Detailed Description

A decorator for helping deal with a hierarchy.

See HierarchyTraits for an example of how to define a custom hierarchy and Hierarchy for a hierarchy for molecules.

Definition at line 78 of file core/Hierarchy.h.

Public Member Functions
	Hierarchy (const IMP::kernel::ParticleAdaptor &d, const HierarchyTraits &tr=get_default_traits())

	Hierarchy (::IMP::kernel::Model *m,::IMP::kernel::ParticleIndex id, const HierarchyTraits &tr=get_default_traits())

void	add_child (Hierarchy h) const

void	add_child_at (Hierarchy h, unsigned int pos)

void	clear_children ()

Hierarchy	get_child (unsigned int i) const

kernel::ParticleIndex	get_child_index (unsigned int i) const

int	get_child_index () const
	Return i such that `get_parent().get_child(i) == this` More...

GenericHierarchies	get_children () const

kernel::ParticleIndexes	get_children_indexes () const

const DecoratorTraits &	get_decorator_traits () const

unsigned int	get_number_of_children () const

Hierarchy	get_parent () const

HierarchyTraits	get_traits ()

void	remove_child (unsigned int i)

void	remove_child (Hierarchy h)

void	show (std::ostream &out=std::cout) const

Public Member Functions inherited from IMP::kernel::Decorator
bool	get_is_valid () const

Model *	get_model () const
	Returns the Model containing the particle. More...

Particle *	get_particle () const
	Returns the particle decorated by this decorator. More...

ParticleIndex	get_particle_index () const
	Returns the particle index decorated by this decorator. More...

	operator Particle * () const

	operator ParticleIndex () const

Particle *	operator-> () const

Static Public Member Functions
static const DecoratorTraits &	get_default_decorator_traits ()

static const HierarchyTraits &	get_default_traits ()
	Get the default hierarchy traits. More...

static bool	get_is_setup (const IMP::kernel::ParticleAdaptor &p, const HierarchyTraits &tr=get_default_traits())

static bool	get_is_setup (kernel::Model *, kernel::ParticleIndex, HierarchyTraits=Hierarchy::get_default_traits())

static Hierarchy	setup_particle (IMP::kernel::ParticleAdaptor d, DecoratorTraits tr=get_default_decorator_traits())

static Hierarchy	setup_particle (kernel::Model *m, ParticleIndex pi, DecoratorTraits tr=get_default_decorator_traits())

static Hierarchy	setup_particle (kernel::Model *m, ParticleIndex pi, kernel::ParticleIndexes children, DecoratorTraits tr=get_default_decorator_traits())

static Hierarchy	setup_particle (IMP::kernel::ParticleAdaptor d, kernel::ParticleIndexes children, DecoratorTraits tr=get_default_decorator_traits())

static Hierarchy	setup_particle (IMP::kernel::ParticleAdaptor d, kernel::ParticlesTemp children, DecoratorTraits tr=get_default_decorator_traits())

static Hierarchy	setup_particle (kernel::Model *m, ParticleIndex pi, kernel::ParticlesTemp children, DecoratorTraits tr=get_default_decorator_traits())

Additional Inherited Members
Protected Member Functions inherited from IMP::kernel::Decorator
	Decorator (Model *m, ParticleIndex pi)

	Decorator (ParticleAdaptor p)

Member Function Documentation

int IMP::core::Hierarchy::get_child_index ( ) const

Return i such that get_parent().get_child(i) == this

static const HierarchyTraits& IMP::core::Hierarchy::get_default_traits ( )

static

Get the default hierarchy traits.

static bool IMP::core::Hierarchy::get_is_setup	(	kernel::Model *	,
		kernel::ParticleIndex	,
		HierarchyTraits	= `Hierarchy::get_default_traits()`
	)

static

Check if the particle has the needed attributes for a cast to succeed

Definition at line 105 of file core/Hierarchy.h.

Hierarchy IMP::core::Hierarchy::get_parent ( ) const

Definition at line 112 of file core/Hierarchy.h.

Here is the call graph for this function:

static Hierarchy IMP::core::Hierarchy::setup_particle	(	kernel::Model *	m,
		ParticleIndex	pi,
		DecoratorTraits	tr = `get_default_decorator_traits()`
	)

static

Setup the particle so it can be used with this decorator.

Definition at line 98 of file core/Hierarchy.h.

static Hierarchy IMP::core::Hierarchy::setup_particle	(	kernel::Model *	m,
		ParticleIndex	pi,
		kernel::ParticleIndexes	children,
		DecoratorTraits	tr = `get_default_decorator_traits()`
	)

static

Setup the particle and add children.

Definition at line 100 of file core/Hierarchy.h.

The documentation for this class was generated from the following file: