IMP
2.1.1
The Integrative Modeling Platform
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Apply a PairFunction to a Pair. More...
#include <IMP/core/PairConstraint.h>
Public Member Functions | |
PairConstraint (PairModifier *before, PairDerivativeModifier *after, const ParticlePair &vt, std::string name="PairConstraint %1%") | |
PairConstraint (PairModifier *before, PairDerivativeModifier *after, kernel::Model *m, const ParticleIndexPair &vt, std::string name="PairConstraint %1%") | |
virtual std::string | get_type_name () const |
virtual ::IMP::base::VersionInfo | get_version_info () const |
Get information about the module and version of the object. | |
Public Member Functions inherited from IMP::kernel::Constraint | |
Constraint (kernel::Model *m, std::string name="Constraint %1%") | |
virtual void | do_after_evaluate (DerivativeAccumulator *da) |
virtual void | do_before_evaluate () |
Public Member Functions inherited from IMP::kernel::ScoreState | |
ScoreState (kernel::Model *m, std::string name) | |
ScoreState (kernel::Model *m) | |
ScoreState (std::string name="ScoreState %1%") | |
void | after_evaluate (DerivativeAccumulator *accpt) |
Do post evaluation work if needed. | |
void | before_evaluate () |
Force update of the structure. | |
ContainersTemp | get_input_containers () const |
ParticlesTemp | get_input_particles () const |
ContainersTemp | get_output_containers () const |
ParticlesTemp | get_output_particles () const |
Public Member Functions inherited from IMP::kernel::ModelObject | |
ModelObject (kernel::Model *m, std::string name) | |
ModelObject (std::string name) | |
virtual void | do_set_model (kernel::Model *) |
bool | get_has_dependencies () const |
Return whether this object has dependencies computed. | |
bool | get_has_required_score_states () const |
ModelObjectsTemp | get_inputs () const |
ModelObjectsTemps | get_interactions () const |
bool | get_is_part_of_model () const |
Model * | get_model () const |
ModelObjectsTemp | get_outputs () const |
const ScoreStatesTemp & | get_required_score_states () const |
void | set_has_dependencies (bool tf) |
void | set_has_required_score_states (bool tf) |
virtual void | set_model (kernel::Model *m) |
Public Member Functions inherited from IMP::base::Object | |
virtual void | clear_caches () |
virtual void | do_destroy () |
CheckLevel | get_check_level () const |
LogLevel | get_log_level () const |
void | set_check_level (CheckLevel l) |
void | set_log_level (LogLevel l) |
Set the logging level used in this object. More... | |
void | set_was_used (bool tf) const |
void | show (std::ostream &out=std::cout) const |
const std::string & | get_name () const |
void | set_name (std::string name) |
Protected Member Functions | |
virtual kernel::ModelObjectsTemp | do_get_inputs () const |
virtual kernel::ModelObjectsTemp | do_get_outputs () const |
void | do_update_attributes () |
void | do_update_derivatives (DerivativeAccumulator *da) |
Protected Member Functions inherited from IMP::kernel::ModelObject | |
virtual ModelObjectsTemps | do_get_interactions () const |
virtual void | handle_set_has_required_score_states (bool) |
Protected Member Functions inherited from IMP::base::Object | |
Object (std::string name) | |
Construct an object with the given name. More... | |
Object () | |
The score state is passed up to two PairModifiers, one to apply before evaluation and the other after. The one after should take a DerivativeAccumulator as its last argument for PairModifier::apply() and will only be called if the score was computed with derivatives.
Definition at line 31 of file PairConstraint.h.
IMP::core::PairConstraint::PairConstraint | ( | PairModifier * | before, |
PairDerivativeModifier * | after, | ||
const ParticlePair & | vt, | ||
std::string | name = "PairConstraint %1%" |
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Definition at line 43 of file PairConstraint.h.
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protectedvirtual |
Get any Particle, Container or other ModelObjects read by this during evaluation. If you read everything in a container, you can just return that container.
Implements IMP::kernel::ModelObject.
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protectedvirtual |
Get any Particle, Container or other ModelObjects changed by this during evaluation. This is only useful for ScoreStates, at the moment.
Implements IMP::kernel::ModelObject.