Some recent changes of note:
- the IMP.statistics module can now be used in other modules as it no longer depends on IMP.em
- IMP graphs in python now have a method show_dotty() which displays the graph in an X-window. Welcome to the 1980s.
- IMP.domino is now officially deprecated. If you want to build it, add "localmodules='True'" to your config
- the typemaps have been fixed so that now passing Objects by things other than pointers and values not be value (or const ref) is likely to produce visible compilation errors.
- IMP::atom::Hierarchy requires radii on its leaves
- IMP::atom::read_pdb adds radii to the atoms
- IMP::helper was merged into IMP::restrainer as all the functionality there was primarily to provide support for restrainer
- IMP::domino2::SubsetEvaluatorTable was removed. Pass the model and IMP::domino2::ParticleStatesTable to the IMP::domino2::RestraintScoreSubsetFilterTable instead.
- IMP::atom::Selection was added to allow specification of parts of IMP::atom::Hierarchy using biological sorts of names. A few functions to create restraints from them were added too.