Javier Ángel Velázquez Muriel wrote:
Dealing with a PDB file that has terminal oxigens OXT, they are not recognized properly and I obtain these warnings:WARNING Atom not found "OXT" residue "ARG" WARNING Radius not found for type ""I guess that is something trivial to consider OXTs as oxigens and assign them the radius of an O.
Sounds like a bug to me. Open a bug in the bug tracker at https://salilab.org/imp/bugs/ so it is tracked and fixed.
Ben -- ben@salilab.org http://salilab.org/~ben/ "It is a capital mistake to theorize before one has data." - Sir Arthur Conan Doyle