IMP::core::CentroidOfRefined Class Reference

Set the coordinates of the particle to be the centoid of the particles. More...

#include <IMP/core/CentroidOfRefined.h>

Inheritance diagram for IMP::core::CentroidOfRefined:

Public Member Functions
	CentroidOfRefined (Refiner *r, FloatKey weight=FloatKey(), FloatKeys ks=XYZ::get_xyz_keys())
	Set the keys ks to be the average of the refined particles.
virtual void	apply_index (kernel::Model *m, kernel::ParticleIndex a) const
virtual void	apply_indexes (kernel::Model *m, const ParticleIndexes &o, unsigned int lower_bound, unsigned int upper_bound) const
virtual kernel::ModelObjectsTemp	do_get_inputs (kernel::Model *m, const kernel::ParticleIndexes &pis) const
virtual kernel::ModelObjectsTemp	do_get_outputs (kernel::Model *m, const kernel::ParticleIndexes &pis) const
virtual std::string	get_type_name () const
virtual ::IMP::base::VersionInfo	get_version_info () const
	Get information about the module and version of the object.
Public Member Functions inherited from IMP::kernel::SingletonModifier
	SingletonModifier (std::string name="SingletonModifier %1%")
virtual void	apply (Particle *vt) const
Public Member Functions inherited from IMP::kernel::ParticleInputs
virtual ContainersTemp	get_input_containers (Particle *p) const
virtual ParticlesTemp	get_input_particles (Particle *p) const
ModelObjectsTemp	get_inputs (kernel::Model *m, const ParticleIndexes &pis) const
Public Member Functions inherited from IMP::kernel::ParticleOutputs
virtual ContainersTemp	get_output_containers (Particle *p) const
virtual ParticlesTemp	get_output_particles (Particle *p) const
ModelObjectsTemp	get_outputs (kernel::Model *m, const ParticleIndexes &pis) const
Public Member Functions inherited from IMP::base::Object
virtual void	clear_caches ()
virtual void	do_destroy ()
CheckLevel	get_check_level () const
LogLevel	get_log_level () const
void	set_check_level (CheckLevel l)
void	set_log_level (LogLevel l)
	Set the logging level used in this object. More...
void	set_was_used (bool tf) const
void	show (std::ostream &out=std::cout) const
const std::string &	get_name () const
void	set_name (std::string name)

Additional Inherited Members
Public Types inherited from IMP::kernel::SingletonModifier
typedef Particle *	Argument
typedef ParticleIndex	IndexArgument
Protected Member Functions inherited from IMP::base::Object
	Object (std::string name)
	Construct an object with the given name. More...
	Object ()

Detailed Description

An exception is thrown if there are no refined particles. The weight FloatKey can be FloatKey and then all the weights will be equal.

See Also

CoverRefined

DerivativesToRefined

DerivativesFromRefined

Definition at line 31 of file CentroidOfRefined.h.

Member Function Documentation

virtual void IMP::core::CentroidOfRefined::apply_index ( kernel::Model *  m, kernel::ParticleIndex  v  ) const

virtual

Apply the function to a single value

Reimplemented from IMP::kernel::SingletonModifier.

virtual void IMP::core::CentroidOfRefined::apply_indexes ( kernel::Model *  m, const ParticleIndexes &  o, unsigned int  lower_bound, unsigned int  upper_bound  ) const

virtual

Apply the function to a collection of ParticlesTemp If bounds are passed, only apply to ones between the upper and lower bounds.

Reimplemented from IMP::kernel::SingletonModifier.

Definition at line 46 of file CentroidOfRefined.h.

virtual kernel::ModelObjectsTemp IMP::core::CentroidOfRefined::do_get_inputs ( kernel::Model *  m, const kernel::ParticleIndexes &  pis  ) const

virtual

Overload this method to specify the inputs.

Reimplemented from IMP::kernel::ParticleInputs.

virtual kernel::ModelObjectsTemp IMP::core::CentroidOfRefined::do_get_outputs ( kernel::Model *  m, const kernel::ParticleIndexes &  pis  ) const

virtual

Overload this method to specify the outputs.

Reimplemented from IMP::kernel::ParticleOutputs.

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The documentation for this class was generated from the following file:

• CentroidOfRefined.h