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IMP
2.2.1
The Integrative Modeling Platform
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IMP
2.2.1
The Integrative Modeling Platform
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Abstract class to implement hierarchical methods. More...
#include <IMP/kernel/Refiner.h>
Inheritance diagram for IMP::kernel::Refiner:Public Member Functions | |
| Refiner (std::string name="Refiner %1%") | |
| virtual bool | get_can_refine (Particle *) const |
| Return true if this refiner can refine that particle. More... | |
| virtual unsigned int | get_number_of_refined (Particle *a) const |
| virtual const ParticlesTemp | get_refined (Particle *a) const =0 |
| Refine the passed particle into a set of particles. More... | |
| virtual Particle * | get_refined (Particle *a, unsigned int i) const |
| Get the ith refined particle. More... | |
| virtual ParticleIndexes | get_refined_indexes (Model *m, ParticleIndex pi) const |
| Public Member Functions inherited from IMP::kernel::ParticleInputs | |
| virtual ContainersTemp | get_input_containers (Particle *p) const |
| virtual ParticlesTemp | get_input_particles (Particle *p) const |
| ModelObjectsTemp | get_inputs (kernel::Model *m, const ParticleIndexes &pis) const |
| Public Member Functions inherited from IMP::base::Object | |
| virtual void | clear_caches () |
| virtual void | do_destroy () |
| CheckLevel | get_check_level () const |
| LogLevel | get_log_level () const |
| virtual VersionInfo | get_version_info () const |
| Get information about the module and version of the object. | |
| void | set_check_level (CheckLevel l) |
| void | set_log_level (LogLevel l) |
| Set the logging level used in this object. More... | |
| void | set_was_used (bool tf) const |
| void | show (std::ostream &out=std::cout) const |
| const std::string & | get_name () const |
| void | set_name (std::string name) |
| virtual std::string | get_type_name () const |
Iterating through the set of refined particles | |
Using iterators can be more efficient than using the bulk get_refined(), however it is not necessarily so. | |
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typedef internal::IndexingIterator < Accessor > | RefinedIterator |
| RefinedIterator | refined_begin (Particle *a) const |
| RefinedIterator | refined_end (Particle *a) const |
Additional Inherited Members | |
| Protected Member Functions inherited from IMP::kernel::ParticleInputs | |
| virtual ModelObjectsTemp | do_get_inputs (kernel::Model *m, const ParticleIndexes &pis) const |
| Protected Member Functions inherited from IMP::base::Object | |
| Object (std::string name) | |
| Construct an object with the given name. More... | |
The job of this class is to take a single particle and, if appropriate, return a list of particles. These lists can reflect existing relationships, such as the IMP::core::LeavesRefiner or arbitrary relationships set up for a particular purpose, such as IMP::core::TableRefiner.
Definition at line 30 of file kernel/Refiner.h.
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virtual |
This should not throw, so be careful what fields are touched.
Reimplemented in IMP::core::TableRefiner, IMP::core::ChildrenRefiner, IMP::core::LeavesRefiner, IMP::core::FixedRefiner, and IMP::atom::BondEndpointsRefiner.
Definition at line 38 of file kernel/Refiner.h.
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virtual |
As a precondition can_refine_particle(a) should be true.
Definition at line 56 of file kernel/Refiner.h.
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pure virtual |
As a precondition can_refine_particle(a) should be true.
Implemented in IMP::core::TableRefiner, IMP::core::ChildrenRefiner, IMP::core::LeavesRefiner, IMP::core::FixedRefiner, and IMP::atom::BondEndpointsRefiner.
As a precondition can_refine_particle(a) should be true.
Definition at line 50 of file kernel/Refiner.h.