IMP::score_functor::Score Struct Reference

A functor for computing a distance based score for two particles. More...

#include <IMP/score_functor/Score.h>

Inheritance diagram for IMP::score_functor::Score:

Detailed Description

A functor for computing a distance based score for two particles.

Definition at line 20 of file Score.h.

Public Member Functions
kernel::ModelObjectsTemp	get_inputs (kernel::Model *m, const kernel::ParticleIndexes &pis) const
template<unsigned int D>
bool	get_is_trivially_zero (kernel::Model *m, const base::Array< D, kernel::ParticleIndex > &p, double squared_distance) const
template<unsigned int D>
double	get_maximum_range (kernel::Model *m, const base::Array< D, kernel::ParticleIndex > &p) const
template<unsigned int D>
double	get_score (kernel::Model *m, const base::Array< D, kernel::ParticleIndex > &p, double distance) const
	Return the score at the passed feature size (eg distance). More...
template<unsigned int D>
DerivativePair	get_score_and_derivative (kernel::Model *m, const base::Array< D, kernel::ParticleIndex > &p, double distance) const
	Return the score and derivative at the passed feature size (eg distance). More...
void	show (std::ostream &) const

Member Function Documentation

kernel::ModelObjectsTemp IMP::score_functor::Score::get_inputs	(	kernel::Model *	m,
		const kernel::ParticleIndexes &	pis
	)		const

Return the set of particles read when particle p is part of the passed tuples. The default implementation provided here just returns the list containing p.

Definition at line 72 of file Score.h.

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template<unsigned int D>

bool IMP::score_functor::Score::get_is_trivially_zero	(	kernel::Model *	m,
		const base::Array< D, kernel::ParticleIndex > &	p,
		double	squared_distance
	)		const

Return true if the function can be easily determined to be zero at the passed squared distance. The default implementation provided here returns false.

Note

That it is squared distance, not distance.

Definition at line 52 of file Score.h.

template<unsigned int D>

double IMP::score_functor::Score::get_maximum_range	(	kernel::Model *	m,
		const base::Array< D, kernel::ParticleIndex > &	p
	)		const

Return an upper bound on the distance at which the score can be non-zero. The default implementation provided here returns infinity.

Definition at line 63 of file Score.h.

template<unsigned int D>

double IMP::score_functor::Score::get_score	(	kernel::Model *	m,
		const base::Array< D, kernel::ParticleIndex > &	p,
		double	distance
	)		const

Return the score at the passed feature size (eg distance).

The involved particle indexes are passed along.

Precondition

get_is_trivially_zero() or get_maximum_range() has been called and get_is_trivially_zero() is false.

template<unsigned int D>

DerivativePair IMP::score_functor::Score::get_score_and_derivative	(	kernel::Model *	m,
		const base::Array< D, kernel::ParticleIndex > &	p,
		double	distance
	)		const

Return the score and derivative at the passed feature size (eg distance).

The derivative is for the feature decreasing.

Precondition

get_is_trivially_zero() or get_maximum_range() has been called and get_is_trivially_zero() is false.

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The documentation for this struct was generated from the following file:

• Score.h