IMP  2.1.1
The Integrative Modeling Platform
Public Member Functions | Static Public Member Functions | List of all members
IMP::isd::Scale Class Reference

Add scale parameter to particle. More...

#include <IMP/isd/Scale.h>

+ Inheritance diagram for IMP::isd::Scale:

Public Member Functions

 Scale (::IMP::kernel::Model *m,::IMP::kernel::ParticleIndex id)
 
 Scale (const IMP::kernel::ParticleAdaptor &d)
 
void add_to_scale_derivative (Float d, DerivativeAccumulator &accum)
 
Float get_scale () const
 
Float get_scale_derivative () const
 
bool get_scale_is_optimized () const
 
void set_scale (Float d)
 
void set_scale_is_optimized (bool val)
 
void show (std::ostream &out=std::cout) const
 
- Public Member Functions inherited from IMP::isd::Nuisance
 Nuisance (::IMP::kernel::Model *m,::IMP::kernel::ParticleIndex id)
 
 Nuisance (const IMP::kernel::ParticleAdaptor &d)
 
void add_to_nuisance_derivative (Float d, DerivativeAccumulator &accum)
 
bool get_has_lower () const
 
bool get_has_upper () const
 
Float get_lower () const
 
Float get_nuisance () const
 
Float get_nuisance_derivative () const
 
bool get_nuisance_is_optimized () const
 
Float get_upper () const
 
void remove_lower ()
 
void remove_upper ()
 
void set_lower (Float d)
 
void set_lower (kernel::Particle *d)
 
void set_nuisance (Float d)
 
void set_nuisance_is_optimized (bool val)
 
void set_upper (Float d)
 
void set_upper (kernel::Particle *d)
 
void show (std::ostream &out=std::cout) const
 
- Public Member Functions inherited from IMP::kernel::Decorator
ParticleIndex get_particle_index () const
 
Particle * get_particle () const
 
Model * get_model () const
 Returns the Model containing the particle.
 
 Decorator (Particle *p)
 
 Decorator ()
 

Static Public Member Functions

static Scale decorate_particle (::IMP::kernel::Particle *p)
 
static bool get_is_setup (const IMP::kernel::ParticleAdaptor &p)
 
static bool get_is_setup (kernel::Model *m, kernel::ParticleIndex pi)
 
static FloatKey get_scale_key ()
 
static bool particle_is_instance (::IMP::kernel::Particle *p)
 
static bool particle_is_instance (IMP::kernel::Model *m, IMP::kernel::ParticleIndex pi)
 
static Scale setup_particle (kernel::Model *m, ParticleIndex pi)
 
static Scale setup_particle (IMP::kernel::ParticleAdaptor decorator)
 
static Scale setup_particle (IMP::kernel::ParticleAdaptor decorator, double scale)
 
static Scale setup_particle (kernel::Model *m, ParticleIndex pi, double scale)
 
- Static Public Member Functions inherited from IMP::isd::Nuisance
static Nuisance decorate_particle (::IMP::kernel::Particle *p)
 
static bool get_is_setup (const IMP::kernel::ParticleAdaptor &p)
 
static bool get_is_setup (kernel::Model *m, kernel::ParticleIndex pi)
 
static FloatKey get_lower_key ()
 
static kernel::ParticleIndexKey get_lower_particle_key ()
 
static FloatKey get_nuisance_key ()
 
static FloatKey get_upper_key ()
 
static kernel::ParticleIndexKey get_upper_particle_key ()
 
static bool particle_is_instance (::IMP::kernel::Particle *p)
 
static bool particle_is_instance (IMP::kernel::Model *m, IMP::kernel::ParticleIndex pi)
 
static Nuisance setup_particle (kernel::Model *m, ParticleIndex pi)
 
static Nuisance setup_particle (IMP::kernel::ParticleAdaptor decorator)
 
static Nuisance setup_particle (IMP::kernel::ParticleAdaptor decorator, double nuisance)
 
static Nuisance setup_particle (kernel::Model *m, ParticleIndex pi, double nuisance)
 
- Static Public Member Functions inherited from IMP::kernel::Decorator
static bool get_is_setup (Particle *p)
 Return true if the particle can be cast to the decorator. More...
 

Additional Inherited Members

- Protected Member Functions inherited from IMP::kernel::Decorator
 Decorator (kernel::Model *m, ParticleIndex pi)
 
 Decorator (ParticleAdaptor p)
 

Detailed Description

This is just syntactic sugar for a Nuisance bounded to be positive.

Definition at line 24 of file Scale.h.

Member Function Documentation

static Scale IMP::isd::Scale::decorate_particle ( ::IMP::kernel::Particle *  p)
static
Deprecated:
As of IMP release 2.1. See the IMP Deprecation Policy for more information about deprecation in IMP. Check explicitly instead.

Definition at line 29 of file Scale.h.

static bool IMP::isd::Scale::particle_is_instance ( ::IMP::kernel::Particle *  p)
static
Deprecated:
As of IMP release 2.1. See the IMP Deprecation Policy for more information about deprecation in IMP. Use get_is_setup() instead.

Definition at line 29 of file Scale.h.

static bool IMP::isd::Scale::particle_is_instance ( IMP::kernel::Model *  m,
IMP::kernel::ParticleIndex  pi 
)
static
Deprecated:
As of IMP release 2.1. See the IMP Deprecation Policy for more information about deprecation in IMP. Use get_is_setup() instead.

Definition at line 29 of file Scale.h.

static Scale IMP::isd::Scale::setup_particle ( kernel::Model *  m,
ParticleIndex  pi 
)
static

Setup the particle so it can be used with this decorator.

Definition at line 30 of file Scale.h.

static Scale IMP::isd::Scale::setup_particle ( kernel::Model *  m,
ParticleIndex  pi,
double  scale 
)
static

Setup the particle so it can be used with this decorator.

Definition at line 31 of file Scale.h.

The documentation for this class was generated from the following file: