On 02/10/2010 11:58 AM, Daniel Russel wrote:
Indeed, that is what it should be (and is done in other similar files, eg the XCode xml config file). If they are, then we don't have a problem since the script can use the get_example_path to find the xml file and all the data files will be in the same dir as the xml file. The context for finding data files in the xml file is the xml file, not whatever directory the user happens to call things from.
That pronouncement makes it sound like such behavior is some kind of standard, which it of course is not, but I agree that it makes sense for IMP. It should be straightforward for Elina to modify the Restrainer code to do that.
Ben -- ben@salilab.org http://salilab.org/~ben/ "It is a capital mistake to theorize before one has data." - Sir Arthur Conan Doyle