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IMP
2.2.1
The Integrative Modeling Platform
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IMP
2.2.1
The Integrative Modeling Platform
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Find all nearby pairs by sweeping the bounding boxes. More...
#include <IMP/core/BoxSweepClosePairsFinder.h>
Inheritance diagram for IMP::core::BoxSweepClosePairsFinder:Public Member Functions | |
| virtual kernel::ModelObjectsTemp | do_get_inputs (kernel::Model *m, const kernel::ParticleIndexes &pis) const |
| virtual IntPairs | get_close_pairs (const algebra::BoundingBox3Ds &bbs) const |
| virtual IntPairs | get_close_pairs (const algebra::BoundingBox3Ds &bas, const algebra::BoundingBox3Ds &bbs) const |
| virtual kernel::ParticleIndexPairs | get_close_pairs (kernel::Model *m, const kernel::ParticleIndexes &pc) const |
| virtual kernel::ParticleIndexPairs | get_close_pairs (kernel::Model *m, const kernel::ParticleIndexes &pca, const kernel::ParticleIndexes &pcb) const |
| virtual std::string | get_type_name () const |
| virtual ::IMP::base::VersionInfo | get_version_info () const |
| Get information about the module and version of the object. | |
| Public Member Functions inherited from IMP::core::ClosePairsFinder | |
| ClosePairsFinder (std::string name) | |
| kernel::ParticlePairsTemp | get_close_pairs (const kernel::ParticlesTemp &pc) const |
| kernel::ParticlePairsTemp | get_close_pairs (const kernel::ParticlesTemp &pca, const kernel::ParticlesTemp &pcb) const |
| virtual void | set_distance (double d) |
| double | get_distance () const |
| IMP_LIST (public, PairFilter, pair_filter, PairPredicate *, PairPredicates) | |
| Public Member Functions inherited from IMP::kernel::ParticleInputs | |
| virtual ContainersTemp | get_input_containers (Particle *p) const |
| virtual ParticlesTemp | get_input_particles (Particle *p) const |
| ModelObjectsTemp | get_inputs (kernel::Model *m, const ParticleIndexes &pis) const |
| Public Member Functions inherited from IMP::base::Object | |
| virtual void | clear_caches () |
| virtual void | do_destroy () |
| CheckLevel | get_check_level () const |
| LogLevel | get_log_level () const |
| void | set_check_level (CheckLevel l) |
| void | set_log_level (LogLevel l) |
| Set the logging level used in this object. More... | |
| void | set_was_used (bool tf) const |
| void | show (std::ostream &out=std::cout) const |
| const std::string & | get_name () const |
| void | set_name (std::string name) |
Additional Inherited Members | |
| Protected Member Functions inherited from IMP::base::Object | |
| Object (std::string name) | |
| Construct an object with the given name. More... | |
This method is much faster than the quadratic one when there are are large sets of points.
The class BoxSweepClosePairsFinder requires CGAL in order to function.
Definition at line 24 of file BoxSweepClosePairsFinder.h.
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virtual |
Overload this method to specify the inputs.
Reimplemented from IMP::kernel::ParticleInputs.