IMP::statistics::PartitionalClustering Class Reference

A base class for clustering results where each item is in one cluster. More...

#include <IMP/statistics/PartitionalClustering.h>

Inheritance diagram for IMP::statistics::PartitionalClustering:

Detailed Description

A base class for clustering results where each item is in one cluster.

Data items are represented by an index. In a partitional clustering each item can only be contained on one cluster. The indexes used refer to the index used in the Metric or Embedding used to generate the clustering.

Definition at line 25 of file PartitionalClustering.h.

Public Member Functions
	PartitionalClustering (std::string name)
virtual const Ints &	get_cluster (unsigned int cluster_index) const =0
	Return the list of indexes in the ith cluster. More...
virtual int	get_cluster_representative (unsigned int cluster_index) const =0
	Return the index of an item that "typifies" the ith cluster. More...
virtual unsigned int	get_number_of_clusters () const =0
Public Member Functions inherited from IMP::base::Object
virtual void	clear_caches ()
CheckLevel	get_check_level () const
LogLevel	get_log_level () const
virtual VersionInfo	get_version_info () const
	Get information about the module and version of the object. More...
void	set_check_level (CheckLevel l)
void	set_log_level (LogLevel l)
	Set the logging level used in this object. More...
void	set_was_used (bool tf) const
void	show (std::ostream &out=std::cout) const
const std::string &	get_name () const
void	set_name (std::string name)
virtual std::string	get_type_name () const

Additional Inherited Members
Protected Member Functions inherited from IMP::base::Object
	Object (std::string name)
	Construct an object with the given name. More...
virtual void	do_destroy ()

Member Function Documentation

virtual const Ints& IMP::statistics::PartitionalClustering::get_cluster ( unsigned int  cluster_index ) const

pure virtual

Return the list of indexes in the ith cluster.

Implemented in IMP::statistics::PartitionalClusteringWithCenter.

virtual int IMP::statistics::PartitionalClustering::get_cluster_representative ( unsigned int  cluster_index ) const

pure virtual

Return the index of an item that "typifies" the ith cluster.

Implemented in IMP::statistics::PartitionalClusteringWithCenter.

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The documentation for this class was generated from the following file:

• PartitionalClustering.h