Detect cn symmetry in proteins and density maps. More...

Public Member Functions
	CnSymmAxisDetector (int symm_deg, em::DensityMap *dmap, float density_threshold, float top_p=0.8)

	CnSymmAxisDetector (int symm_deg, const atom::Hierarchies &mhs)

float	calc_symm_score (int symm_axis_ind) const

int	get_non_symmetry_axis_length () const

algebra::PrincipalComponentAnalysis	get_pca () const

algebra::Vector3D	get_symmetry_axis () const

int	get_symmetry_axis_index () const

void	show (std::ostream &out=std::cout) const

Protected Member Functions
Float	symm_avg (const algebra::Vector3D &start_p, const algebra::Vector3D &symm_vec) const

Protected Attributes
base::PointerMember < em::DensityMap >	dmap_

algebra::Transformation3D	from_native_

algebra::PrincipalComponentAnalysis	pca_

int	symm_deg_

algebra::Transformation3D	to_native_

Floats	values_

algebra::Vector3Ds	vecs_

Detailed Description

Definition at line 23 of file CnSymmAxisDetector.h.

The documentation for this class was generated from the following file:

Public Member Functions