IMP  2.2.1
The Integrative Modeling Platform
IMP::isd::Scale Class Reference

Add scale parameter to particle. More...

#include <IMP/isd/Scale.h>

+ Inheritance diagram for IMP::isd::Scale:

Public Member Functions

 Scale (::IMP::kernel::Model *m,::IMP::kernel::ParticleIndex id)
 
 Scale (const IMP::kernel::ParticleAdaptor &d)
 
void add_to_scale_derivative (Float d, DerivativeAccumulator &accum)
 
Float get_scale () const
 
Float get_scale_derivative () const
 
bool get_scale_is_optimized () const
 
void set_scale (Float d)
 
void set_scale_is_optimized (bool val)
 
void show (std::ostream &out=std::cout) const
 
- Public Member Functions inherited from IMP::isd::Nuisance
 Nuisance (::IMP::kernel::Model *m,::IMP::kernel::ParticleIndex id)
 
 Nuisance (const IMP::kernel::ParticleAdaptor &d)
 
void add_to_nuisance_derivative (Float d, DerivativeAccumulator &accum)
 
bool get_has_lower () const
 
bool get_has_upper () const
 
Float get_lower () const
 
Float get_nuisance () const
 
Float get_nuisance_derivative () const
 
bool get_nuisance_is_optimized () const
 
Float get_upper () const
 
void remove_lower ()
 
void remove_upper ()
 
void set_lower (Float d)
 
void set_lower (kernel::Particle *d)
 
void set_nuisance (Float d)
 
void set_nuisance_is_optimized (bool val)
 
void set_upper (Float d)
 
void set_upper (kernel::Particle *d)
 
void show (std::ostream &out=std::cout) const
 
- Public Member Functions inherited from IMP::kernel::Decorator
Modelget_model () const
 Returns the Model containing the particle.
 
Particleget_particle () const
 
ParticleIndex get_particle_index () const
 
 operator Particle * () const
 
 operator ParticleIndex () const
 
Particleoperator-> () const
 

Static Public Member Functions

static Scale decorate_particle (::IMP::kernel::Particle *p)
 
static bool get_is_setup (const IMP::kernel::ParticleAdaptor &p)
 
static bool get_is_setup (kernel::Model *m, kernel::ParticleIndex pi)
 
static FloatKey get_scale_key ()
 
static Scale setup_particle (IMP::kernel::ParticleAdaptor decorator)
 
static Scale setup_particle (kernel::Model *m, ParticleIndex pi)
 
static Scale setup_particle (IMP::kernel::ParticleAdaptor decorator, double scale)
 
static Scale setup_particle (kernel::Model *m, ParticleIndex pi, double scale)
 
- Static Public Member Functions inherited from IMP::isd::Nuisance
static Nuisance decorate_particle (::IMP::kernel::Particle *p)
 
static bool get_is_setup (const IMP::kernel::ParticleAdaptor &p)
 
static bool get_is_setup (kernel::Model *m, kernel::ParticleIndex pi)
 
static FloatKey get_lower_key ()
 
static kernel::ParticleIndexKey get_lower_particle_key ()
 
static FloatKey get_nuisance_key ()
 
static FloatKey get_upper_key ()
 
static kernel::ParticleIndexKey get_upper_particle_key ()
 
static Nuisance setup_particle (IMP::kernel::ParticleAdaptor decorator)
 
static Nuisance setup_particle (kernel::Model *m, ParticleIndex pi)
 
static Nuisance setup_particle (IMP::kernel::ParticleAdaptor decorator, double nuisance)
 
static Nuisance setup_particle (kernel::Model *m, ParticleIndex pi, double nuisance)
 

Additional Inherited Members

- Protected Member Functions inherited from IMP::kernel::Decorator
 Decorator (Model *m, ParticleIndex pi)
 
 Decorator (ParticleAdaptor p)
 

Detailed Description

This is just syntactic sugar for a Nuisance bounded to be positive.

Definition at line 24 of file Scale.h.

Member Function Documentation

static Scale IMP::isd::Scale::decorate_particle ( ::IMP::kernel::Particle p)
static
Deprecated:
As of IMP release 2.1. See the IMP Deprecation Policy for more information about deprecation in IMP. Check explicitly instead.

Definition at line 29 of file Scale.h.

static Scale IMP::isd::Scale::setup_particle ( kernel::Model m,
ParticleIndex  pi 
)
static

Setup the particle so it can be used with this decorator.

Definition at line 30 of file Scale.h.

static Scale IMP::isd::Scale::setup_particle ( IMP::kernel::ParticleAdaptor  decorator,
double  scale 
)
static
See Also
setup_particle(m, pi, scale )

Definition at line 31 of file Scale.h.

static Scale IMP::isd::Scale::setup_particle ( kernel::Model m,
ParticleIndex  pi,
double  scale 
)
static

Setup the particle so that it can be used with this decorator

Definition at line 31 of file Scale.h.


The documentation for this class was generated from the following file: