='The membership flag')
304 
305  def __init__(self, *args, **kwargs):
306  raise AttributeError("No constructor defined")
307  __repr__ = _swig_repr
308 
309  def write(self, osa_buf):
310  """write(_ostream self, char const * osa_buf)"""
311  return _IMP_foxs._ostream_write(self, osa_buf)
312 
313 _ostream_swigregister = _IMP_foxs._ostream_swigregister
314 _ostream_swigregister(_ostream)
315 
316 
317 _IMP_foxs.IMP_COMPILER_HAS_OVERRIDE_swigconstant(_IMP_foxs)
318 IMP_COMPILER_HAS_OVERRIDE = _IMP_foxs.IMP_COMPILER_HAS_OVERRIDE
319 
320 _IMP_foxs.IMP_COMPILER_HAS_FINAL_swigconstant(_IMP_foxs)
321 IMP_COMPILER_HAS_FINAL = _IMP_foxs.IMP_COMPILER_HAS_FINAL
322 
323 _IMP_foxs.IMP_HAS_NOEXCEPT_swigconstant(_IMP_foxs)
324 IMP_HAS_NOEXCEPT = _IMP_foxs.IMP_HAS_NOEXCEPT
325 import IMP
326 
327 _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
328 IMP_BENCHMARK_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_FILESYSTEM
329 
330 _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
331 IMP_BENCHMARK_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_PROGRAMOPTIONS
332 
333 _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
334 IMP_BENCHMARK_HAS_BOOST_RANDOM = _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_RANDOM
335 
336 _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
337 IMP_BENCHMARK_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_BENCHMARK_HAS_BOOST_SYSTEM
338 
339 _IMP_foxs.IMPBENCHMARK_SHOW_WARNINGS_swigconstant(_IMP_foxs)
340 IMPBENCHMARK_SHOW_WARNINGS = _IMP_foxs.IMPBENCHMARK_SHOW_WARNINGS
341 import IMP.benchmark
342 
343 _IMP_foxs.IMP_CGAL_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
344 IMP_CGAL_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_CGAL_HAS_BOOST_FILESYSTEM
345 
346 _IMP_foxs.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
347 IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_CGAL_HAS_BOOST_PROGRAMOPTIONS
348 
349 _IMP_foxs.IMP_CGAL_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
350 IMP_CGAL_HAS_BOOST_RANDOM = _IMP_foxs.IMP_CGAL_HAS_BOOST_RANDOM
351 
352 _IMP_foxs.IMP_CGAL_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
353 IMP_CGAL_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_CGAL_HAS_BOOST_SYSTEM
354 
355 _IMP_foxs.IMPCGAL_SHOW_WARNINGS_swigconstant(_IMP_foxs)
356 IMPCGAL_SHOW_WARNINGS = _IMP_foxs.IMPCGAL_SHOW_WARNINGS
357 import IMP.cgal
358 
359 _IMP_foxs.IMP_ALGEBRA_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
360 IMP_ALGEBRA_HAS_IMP_CGAL = _IMP_foxs.IMP_ALGEBRA_HAS_IMP_CGAL
361 
362 _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
363 IMP_ALGEBRA_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_FILESYSTEM
364 
365 _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
366 IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_PROGRAMOPTIONS
367 
368 _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
369 IMP_ALGEBRA_HAS_BOOST_RANDOM = _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_RANDOM
370 
371 _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
372 IMP_ALGEBRA_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_ALGEBRA_HAS_BOOST_SYSTEM
373 
374 _IMP_foxs.IMP_ALGEBRA_HAS_CGAL_swigconstant(_IMP_foxs)
375 IMP_ALGEBRA_HAS_CGAL = _IMP_foxs.IMP_ALGEBRA_HAS_CGAL
376 
377 _IMP_foxs.IMP_ALGEBRA_HAS_ANN_swigconstant(_IMP_foxs)
378 IMP_ALGEBRA_HAS_ANN = _IMP_foxs.IMP_ALGEBRA_HAS_ANN
379 
380 _IMP_foxs.IMPALGEBRA_SHOW_WARNINGS_swigconstant(_IMP_foxs)
381 IMPALGEBRA_SHOW_WARNINGS = _IMP_foxs.IMPALGEBRA_SHOW_WARNINGS
382 import IMP.algebra
383 
384 _IMP_foxs.IMP_DISPLAY_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
385 IMP_DISPLAY_HAS_IMP_CGAL = _IMP_foxs.IMP_DISPLAY_HAS_IMP_CGAL
386 
387 _IMP_foxs.IMP_DISPLAY_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
388 IMP_DISPLAY_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_DISPLAY_HAS_BOOST_FILESYSTEM
389 
390 _IMP_foxs.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
391 IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_DISPLAY_HAS_BOOST_PROGRAMOPTIONS
392 
393 _IMP_foxs.IMP_DISPLAY_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
394 IMP_DISPLAY_HAS_BOOST_RANDOM = _IMP_foxs.IMP_DISPLAY_HAS_BOOST_RANDOM
395 
396 _IMP_foxs.IMP_DISPLAY_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
397 IMP_DISPLAY_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_DISPLAY_HAS_BOOST_SYSTEM
398 
399 _IMP_foxs.IMP_DISPLAY_HAS_CGAL_swigconstant(_IMP_foxs)
400 IMP_DISPLAY_HAS_CGAL = _IMP_foxs.IMP_DISPLAY_HAS_CGAL
401 
402 _IMP_foxs.IMPDISPLAY_SHOW_WARNINGS_swigconstant(_IMP_foxs)
403 IMPDISPLAY_SHOW_WARNINGS = _IMP_foxs.IMPDISPLAY_SHOW_WARNINGS
404 import IMP.display
405 
406 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
407 IMP_SCORE_FUNCTOR_HAS_IMP_CGAL = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_IMP_CGAL
408 
409 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
410 IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_FILESYSTEM
411 
412 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
413 IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_PROGRAMOPTIONS
414 
415 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
416 IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_RANDOM
417 
418 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
419 IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_BOOST_SYSTEM
420 
421 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_CGAL_swigconstant(_IMP_foxs)
422 IMP_SCORE_FUNCTOR_HAS_CGAL = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_CGAL
423 
424 _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_HDF5_swigconstant(_IMP_foxs)
425 IMP_SCORE_FUNCTOR_HAS_HDF5 = _IMP_foxs.IMP_SCORE_FUNCTOR_HAS_HDF5
426 
427 _IMP_foxs.IMPSCOREFUNCTOR_SHOW_WARNINGS_swigconstant(_IMP_foxs)
428 IMPSCOREFUNCTOR_SHOW_WARNINGS = _IMP_foxs.IMPSCOREFUNCTOR_SHOW_WARNINGS
429 import IMP.score_functor
430 
431 _IMP_foxs.IMP_CORE_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
432 IMP_CORE_HAS_IMP_CGAL = _IMP_foxs.IMP_CORE_HAS_IMP_CGAL
433 
434 _IMP_foxs.IMP_CORE_HAS_IMP_KERNEL_swigconstant(_IMP_foxs)
435 IMP_CORE_HAS_IMP_KERNEL = _IMP_foxs.IMP_CORE_HAS_IMP_KERNEL
436 
437 _IMP_foxs.IMP_CORE_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
438 IMP_CORE_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_CORE_HAS_BOOST_FILESYSTEM
439 
440 _IMP_foxs.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
441 IMP_CORE_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_CORE_HAS_BOOST_PROGRAMOPTIONS
442 
443 _IMP_foxs.IMP_CORE_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
444 IMP_CORE_HAS_BOOST_RANDOM = _IMP_foxs.IMP_CORE_HAS_BOOST_RANDOM
445 
446 _IMP_foxs.IMP_CORE_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
447 IMP_CORE_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_CORE_HAS_BOOST_SYSTEM
448 
449 _IMP_foxs.IMP_CORE_HAS_CGAL_swigconstant(_IMP_foxs)
450 IMP_CORE_HAS_CGAL = _IMP_foxs.IMP_CORE_HAS_CGAL
451 
452 _IMP_foxs.IMP_CORE_HAS_HDF5_swigconstant(_IMP_foxs)
453 IMP_CORE_HAS_HDF5 = _IMP_foxs.IMP_CORE_HAS_HDF5
454 
455 _IMP_foxs.IMPCORE_SHOW_WARNINGS_swigconstant(_IMP_foxs)
456 IMPCORE_SHOW_WARNINGS = _IMP_foxs.IMPCORE_SHOW_WARNINGS
457 import IMP.core
458 
459 _IMP_foxs.IMP_CONTAINER_HAS_IMP_ALGEBRA_swigconstant(_IMP_foxs)
460 IMP_CONTAINER_HAS_IMP_ALGEBRA = _IMP_foxs.IMP_CONTAINER_HAS_IMP_ALGEBRA
461 
462 _IMP_foxs.IMP_CONTAINER_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
463 IMP_CONTAINER_HAS_IMP_CGAL = _IMP_foxs.IMP_CONTAINER_HAS_IMP_CGAL
464 
465 _IMP_foxs.IMP_CONTAINER_HAS_IMP_DISPLAY_swigconstant(_IMP_foxs)
466 IMP_CONTAINER_HAS_IMP_DISPLAY = _IMP_foxs.IMP_CONTAINER_HAS_IMP_DISPLAY
467 
468 _IMP_foxs.IMP_CONTAINER_HAS_IMP_KERNEL_swigconstant(_IMP_foxs)
469 IMP_CONTAINER_HAS_IMP_KERNEL = _IMP_foxs.IMP_CONTAINER_HAS_IMP_KERNEL
470 
471 _IMP_foxs.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_foxs)
472 IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR = _IMP_foxs.IMP_CONTAINER_HAS_IMP_SCORE_FUNCTOR
473 
474 _IMP_foxs.IMP_CONTAINER_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
475 IMP_CONTAINER_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_CONTAINER_HAS_BOOST_FILESYSTEM
476 
477 _IMP_foxs.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
478 IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_CONTAINER_HAS_BOOST_PROGRAMOPTIONS
479 
480 _IMP_foxs.IMP_CONTAINER_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
481 IMP_CONTAINER_HAS_BOOST_RANDOM = _IMP_foxs.IMP_CONTAINER_HAS_BOOST_RANDOM
482 
483 _IMP_foxs.IMP_CONTAINER_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
484 IMP_CONTAINER_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_CONTAINER_HAS_BOOST_SYSTEM
485 
486 _IMP_foxs.IMP_CONTAINER_HAS_CGAL_swigconstant(_IMP_foxs)
487 IMP_CONTAINER_HAS_CGAL = _IMP_foxs.IMP_CONTAINER_HAS_CGAL
488 
489 _IMP_foxs.IMP_CONTAINER_HAS_HDF5_swigconstant(_IMP_foxs)
490 IMP_CONTAINER_HAS_HDF5 = _IMP_foxs.IMP_CONTAINER_HAS_HDF5
491 
492 _IMP_foxs.IMPCONTAINER_SHOW_WARNINGS_swigconstant(_IMP_foxs)
493 IMPCONTAINER_SHOW_WARNINGS = _IMP_foxs.IMPCONTAINER_SHOW_WARNINGS
494 import IMP.container
495 
496 _IMP_foxs.IMP_ATOM_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
497 IMP_ATOM_HAS_IMP_CGAL = _IMP_foxs.IMP_ATOM_HAS_IMP_CGAL
498 
499 _IMP_foxs.IMP_ATOM_HAS_IMP_KERNEL_swigconstant(_IMP_foxs)
500 IMP_ATOM_HAS_IMP_KERNEL = _IMP_foxs.IMP_ATOM_HAS_IMP_KERNEL
501 
502 _IMP_foxs.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_foxs)
503 IMP_ATOM_HAS_IMP_SCORE_FUNCTOR = _IMP_foxs.IMP_ATOM_HAS_IMP_SCORE_FUNCTOR
504 
505 _IMP_foxs.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
506 IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_ATOM_HAS_BOOST_PROGRAMOPTIONS
507 
508 _IMP_foxs.IMP_ATOM_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
509 IMP_ATOM_HAS_BOOST_RANDOM = _IMP_foxs.IMP_ATOM_HAS_BOOST_RANDOM
510 
511 _IMP_foxs.IMP_ATOM_HAS_BOOST_REGEX_swigconstant(_IMP_foxs)
512 IMP_ATOM_HAS_BOOST_REGEX = _IMP_foxs.IMP_ATOM_HAS_BOOST_REGEX
513 
514 _IMP_foxs.IMP_ATOM_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
515 IMP_ATOM_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_ATOM_HAS_BOOST_SYSTEM
516 
517 _IMP_foxs.IMP_ATOM_HAS_CGAL_swigconstant(_IMP_foxs)
518 IMP_ATOM_HAS_CGAL = _IMP_foxs.IMP_ATOM_HAS_CGAL
519 
520 _IMP_foxs.IMP_ATOM_HAS_HDF5_swigconstant(_IMP_foxs)
521 IMP_ATOM_HAS_HDF5 = _IMP_foxs.IMP_ATOM_HAS_HDF5
522 
523 _IMP_foxs.IMPATOM_SHOW_WARNINGS_swigconstant(_IMP_foxs)
524 IMPATOM_SHOW_WARNINGS = _IMP_foxs.IMPATOM_SHOW_WARNINGS
525 
526 _IMP_foxs.IMP_ATOM_TYPE_INDEX_swigconstant(_IMP_foxs)
527 IMP_ATOM_TYPE_INDEX = _IMP_foxs.IMP_ATOM_TYPE_INDEX
528 
529 _IMP_foxs.IMP_RESIDUE_TYPE_INDEX_swigconstant(_IMP_foxs)
530 IMP_RESIDUE_TYPE_INDEX = _IMP_foxs.IMP_RESIDUE_TYPE_INDEX
531 
532 _IMP_foxs.IMP_HIERARCHY_TYPE_INDEX_swigconstant(_IMP_foxs)
533 IMP_HIERARCHY_TYPE_INDEX = _IMP_foxs.IMP_HIERARCHY_TYPE_INDEX
534 import IMP.atom
535 
536 _IMP_foxs.IMP_SAXS_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
537 IMP_SAXS_HAS_IMP_CGAL = _IMP_foxs.IMP_SAXS_HAS_IMP_CGAL
538 
539 _IMP_foxs.IMP_SAXS_HAS_IMP_CONTAINER_swigconstant(_IMP_foxs)
540 IMP_SAXS_HAS_IMP_CONTAINER = _IMP_foxs.IMP_SAXS_HAS_IMP_CONTAINER
541 
542 _IMP_foxs.IMP_SAXS_HAS_IMP_DISPLAY_swigconstant(_IMP_foxs)
543 IMP_SAXS_HAS_IMP_DISPLAY = _IMP_foxs.IMP_SAXS_HAS_IMP_DISPLAY
544 
545 _IMP_foxs.IMP_SAXS_HAS_IMP_KERNEL_swigconstant(_IMP_foxs)
546 IMP_SAXS_HAS_IMP_KERNEL = _IMP_foxs.IMP_SAXS_HAS_IMP_KERNEL
547 
548 _IMP_foxs.IMP_SAXS_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_foxs)
549 IMP_SAXS_HAS_IMP_SCORE_FUNCTOR = _IMP_foxs.IMP_SAXS_HAS_IMP_SCORE_FUNCTOR
550 
551 _IMP_foxs.IMP_SAXS_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
552 IMP_SAXS_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_SAXS_HAS_BOOST_FILESYSTEM
553 
554 _IMP_foxs.IMP_SAXS_HAS_BOOST_PROGRAMOPTIONS_swigconstant(_IMP_foxs)
555 IMP_SAXS_HAS_BOOST_PROGRAMOPTIONS = _IMP_foxs.IMP_SAXS_HAS_BOOST_PROGRAMOPTIONS
556 
557 _IMP_foxs.IMP_SAXS_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
558 IMP_SAXS_HAS_BOOST_RANDOM = _IMP_foxs.IMP_SAXS_HAS_BOOST_RANDOM
559 
560 _IMP_foxs.IMP_SAXS_HAS_BOOST_REGEX_swigconstant(_IMP_foxs)
561 IMP_SAXS_HAS_BOOST_REGEX = _IMP_foxs.IMP_SAXS_HAS_BOOST_REGEX
562 
563 _IMP_foxs.IMP_SAXS_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
564 IMP_SAXS_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_SAXS_HAS_BOOST_SYSTEM
565 
566 _IMP_foxs.IMP_SAXS_HAS_CGAL_swigconstant(_IMP_foxs)
567 IMP_SAXS_HAS_CGAL = _IMP_foxs.IMP_SAXS_HAS_CGAL
568 
569 _IMP_foxs.IMP_SAXS_HAS_HDF5_swigconstant(_IMP_foxs)
570 IMP_SAXS_HAS_HDF5 = _IMP_foxs.IMP_SAXS_HAS_HDF5
571 
572 _IMP_foxs.IMPSAXS_SHOW_WARNINGS_swigconstant(_IMP_foxs)
573 IMPSAXS_SHOW_WARNINGS = _IMP_foxs.IMPSAXS_SHOW_WARNINGS
574 import IMP.saxs
575 
576 _IMP_foxs.IMP_FOXS_HAS_IMP_CGAL_swigconstant(_IMP_foxs)
577 IMP_FOXS_HAS_IMP_CGAL = _IMP_foxs.IMP_FOXS_HAS_IMP_CGAL
578 
579 _IMP_foxs.IMP_FOXS_HAS_IMP_CONTAINER_swigconstant(_IMP_foxs)
580 IMP_FOXS_HAS_IMP_CONTAINER = _IMP_foxs.IMP_FOXS_HAS_IMP_CONTAINER
581 
582 _IMP_foxs.IMP_FOXS_HAS_IMP_DISPLAY_swigconstant(_IMP_foxs)
583 IMP_FOXS_HAS_IMP_DISPLAY = _IMP_foxs.IMP_FOXS_HAS_IMP_DISPLAY
584 
585 _IMP_foxs.IMP_FOXS_HAS_IMP_SCORE_FUNCTOR_swigconstant(_IMP_foxs)
586 IMP_FOXS_HAS_IMP_SCORE_FUNCTOR = _IMP_foxs.IMP_FOXS_HAS_IMP_SCORE_FUNCTOR
587 
588 _IMP_foxs.IMP_FOXS_HAS_BOOST_FILESYSTEM_swigconstant(_IMP_foxs)
589 IMP_FOXS_HAS_BOOST_FILESYSTEM = _IMP_foxs.IMP_FOXS_HAS_BOOST_FILESYSTEM
590 
591 _IMP_foxs.IMP_FOXS_HAS_BOOST_RANDOM_swigconstant(_IMP_foxs)
592 IMP_FOXS_HAS_BOOST_RANDOM = _IMP_foxs.IMP_FOXS_HAS_BOOST_RANDOM
593 
594 _IMP_foxs.IMP_FOXS_HAS_BOOST_REGEX_swigconstant(_IMP_foxs)
595 IMP_FOXS_HAS_BOOST_REGEX = _IMP_foxs.IMP_FOXS_HAS_BOOST_REGEX
596 
597 _IMP_foxs.IMP_FOXS_HAS_BOOST_SYSTEM_swigconstant(_IMP_foxs)
598 IMP_FOXS_HAS_BOOST_SYSTEM = _IMP_foxs.IMP_FOXS_HAS_BOOST_SYSTEM
599 
600 _IMP_foxs.IMP_FOXS_HAS_CGAL_swigconstant(_IMP_foxs)
601 IMP_FOXS_HAS_CGAL = _IMP_foxs.IMP_FOXS_HAS_CGAL
602 
603 _IMP_foxs.IMP_FOXS_HAS_HDF5_swigconstant(_IMP_foxs)
604 IMP_FOXS_HAS_HDF5 = _IMP_foxs.IMP_FOXS_HAS_HDF5
605 
606 _IMP_foxs.IMPFOXS_SHOW_WARNINGS_swigconstant(_IMP_foxs)
607 IMPFOXS_SHOW_WARNINGS = _IMP_foxs.IMPFOXS_SHOW_WARNINGS
608 
609 def get_module_version():
610  """get_module_version() -> std::string const"""
611  return _IMP_foxs.get_module_version()
612 
613 def get_example_path(fname):
614  """get_example_path(std::string fname) -> std::string"""
615  return _IMP_foxs.get_example_path(fname)
616 
617 def get_data_path(fname):
618  """get_data_path(std::string fname) -> std::string"""
619  return _IMP_foxs.get_data_path(fname)
620 from . import _version_check
621 _version_check.check_version(get_module_version())
622 __version__ = get_module_version()
623 
624 
625 
Various classes to hold sets of particles.
Make CGAL functionality available to IMP.
Composable functors to implement scores via compile-time composition.
Basic functionality that is expected to be used by a wide variety of IMP users.
General purpose algebraic and geometric methods that are expected to be used by a wide variety of IMP...
std::string get_example_path(std::string file_name)
Return the full path to one of this module's example files.
Output IMP model data in various file formats.
Functionality for loading, creating, manipulating and scoring atomic structures.
Support for developing and analyzing benchmarks of IMP code.
std::string get_data_path(std::string file_name)
Return the full path to one of this module's data files.
Support for small angle X-ray scattering (SAXS) data.