IMP  2.3.1
The Integrative Modeling Platform
IMP::isd::AtomicCrossLinkMSRestraint Member List

This is the complete list of members for IMP::isd::AtomicCrossLinkMSRestraint, including all inherited members.

add_contribution(const ParticleIndexPair &ppi, const ParticleIndexPair &sigmas, const ParticleIndex &psi)IMP::isd::AtomicCrossLinkMSRestraint
add_score_and_derivatives(ScoreAccumulator sa) const IMP::kernel::Restraint
AtomicCrossLinkMSRestraint(IMP::Model *m, double length, Float slope=0.0, bool i_am_part_of_log_score=false, std::string name="AtomicCrossLinkMSRestraint%1%")IMP::isd::AtomicCrossLinkMSRestraint
clear_caches()IMP::base::Objectvirtual
create_current_decomposition() const IMP::kernel::Restraint
create_decomposition() const IMP::kernel::Restraint
create_scoring_function(double weight=1.0, double max=NO_MAX) const IMP::kernel::Restraintvirtual
do_add_score_and_derivatives(ScoreAccumulator sa) const IMP::kernel::Restraintprotectedvirtual
do_create_current_decomposition() const IMP::kernel::Restraintprotectedvirtual
do_create_decomposition() const IMP::kernel::Restraintprotectedvirtual
do_destroy()IMP::base::Objectprotectedvirtual
do_get_inputs() const IMP::isd::AtomicCrossLinkMSRestraintvirtual
do_get_interactions() const IMP::kernel::ModelObjectprotectedvirtual
do_get_outputs() const IMP::kernel::Restraintprotectedvirtual
evaluate_for_contributions(Ints c, DerivativeAccumulator *accum) const IMP::isd::AtomicCrossLinkMSRestraint
get_check_level() const (defined in IMP::base::Object)IMP::base::Object
get_contribution(int i) const IMP::isd::AtomicCrossLinkMSRestraint
get_contribution_psi(int i) const IMP::isd::AtomicCrossLinkMSRestraint
get_contribution_scores(int index) const IMP::isd::AtomicCrossLinkMSRestraint
get_contribution_sigmas(int i) const IMP::isd::AtomicCrossLinkMSRestraint
get_has_dependencies() const IMP::kernel::ModelObject
get_has_required_score_states() const IMP::kernel::ModelObject
get_inputs() const IMP::kernel::ModelObject
get_interactions() const IMP::kernel::ModelObject
get_last_score() const IMP::kernel::Restraintvirtual
get_log_level() const (defined in IMP::base::Object)IMP::base::Object
get_maximum_score() const (defined in IMP::kernel::Restraint)IMP::kernel::Restraint
get_model() const (defined in IMP::kernel::ModelObject)IMP::kernel::ModelObject
get_name() const (defined in IMP::base::Object)IMP::base::Object
get_number_of_contributions() const IMP::isd::AtomicCrossLinkMSRestraint
get_outputs() const IMP::kernel::ModelObject
get_required_score_states() const IMP::kernel::ModelObject
get_score() const IMP::kernel::Restraint
get_type_name() const (defined in IMP::isd::AtomicCrossLinkMSRestraint)IMP::isd::AtomicCrossLinkMSRestraintvirtual
get_version_info() const IMP::isd::AtomicCrossLinkMSRestraintvirtual
get_was_good() const IMP::kernel::Restraint
get_weight() const (defined in IMP::kernel::Restraint)IMP::kernel::Restraint
handle_set_has_required_score_states(bool)IMP::kernel::ModelObjectprotectedvirtual
ModelObject(kernel::Model *m, std::string name) (defined in IMP::kernel::ModelObject)IMP::kernel::ModelObject
NonCopyable() (defined in IMP::base::NonCopyable)IMP::base::NonCopyableprotected
Object(std::string name)IMP::base::Objectprotected
Restraint(kernel::Model *m, std::string name)IMP::kernel::Restraint
set_check_level(CheckLevel l)IMP::base::Object
set_has_dependencies(bool tf)IMP::kernel::ModelObject
set_has_required_score_states(bool tf)IMP::kernel::ModelObject
set_log_level(LogLevel l)IMP::base::Object
set_maximum_score(double s) (defined in IMP::kernel::Restraint)IMP::kernel::Restraint
set_name(std::string name) (defined in IMP::base::Object)IMP::base::Object
set_part_of_log_score(bool hey) (defined in IMP::isd::AtomicCrossLinkMSRestraint)IMP::isd::AtomicCrossLinkMSRestraint
set_slope(Float slope) (defined in IMP::isd::AtomicCrossLinkMSRestraint)IMP::isd::AtomicCrossLinkMSRestraint
set_was_used(bool tf) const IMP::base::Object
set_weight(Float weight) (defined in IMP::kernel::Restraint)IMP::kernel::Restraint
show(std::ostream &out) const (defined in IMP::isd::AtomicCrossLinkMSRestraint)IMP::isd::AtomicCrossLinkMSRestraint
unprotected_evaluate(IMP::DerivativeAccumulator *accum) const (defined in IMP::isd::AtomicCrossLinkMSRestraint)IMP::isd::AtomicCrossLinkMSRestraintvirtual
~AtomicCrossLinkMSRestraint() (defined in IMP::isd::AtomicCrossLinkMSRestraint)IMP::isd::AtomicCrossLinkMSRestraintprotectedvirtual
~ModelObject() (defined in IMP::kernel::ModelObject)IMP::kernel::ModelObject
~Object() (defined in IMP::base::Object)IMP::base::Objectvirtual