IMP  2.2.0
The Integrative Modeling Platform
IMP.em2d.MonteCarloRelativeMoves.MonteCarloRelativeMoves Class Reference

Class to do Monte Carlo sampling by using as the set of movements relative positions between rigid bodies. More...

Public Member Functions

def run_monte_carlo
 Run MonteCarlo sampling to generate possible states for DOMINO.
 
def run_monte_carlo_with_relative_movers
 Run MonteCarlo sampling to generate possible states for DOMINO.
 
def set_relative_movers
 Generate the relative models form the transforms. More...
 
def set_temperature_pattern
 Set the temperature pattern to use during the Monte Carlo optimizations. More...
 

Detailed Description

Note
This class is only available in Python.

Definition at line 38 of file MonteCarloRelativeMoves.py.

Member Function Documentation

def IMP.em2d.MonteCarloRelativeMoves.MonteCarloRelativeMoves.set_relative_movers (   self,
  max_translation,
  max_rotation 
)

The transforms is a list with triplets [id1, id2, transform_file]

Parameters
max_translationMaximum translation distance allowed for the moves
max_rotationMaximum rotation angle allowed for the moves

Definition at line 90 of file MonteCarloRelativeMoves.py.

def IMP.em2d.MonteCarloRelativeMoves.MonteCarloRelativeMoves.set_temperature_pattern (   self,
  temperatures,
  iterations,
  cycles 
)
Parameters
temperaturesList of temperature values
iterationsList with the iterations to do for each of the temperatures.
cyclesNumber of repetitions of the pattern of temperatures and iterations

Definition at line 65 of file MonteCarloRelativeMoves.py.


The documentation for this class was generated from the following file: