IMP::statistics::ConfigurationSetXYZEmbedding Class Reference

Embed a configuration using the XYZ coordinates of a set of particles. More...

#include <IMP/statistics/embeddings.h>

Inheritance diagram for IMP::statistics::ConfigurationSetXYZEmbedding:

Public Member Functions
	ConfigurationSetXYZEmbedding (ConfigurationSet *cs, SingletonContainerAdaptor pi, bool align=false)
unsigned int	get_number_of_items () const
algebra::VectorKD	get_point (unsigned int i) const
virtual std::string	get_type_name () const
virtual ::IMP::base::VersionInfo	get_version_info () const
	Get information about the module and version of the object.
Public Member Functions inherited from IMP::statistics::Embedding
virtual algebra::VectorKDs	get_points () const
double	get_weight (unsigned int i) const
Public Member Functions inherited from IMP::base::Object
virtual void	clear_caches ()
virtual void	do_destroy ()
CheckLevel	get_check_level () const
LogLevel	get_log_level () const
void	set_check_level (CheckLevel l)
void	set_log_level (LogLevel l)
	Set the logging level used in this object. More...
void	set_was_used (bool tf) const
void	show (std::ostream &out=std::cout) const
const std::string &	get_name () const
void	set_name (std::string name)

Additional Inherited Members
Protected Member Functions inherited from IMP::statistics::Embedding
	Embedding (std::string name)
virtual double	do_get_weight (unsigned int i) const
	By default return 1.0.
Protected Member Functions inherited from IMP::base::Object
	Object (std::string name)
	Construct an object with the given name. More...

Detailed Description

The point for each configuration of the model is a concatenation of the Cartesian coordinates of the particles contained in the passed SingletonContainer.

See ConfigurationSet for more information about the input.

Definition at line 28 of file embeddings.h.

Constructor & Destructor Documentation

IMP::statistics::ConfigurationSetXYZEmbedding::ConfigurationSetXYZEmbedding	(	ConfigurationSet *	cs,
		SingletonContainerAdaptor	pi,
		bool	align = false
	)

If align is true, all the configurations are rigidly aligned with the first before generating their coordinates.

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The documentation for this class was generated from the following file:

• embeddings.h