|
IMP
2.0.0
The Integrative Modeling Platform
|
This is the complete list of members for IMP::kernel::Model, including all inherited members.
| add_attribute(TypeKey attribute_key, ParticleIndex particle, Type value) | IMP::kernel::Model | |
| add_cache_attribute(TypeKey attribute_key, ParticleIndex particle, Type value) | IMP::kernel::Model | |
| add_data(ModelKey mk, base::Object *o) (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| add_particle(std::string name) | IMP::kernel::Model | |
| add_score_state(ScoreState *obj) (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| add_score_states(const ScoreStates &objs) (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| add_undecorator(ParticleIndex pi, Undecorator *d) | IMP::kernel::Model | |
| clear_all_statistics() (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| clear_caches() | IMP::base::Object | virtual |
| clear_particle_caches(ParticleIndex pi) | IMP::kernel::Model | |
| clear_score_states() (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| create_model_scoring_function() | IMP::kernel::Model | |
| get_attribute(TypeKey attribute_key, ParticleIndex particle) | IMP::kernel::Model | |
| get_data(ModelKey mk) const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| get_gather_statistics() const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| get_has_attribute(TypeKey attribute_key, ParticleIndex particle) const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| get_has_data(ModelKey mk) const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| get_has_score_states() (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| get_model_objects() const | IMP::kernel::Model | |
| get_name() const (defined in IMP::base::Object) | IMP::base::Object | |
| get_number_of_particles() const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| get_number_of_score_states() const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| get_particle(ParticleIndex p) const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| get_particles() const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| get_restraint_statistics(Restraint *r) const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| get_score_state(unsigned int i) const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| get_score_states() const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| get_version_info() const =0 | IMP::base::Object | pure virtual |
| Model(std::string name="Model %1%") | IMP::kernel::Model | |
| ModelsTemp typedef | IMP::kernel::Model | related |
| NonCopyable() (defined in IMP::base::NonCopyable) | IMP::base::NonCopyable | protected |
| Object(std::string name) | IMP::base::Object | protected |
| ObjectsTemp typedef | IMP::base::Object | related |
| particles_begin() const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| particles_end() const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| remove_attribute(TypeKey attribute_key, ParticleIndex particle) | IMP::kernel::Model | |
| remove_data(ModelKey mk) (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| remove_particle(ParticleIndex pi) | IMP::kernel::Model | |
| remove_score_state(ScoreState *d) (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| remove_score_states(const ScoreStates &d) (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| reserve_score_states(unsigned int sz) (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| set_attribute(TypeKey attribute_key, ParticleIndex particle, Type value) | IMP::kernel::Model | |
| set_check_level(CheckLevel l) | IMP::base::Object | |
| set_gather_statistics(bool tf) (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| set_is_optimized(TypeKey attribute_key, ParticleIndex particle, bool true_or_false) | IMP::kernel::Model | |
| set_log_level(LogLevel l) | IMP::base::Object | |
| set_name(std::string name) (defined in IMP::base::Object) | IMP::base::Object | |
| set_score_states(const ScoreStates &ps) (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| set_score_states_order(const ScoreStates &objs) (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| set_was_used(bool tf) const | IMP::base::Object | |
| show(std::ostream &out=std::cout) const (defined in IMP::base::Object) | IMP::base::Object | |
| show_all_statistics(std::ostream &out=std::cout) const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| show_restraint_score_statistics(std::ostream &out=std::cout) const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| show_restraint_time_statistics(std::ostream &out=std::cout) const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| show_score_state_time_statistics(std::ostream &out=std::cout) const (defined in IMP::kernel::Model) | IMP::kernel::Model | |
| update() | IMP::kernel::Model |