This class performs alignment and RMSD calculation for two sets of coordinates. More...

Inherits object.

Detailed Description

This class performs alignment and RMSD calculation for two sets of coordinates.

Inputs:

query = {'p1':coords(L,3), 'p2':coords(L,3)}
template = {'p1':coords(L,3), 'p2':coords(L,3)}

The class also takes into accout non-equal stoichiometry of the proteins. If this is the case, the protein names of protein in multiple copies should be delivered in the following form: nameA..1, nameA..2 (note two dots).

Note: This class is only available in Python.

Definition at line 23 of file pmi/Analysis.py.

The documentation for this class was generated from the following file:

pmi/Analysis.py