IMP::algebra::NearestNeighborD< D > Class Template Reference

#include <IMP/algebra/vector_search.h>

Inheritance diagram for IMP::algebra::NearestNeighborD< D >:

Public Member Functions
template<class It >
	NearestNeighborD (It b, It e, double epsilon=0)
	NearestNeighborD (const base::Vector< VectorD< D > > &vs, double epsilon=0)
Ints	get_in_ball (unsigned int i, double distance) const
Ints	get_in_ball (const VectorD< D > &pt, double distance) const
unsigned int	get_nearest_neighbor (const VectorD< D > &q) const
unsigned int	get_nearest_neighbor (unsigned int i) const
Ints	get_nearest_neighbors (unsigned int i, unsigned int k) const
Ints	get_nearest_neighbors (const algebra::VectorD< D > &v, unsigned int k) const
virtual std::string	get_type_name () const
virtual ::IMP::base::VersionInfo	get_version_info () const
	Get information about the module and version of the object.
void	set_query_log (std::string fname)
	Log the points and queries to a file for performance studies.
Public Member Functions inherited from IMP::base::Object
virtual void	clear_caches ()
virtual void	do_destroy ()
CheckLevel	get_check_level () const
LogLevel	get_log_level () const
void	set_check_level (CheckLevel l)
void	set_log_level (LogLevel l)
	Set the logging level used in this object. More...
void	set_was_used (bool tf) const
void	show (std::ostream &out=std::cout) const
const std::string &	get_name () const
void	set_name (std::string name)

Additional Inherited Members
Protected Member Functions inherited from IMP::base::Object
	Object (std::string name)
	Construct an object with the given name. More...
	Object ()

Detailed Description

template<int D>
class IMP::algebra::NearestNeighborD< D >

Build a structure for finding nearest neighbors. Different implementations are used depending on what optional dependencies are available. The class NearestNeighborD uses CGAL in order to improve its functionality. It will fall back on less good code without it. The class NearestNeighborD uses ANN in order to improve its functionality. It will fall back on less good code without it.

Definition at line 53 of file vector_search.h.

Member Function Documentation

template<int D>

Ints IMP::algebra::NearestNeighborD< D >::get_in_ball	(	unsigned int	i,
		double	distance
	)		const

Find all points within the provided distance.

Definition at line 148 of file vector_search.h.

template<int D>

Ints IMP::algebra::NearestNeighborD< D >::get_in_ball	(	const VectorD< D > &	pt,
		double	distance
	)		const

Find all points within the provided distance.

Definition at line 156 of file vector_search.h.

template<int D>

unsigned int IMP::algebra::NearestNeighborD< D >::get_nearest_neighbor

(

unsigned int

i

)

const

Search using the ith point in the input set.

Definition at line 108 of file vector_search.h.

template<int D>

Ints IMP::algebra::NearestNeighborD< D >::get_nearest_neighbors	(	unsigned int	i,
		unsigned int	k
	)		const

Search using the ith point in the input set. Return the k nearest neighbors.

Definition at line 122 of file vector_search.h.

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The documentation for this class was generated from the following file:

• vector_search.h